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Lag0001946 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001946
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionACT domain-containing protein ACR1-like
Genome locationchr4:37397081..37400011
RNA-Seq ExpressionLag0001946
SyntenyLag0001946
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587800.1 Protein TSS, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1354.44Show/hide
Query:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA
        MC   RLGQFYEFFSFSHLT P+Q     S  FL+D        +       K       ++  YP GKHLLLNHSLVGLLQQISRAFDA
Subjt:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA

KAG7035697.1 Protein TSS [Cucurbita argyrosperma subsp. argyrosperma]5.6e-1354.44Show/hide
Query:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA
        MC   RLGQFYEFFSFSHLT P+Q     S  FL+D        +       K       ++  YP GKHLLLNHSLVGLLQQISRAFDA
Subjt:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA

XP_023001818.1 protein TSS [Cucurbita maxima]5.6e-1354.44Show/hide
Query:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA
        MC   RLGQFYEFFSFSHLT P+Q     S  FL+D        +       K       ++  YP GKHLLLNHSLVGLLQQISRAFDA
Subjt:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA

XP_023531150.1 protein TSS [Cucurbita pepo subsp. pepo]5.6e-1354.44Show/hide
Query:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA
        MC   RLGQFYEFFSFSHLT P+Q     S  FL+D        +       K       ++  YP GKHLLLNHSLVGLLQQISRAFDA
Subjt:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA

XP_038882593.1 ACT domain-containing protein ACR1 [Benincasa hispida]6.6e-1495.35Show/hide
Query:  METVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRS
        METVYQPYYVDPQLELLIERIYPPRVCI NDTFQDCTLVKV S
Subjt:  METVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRS

TrEMBL top hitse value%identityAlignment
A0A0A0KIJ9 Uncharacterized protein3.5e-1374.55Show/hide
Query:  VQSYFREKIDMMETVY-QPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRS
        + ++  EK + MET+Y QPY+VDPQLELLIERIYPPRVCI NDTFQDCTLVKV S
Subjt:  VQSYFREKIDMMETVY-QPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRS

A0A6J1EF04 protein TSS4.6e-1352.13Show/hide
Query:  MCSLLRLGQFYEFFSFSHLTSPVQ-------------CESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA
        MC   RLGQFYEFFSFSHLT P+Q              E   F +D+ V       K       ++  YP GKHLLLNHSLVGLLQQISRAFDA
Subjt:  MCSLLRLGQFYEFFSFSHLTSPVQ-------------CESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA

A0A6J1GE07 ACT domain-containing protein ACR1-like1.0e-1288.64Show/hide
Query:  MMETVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRS
        MMETVYQPY VDPQLELLIERIYPPRVCI NDTF DCTL+KV S
Subjt:  MMETVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRS

A0A6J1IS69 ACT domain-containing protein ACR1-like1.0e-1288.64Show/hide
Query:  MMETVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRS
        MMETVYQPY VDPQLELLIERIYPPRVCI NDTF DCTL+KV S
Subjt:  MMETVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRS

A0A6J1KRN6 protein TSS2.7e-1354.44Show/hide
Query:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA
        MC   RLGQFYEFFSFSHLT P+Q     S  FL+D        +       K       ++  YP GKHLLLNHSLVGLLQQISRAFDA
Subjt:  MCSLLRLGQFYEFFSFSHLTSPVQC---ESSVFLLD------IDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDA

SwissProt top hitse value%identityAlignment
F4IDW9 Protein PARTING DANCERS2.2e-0452.38Show/hide
Query:  AQAFDRVQKLKKQLANFYVVVVLPTKEQNDSFVQSYFREKID
        A  F RV++LK Q A  YVV  L TKEQ+DSF++SYF+ +++
Subjt:  AQAFDRVQKLKKQLANFYVVVVLPTKEQNDSFVQSYFREKID

F4JKH6 Protein TSS7.1e-1145.1Show/hide
Query:  MCSLLRLGQFYEFFSFSHLTSPVQC-------------ESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDAQAFDRV
        MC   RLGQFYEFFSFS+LT P+Q                 +F +DI V       K       +   YP GK  LL HSLV LLQQISR FDA A+D +
Subjt:  MCSLLRLGQFYEFFSFSHLTSPVQC-------------ESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDAQAFDRV

Query:  QK
         K
Subjt:  QK

O49285 ACT domain-containing protein ACR36.4e-0445.28Show/hide
Query:  METVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV
        M  VY PY+ DP+ E L  RI PP V I N + ++CTLVKV S++     ++V
Subjt:  METVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV

