; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001943 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001943
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationchr4:37366317..37369460
RNA-Seq ExpressionLag0001943
SyntenyLag0001943
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155423.1 transcription factor bHLH153-like isoform X1 [Momordica charantia]1.6e-6290.85Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG
        MEQKRS CSVDE YLISL +KRHK  FSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP SRIQEIEPWSLG
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG

Query:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSVLQLQ
        SNGLCLVP ASTS+IASCNGADIWAPVKTSSS  EK+VL+LQ
Subjt:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSVLQLQ

XP_022158392.1 transcription factor bHLH153-like isoform X1 [Momordica charantia]6.6e-4874.29Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPW--S
        MEQKR+ CSVDES L SLT KRHKTDFSIS+K+RK+KLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TPT ++QE+EP+  S
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPW--S

Query:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV
        L + GLCLVP + T+ +A  NGADIWAPVKT+S   EK++
Subjt:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV

XP_022158393.1 transcription factor bHLH153-like isoform X2 [Momordica charantia]6.6e-4874.29Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPW--S
        MEQKR+ CSVDES L SLT KRHKTDFSIS+K+RK+KLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TPT ++QE+EP+  S
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPW--S

Query:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV
        L + GLCLVP + T+ +A  NGADIWAPVKT+S   EK++
Subjt:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV

XP_038906434.1 transcription factor bHLH153-like isoform X1 [Benincasa hispida]4.3e-4775Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEP--WS
        MEQKRS CSVDES L SLT+KRHKTDFSIS+K+RK+KLGERI+ALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TPT  +QE+EP   S
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEP--WS

Query:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV
        L S GLCLVP + T+ +A  NGADIWAPVKT S   EK +
Subjt:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV

XP_038906435.1 transcription factor bHLH153-like isoform X2 [Benincasa hispida]4.3e-4775Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEP--WS
        MEQKRS CSVDES L SLT+KRHKTDFSIS+K+RK+KLGERI+ALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TPT  +QE+EP   S
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEP--WS

Query:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV
        L S GLCLVP + T+ +A  NGADIWAPVKT S   EK +
Subjt:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV

TrEMBL top hitse value%identityAlignment
A0A1S3BX75 transcription factor bHLH113-like isoform X43.5e-4775Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEP--WS
        MEQKRS CSVDES L SLT KRHKTDFSIS+K+RK+KLGERI+ALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TPT  +QE+EP   S
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEP--WS

Query:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV
        L S GLCLVP + T+ +A  NGADIWAPVKT S   EK +
Subjt:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV

A0A5D3CZQ3 Transcription factor bHLH113-like isoform X23.5e-4775Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEP--WS
        MEQKRS CSVDES L SLT KRHKTDFSIS+K+RK+KLGERI+ALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TPT  +QE+EP   S
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEP--WS

Query:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV
        L S GLCLVP + T+ +A  NGADIWAPVKT S   EK +
Subjt:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV

A0A6J1DMX2 transcription factor bHLH153-like isoform X17.8e-6390.85Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG
        MEQKRS CSVDE YLISL +KRHK  FSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTP SRIQEIEPWSLG
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG

Query:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSVLQLQ
        SNGLCLVP ASTS+IASCNGADIWAPVKTSSS  EK+VL+LQ
Subjt:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSVLQLQ

A0A6J1DVY8 transcription factor bHLH153-like isoform X23.2e-4874.29Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPW--S
        MEQKR+ CSVDES L SLT KRHKTDFSIS+K+RK+KLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TPT ++QE+EP+  S
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPW--S

Query:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV
        L + GLCLVP + T+ +A  NGADIWAPVKT+S   EK++
Subjt:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV

A0A6J1DX43 transcription factor bHLH153-like isoform X13.2e-4874.29Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPW--S
        MEQKR+ CSVDES L SLT KRHKTDFSIS+K+RK+KLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQ+KVL APYL+ TPT ++QE+EP+  S
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPW--S

Query:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV
        L + GLCLVP + T+ +A  NGADIWAPVKT+S   EK++
Subjt:  LGSNGLCLVPTASTSQIASCNGADIWAPVKTSSSSSEKSV

SwissProt top hitse value%identityAlignment
Q7XJU1 Transcription factor bHLH1543.2e-3762.69Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHK-TDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSL
        ME KR+  S++++ +     KRHK +D S S+K+RK+KL ERI ALQQLVSPYGKTDTASVLLE M+YIQFL EQ+KVL APYL+ TP++  +E+E +SL
Subjt:  MEQKRSSCSVDESYLISLTTKRHK-TDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSL

Query:  GSNGLCLVPTASTSQIASCNGADIWAPVKTSSSS
         S GLCLVP   TS++A  NGADIWAPVKT +SS
Subjt:  GSNGLCLVPTASTSQIASCNGADIWAPVKTSSSS

Q7XJU2 Transcription factor bHLH1534.9e-3862.12Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG
        ME KR+ CS+ ES     + KRHK+D S S+K+RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  +E+E +SL 
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG

Query:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS
        + GLCLVP  +T  +A  NGADIWAPVKT  S
Subjt:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS

Q8GXT3 Transcription factor bHLH1232.5e-1848.04Show/hide
Query:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYL---------ERTPTSRIQEIEPWSLGSNGLCLVPTASTSQIASCNGADIW
        RKEK+G+RI ALQQLVSP+GKTD ASVL EA+EYI+FLH+Q+  L  PY+         +   ++ ++  E   L S GLCLVP +ST  +      D W
Subjt:  RKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYL---------ERTPTSRIQEIEPWSLGSNGLCLVPTASTSQIASCNGADIW

Query:  AP
         P
Subjt:  AP

Q94JL3 Transcription factor bHLH1121.1e-1849.06Show/hide
Query:  KDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQ-----------EIEPWSLGSNGLCLVPTASTSQIASCNG
        K RKE L ++I +LQQLVSP+GKTDTASVL EA+EYI+FLH+Q+ VL  PY+++  +++ Q           E E   L  +GLCLVP +ST  +A+   
Subjt:  KDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQ-----------EIEPWSLGSNGLCLVPTASTSQIASCNG

Query:  ADIWAP
        AD W P
Subjt:  ADIWAP

Q9LT67 Transcription factor bHLH1134.2e-2150Show/hide
Query:  KRHKTDFSIS-AKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLER-------TPTSRIQEIEPWSLGSNGLCLVPTAST
        KR++   S+  AK RKE+LGERI ALQQLVSPYGKTD ASVL EAM YI+FL +QI+VL +PYL              +  ++   L S GLCLVP +ST
Subjt:  KRHKTDFSIS-AKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLER-------TPTSRIQEIEPWSLGSNGLCLVPTAST

Query:  SQIASCNGADIWAPVKTSSSSS
          + + NGAD W+P     ++S
Subjt:  SQIASCNGADIWAPVKTSSSSS

Arabidopsis top hitse value%identityAlignment
AT1G05710.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.5e-3962.12Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG
        ME KR+ CS+ ES     + KRHK+D S S+K+RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  +E+E +SL 
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG

Query:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS
        + GLCLVP  +T  +A  NGADIWAPVKT  S
Subjt:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS

AT1G05710.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.5e-3962.12Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG
        ME KR+ CS+ ES     + KRHK+D S S+K+RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  +E+E +SL 
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG

Query:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS
        + GLCLVP  +T  +A  NGADIWAPVKT  S
Subjt:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS

AT1G05710.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.5e-3962.12Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG
        ME KR+ CS+ ES     + KRHK+D S S+K+RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  +E+E +SL 
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG

Query:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS
        + GLCLVP  +T  +A  NGADIWAPVKT  S
Subjt:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS

AT1G05710.5 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.5e-3962.12Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG
        ME KR+ CS+ ES     + KRHK+D S S+K+RK+K+GERI ALQQ+VSPYGKTDTASVLL+AM YI+FLHEQ+KVL APYL+  P +  +E+E +SL 
Subjt:  MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLG

Query:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS
        + GLCLVP  +T  +A  NGADIWAPVKT  S
Subjt:  SNGLCLVPTASTSQIASCNGADIWAPVKTSSS

AT2G31730.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.3e-3862.69Show/hide
Query:  MEQKRSSCSVDESYLISLTTKRHK-TDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSL
        ME KR+  S++++ +     KRHK +D S S+K+RK+KL ERI ALQQLVSPYGKTDTASVLLE M+YIQFL EQ+KVL APYL+ TP++  +E+E +SL
Subjt:  MEQKRSSCSVDESYLISLTTKRHK-TDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSL

Query:  GSNGLCLVPTASTSQIASCNGADIWAPVKTSSSS
         S GLCLVP   TS++A  NGADIWAPVKT +SS
Subjt:  GSNGLCLVPTASTSQIASCNGADIWAPVKTSSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAGAAAAGAAGCTCTTGCTCTGTTGATGAAAGCTATCTCATTTCTCTCACTACCAAAAGGCACAAGACTGATTTTTCAATTTCAGCTAAGGACAGGAAGGAGAA
GCTGGGTGAAAGAATTGTGGCTCTGCAACAACTTGTTTCACCATATGGAAAGACAGATACTGCTTCTGTTCTTCTGGAGGCAATGGAATACATACAATTTCTTCATGAAC
AGATTAAGGTGTTGATTGCTCCATACCTAGAAAGAACCCCAACCTCTAGAATACAGGAGATTGAGCCATGGAGCCTGGGAAGCAATGGCTTATGTCTGGTTCCGACCGCC
TCAACTTCTCAAATTGCTAGCTGCAATGGTGCAGACATCTGGGCTCCTGTCAAGACCTCTTCCTCCAGCTCTGAGAAAAGCGTTTTGCAATTACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAGAAAAGAAGCTCTTGCTCTGTTGATGAAAGCTATCTCATTTCTCTCACTACCAAAAGGCACAAGACTGATTTTTCAATTTCAGCTAAGGACAGGAAGGAGAA
GCTGGGTGAAAGAATTGTGGCTCTGCAACAACTTGTTTCACCATATGGAAAGACAGATACTGCTTCTGTTCTTCTGGAGGCAATGGAATACATACAATTTCTTCATGAAC
AGATTAAGGTGTTGATTGCTCCATACCTAGAAAGAACCCCAACCTCTAGAATACAGGAGATTGAGCCATGGAGCCTGGGAAGCAATGGCTTATGTCTGGTTCCGACCGCC
TCAACTTCTCAAATTGCTAGCTGCAATGGTGCAGACATCTGGGCTCCTGTCAAGACCTCTTCCTCCAGCTCTGAGAAAAGCGTTTTGCAATTACAATGA
Protein sequenceShow/hide protein sequence
MEQKRSSCSVDESYLISLTTKRHKTDFSISAKDRKEKLGERIVALQQLVSPYGKTDTASVLLEAMEYIQFLHEQIKVLIAPYLERTPTSRIQEIEPWSLGSNGLCLVPTA
STSQIASCNGADIWAPVKTSSSSSEKSVLQLQ