; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001944 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001944
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionselenoprotein F-like
Genome locationchr4:37371490..37375656
RNA-Seq ExpressionLag0001944
SyntenyLag0001944
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592972.1 Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]1.1e-8190.06Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VK+PAT V +AA AAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVK+QYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_008460012.1 PREDICTED: 15 kDa selenoprotein [Cucumis melo]5.8e-8391.23Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ L GV  PATAVT+  AAAAIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEE+KDQFPSVKVQY FNSPPKL++LDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_022960129.1 selenoprotein F-like [Cucurbita moschata]6.4e-8290.06Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VKKPAT V +AA AAAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVK+QYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_023004122.1 selenoprotein F-like [Cucurbita maxima]6.4e-8290.64Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VKKPAT V +AA  AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVKVQYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_038875398.1 selenoprotein F [Benincasa hispida]6.2e-8592.4Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ L GV+ PATAVT+A AA  +IFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKL++LDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

TrEMBL top hitse value%identityAlignment
A0A0A0KA30 Sep15_SelM domain-containing protein2.9e-8088.3Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ L GV   A AVT+A  A AIIFI+SMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIE++KDQFPSVKVQY FNSPPKL++LDD+GQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A1S3CC00 15 kDa selenoprotein2.8e-8391.23Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ L GV  PATAVT+  AAAAIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEE+KDQFPSVKVQY FNSPPKL++LDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A5A7T9G4 15 kDa selenoprotein1.0e-8085.71Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVSDCLKCCSEDSDDATSKIT
        MQ L GV  PATAVT+A AA AIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ           ELV+DCLKCC+EDSDDATSKIT
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVSDCLKCCSEDSDDATSKIT

Query:  YSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        YSGAVLEVCMRKLVFYPEIVGFIEE+KDQFPSVKVQY FNSPPKL++LDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  YSGAVLEVCMRKLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A6J1HA08 selenoprotein F-like3.1e-8290.06Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VKKPAT V +AA AAAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVK+QYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A6J1KPJ2 selenoprotein F-like3.1e-8290.64Show/hide
Query:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR
        MQ    VKKPAT V +AA  AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC+EDSDDATSKITYSGAVLEVCMR
Subjt:  MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEEEKD+FPSVKVQYIFNSPPKL +LDDEGQHKESIRIDNWKREHILQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F1.8e-1836.36Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV
        + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV

Query:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        +LDD G   E + I  W  + + +FL EK++R
Subjt:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR

A8YXY3 Selenoprotein F4.7e-1936.36Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV

Query:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        +LDD G   E + I  W  + + +FL EK++R
Subjt:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR

O60613 Selenoprotein F8.0e-1936.36Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV

Query:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        +LDD G   E + I  W  + + +FL EK++R
Subjt:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Q802F3 Selenoprotein F1.8e-1836.36Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LEVC  KL  +P++  F+  +K + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLV

Query:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        +LDD G   E + I  W  + + +FL EK++R
Subjt:  MLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Q923V8 Selenoprotein F9.8e-1734.36Show/hide
Query:  GVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFY
        G  +PA  + L  A A   F A   L     + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LEVC  KL  +
Subjt:  GVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFY

Query:  PEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        P++  F+  +K + F  ++++Y+  S P L +LDD G   E + I  W  + + +FL EK++R
Subjt:  PEIVGFIEEEKDQ-FPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein3.1e-6671.34Show/hide
Query:  VKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYP
        +K+   A  +  +A  I+ +AS   A  KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELVSDCLKCC++DS+D+ SK+TYSGA+LEVCMRKLVFYP
Subjt:  VKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYP

Query:  EIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSA
        EIVGFIEEEK++FPSVKVQYIFNSPPKL+MLD++G+HKESIRIDNWKREH+LQ+++EKVK ++A
Subjt:  EIVGFIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTTCTCAGAGGTGTAAAGAAGCCGGCCACGGCGGTGACGCTGGCGGCAGCGGCAGCGGCGATAATTTTCATAGCGTCAATGCCGTTGGCTTGGTCAAAGGAGCA
ACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCCCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTGTCAGACTGTT
TGAAGTGTTGCTCGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGC
TTCATCGAAGAAGAAAAGGATCAATTCCCTTCGGTTAAGGTCCAATATATCTTCAACTCTCCGCCGAAGCTGGTTATGCTGGATGATGAGGGCCAACATAAAGAAAGCAT
CAGGATTGACAATTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTTCTCAGAGGTGTAAAGAAGCCGGCCACGGCGGTGACGCTGGCGGCAGCGGCAGCGGCGATAATTTTCATAGCGTCAATGCCGTTGGCTTGGTCAAAGGAGCA
ACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCCCTCTGTTCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTGTCAGACTGTT
TGAAGTGTTGCTCGGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTGTGCTGGAGGTCTGCATGAGGAAACTAGTTTTCTATCCTGAAATTGTTGGC
TTCATCGAAGAAGAAAAGGATCAATTCCCTTCGGTTAAGGTCCAATATATCTTCAACTCTCCGCCGAAGCTGGTTATGCTGGATGATGAGGGCCAACATAAAGAAAGCAT
CAGGATTGACAATTGGAAACGTGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAA
Protein sequenceShow/hide protein sequence
MQFLRGVKKPATAVTLAAAAAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCSEDSDDATSKITYSGAVLEVCMRKLVFYPEIVG
FIEEEKDQFPSVKVQYIFNSPPKLVMLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI