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Lag0001928 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001928
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr4:37132714..37135174
RNA-Seq ExpressionLag0001928
SyntenyLag0001928
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066503.1 uncharacterized protein E6C27_scaffold25G00500 [Cucumis melo var. makuwa]1.6e-0427.78Show/hide
Query:  YDGVWDSCHQYTGFKTSTMCVDSNCTFEQLVNCINRKLSSQNSGKIHCISLYSNISGKPTVLRLCEDRDVAWFLFSISNSNINEFSIIVD
        +DG W    +Y  ++   + V    +F++ VNCI+R+L   +   +  +++YS       ++R+ +D+DV+W +  IS  + N+  I+VD
Subjt:  YDGVWDSCHQYTGFKTSTMCVDSNCTFEQLVNCINRKLSSQNSGKIHCISLYSNISGKPTVLRLCEDRDVAWFLFSISNSNINEFSIIVD

TrEMBL top hitse value%identityAlignment
A0A5A7VEN5 Uncharacterized protein7.6e-0527.78Show/hide
Query:  YDGVWDSCHQYTGFKTSTMCVDSNCTFEQLVNCINRKLSSQNSGKIHCISLYSNISGKPTVLRLCEDRDVAWFLFSISNSNINEFSIIVD
        +DG W    +Y  ++   + V    +F++ VNCI+R+L   +   +  +++YS       ++R+ +D+DV+W +  IS  + N+  I+VD
Subjt:  YDGVWDSCHQYTGFKTSTMCVDSNCTFEQLVNCINRKLSSQNSGKIHCISLYSNISGKPTVLRLCEDRDVAWFLFSISNSNINEFSIIVD

A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like8.4e-0429.1Show/hide
Query:  MSSIPISLWYDGVWDSCHQYTGFKTSTMCVDSNCTFEQLVNCINRKL---SSQNSGKIHCISLYSNISGKPTVLRLCEDRDVAWFLFSISNSNINEFSII
        M  +PI +++ G WD  + Y  +KT ++ VD   +FE  V+ I R++   +S +S ++  +  Y  I+   TV+++ ED+DV WFL S+    I    ++
Subjt:  MSSIPISLWYDGVWDSCHQYTGFKTSTMCVDSNCTFEQLVNCINRKL---SSQNSGKIHCISLYSNISGKPTVLRLCEDRDVAWFLFSISNSNINEFSII

Query:  ------VDFVQLRLLPISPPSESSLRSSSPSSSV
              V  + L    +      +L S  PSSS+
Subjt:  ------VDFVQLRLLPISPPSESSLRSSSPSSSV

A0A5D3DDR3 MuDRA-like transposase6.4e-0423.58Show/hide
Query:  DGVWDSCHQYTGFKTSTMCVDSNCTFEQLVNCINRKLSSQNSGKIHCISLYSNISGKPTVLRLCEDRDVAWFLFSISNSNINEFSIIVDFVQLRLLPISP
        DG W    +Y  ++   + V  + +F++LVNCI  ++   +   +  +++Y N      ++R+ +D+ V+W +  +S  + N+  ++VD+V    +  +P
Subjt:  DGVWDSCHQYTGFKTSTMCVDSNCTFEQLVNCINRKLSSQNSGKIHCISLYSNISGKPTVLRLCEDRDVAWFLFSISNSNINEFSIIVDFVQLRLLPISP

Query:  PSESSL
           S L
Subjt:  PSESSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCATTCCGATTTCTTTATGGTACGATGGTGTGTGGGATAGTTGCCATCAATACACTGGATTCAAGACATCAACAATGTGCGTAGATTCTAATTGTACATTCGA
ACAACTCGTCAATTGCATTAATCGTAAGCTCTCATCTCAGAATAGTGGAAAAATTCACTGTATCTCTTTGTACAGCAACATCTCTGGTAAGCCCACTGTACTTAGGCTTT
GTGAGGATAGAGACGTTGCCTGGTTCTTATTTTCCATATCCAACAGCAACATCAATGAATTTAGCATCATAGTGGATTTTGTCCAGCTTCGTCTTCTCCCAATTTCTCCT
CCATCTGAATCTTCTTTGCGTTCATCTTCTCCATCGTCTTCAGTACGTTCTGTTCAGTTAATTTCGGTTTGCTTTCTTCTTTCGATTATATCATTTCGCACACTTGTGGA
ACGAAATCATCCCCTCGAGATGAAGAACGAAAAAGTAGAAAAAGTAGATTATGAACATGTGGAGGAGGAGAAAAAGACAAAAAGGAAATTAAATTATAAAGGAGAGAGCT
CCAAGAAGAAACATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCATTCCGATTTCTTTATGGTACGATGGTGTGTGGGATAGTTGCCATCAATACACTGGATTCAAGACATCAACAATGTGCGTAGATTCTAATTGTACATTCGA
ACAACTCGTCAATTGCATTAATCGTAAGCTCTCATCTCAGAATAGTGGAAAAATTCACTGTATCTCTTTGTACAGCAACATCTCTGGTAAGCCCACTGTACTTAGGCTTT
GTGAGGATAGAGACGTTGCCTGGTTCTTATTTTCCATATCCAACAGCAACATCAATGAATTTAGCATCATAGTGGATTTTGTCCAGCTTCGTCTTCTCCCAATTTCTCCT
CCATCTGAATCTTCTTTGCGTTCATCTTCTCCATCGTCTTCAGTACGTTCTGTTCAGTTAATTTCGGTTTGCTTTCTTCTTTCGATTATATCATTTCGCACACTTGTGGA
ACGAAATCATCCCCTCGAGATGAAGAACGAAAAAGTAGAAAAAGTAGATTATGAACATGTGGAGGAGGAGAAAAAGACAAAAAGGAAATTAAATTATAAAGGAGAGAGCT
CCAAGAAGAAACATCCTTGA
Protein sequenceShow/hide protein sequence
MSSIPISLWYDGVWDSCHQYTGFKTSTMCVDSNCTFEQLVNCINRKLSSQNSGKIHCISLYSNISGKPTVLRLCEDRDVAWFLFSISNSNINEFSIIVDFVQLRLLPISP
PSESSLRSSSPSSSVRSVQLISVCFLLSIISFRTLVERNHPLEMKNEKVEKVDYEHVEEEKKTKRKLNYKGESSKKKHP