Q6L5B5 Protein PARTING DANCERS homolog1.7e-0436.36Show/hide
Query:  DAQAFDRVQKLKKQLANFYVVVVLPTKEQNDSFVQSYFREKIDMMETVYQPYYVDPQL--ELLIERIYPPRVCIGND
        +   F RV  LK+QL + YVVV +PTKEQN+SF +SY +  + +    + P   DP++  E +++  +   VC   D
Subjt:  DAQAFDRVQKLKKQLANFYVVVVLPTKEQNDSFVQSYFREKIDMMETVYQPYYVDPQL--ELLIERIYPPRVCIGND

Q9FHP1 ACT domain-containing protein ACR14.7e-0748.15Show/hide
Query:  MMETVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV
        MME  YQP  +D ++E L+ERI PPRVC+ ND+  +CTL+KV S +     +D+
Subjt:  MMETVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV

Arabidopsis top hitse value%identityAlignment
AT1G01320.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-0740Show/hide
Query:  SLLRLGQFYEFFSFSHLTSPVQ------------CESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFD
        S  +LG FYEFFS +HLT P+Q                  LL IDV   C     +   C ++  Y +GK  ++ H+LV LL+QISRAFD
Subjt:  SLLRLGQFYEFFSFSHLTSPVQ------------CESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFD

AT1G01320.2 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-0740Show/hide
Query:  SLLRLGQFYEFFSFSHLTSPVQ------------CESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFD
        S  +LG FYEFFS +HLT P+Q                  LL IDV   C     +   C ++  Y +GK  ++ H+LV LL+QISRAFD
Subjt:  SLLRLGQFYEFFSFSHLTSPVQ------------CESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFD

AT1G12790.1 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1.6e-0552.38Show/hide
Query:  AQAFDRVQKLKKQLANFYVVVVLPTKEQNDSFVQSYFREKID
        A  F RV++LK Q A  YVV  L TKEQ+DSF++SYF+ +++
Subjt:  AQAFDRVQKLKKQLANFYVVVVLPTKEQNDSFVQSYFREKID

AT4G28080.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.0e-1245.1Show/hide
Query:  MCSLLRLGQFYEFFSFSHLTSPVQC-------------ESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDAQAFDRV
        MC   RLGQFYEFFSFS+LT P+Q                 +F +DI V       K       +   YP GK  LL HSLV LLQQISR FDA A+D +
Subjt:  MCSLLRLGQFYEFFSFSHLTSPVQC-------------ESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDAQAFDRV

Query:  QK
         K
Subjt:  QK

AT5G65890.1 ACT domain repeat 13.4e-0848.15Show/hide
Query:  MMETVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV
        MME  YQP  +D ++E L+ERI PPRVC+ ND+  +CTL+KV S +     +D+
Subjt:  MMETVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTCGCTGCTGCGACTTGGGCAGTTTTATGAGTTCTTCTCCTTCTCTCATCTGACATCACCAGTTCAATGTGAGTCATCTGTGTTTCTTCTCGATATTGACGTTGG
TGGTTCGTGTTTGCAATGGAAAACCAACAACAATTGTTGCTTCAAGGAAAGGGTTTACCCTGTTGGGAAACATCTTCTTCTTAATCATTCCTTGGTGGGTTTGTTGCAGC
AGATAAGCAGAGCATTTGATGCTCAAGCTTTTGACAGAGTTCAAAAGTTGAAGAAGCAGTTAGCAAATTTCTATGTTGTTGTTGTCCTTCCAACCAAGGAGCAGAATGAT
TCATTTGTACAATCTTACTTCAGGGAAAAGATAGATATGATGGAAACTGTGTATCAACCTTATTACGTGGATCCCCAGTTGGAATTACTCATTGAAAGAATTTACCCACC
CAGAGTTTGCATAGGCAATGATACCTTTCAGGATTGCACGCTTGTGAAGGTTCGATCCCTATCTTCAAAGTTCTTCAAGATCGATGTACATGAGCAAGATTCTGCCGAAA
AGAATGGATGCTGCATGTACGAGAATATTTGTTTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTCGCTGCTGCGACTTGGGCAGTTTTATGAGTTCTTCTCCTTCTCTCATCTGACATCACCAGTTCAATGTGAGTCATCTGTGTTTCTTCTCGATATTGACGTTGG
TGGTTCGTGTTTGCAATGGAAAACCAACAACAATTGTTGCTTCAAGGAAAGGGTTTACCCTGTTGGGAAACATCTTCTTCTTAATCATTCCTTGGTGGGTTTGTTGCAGC
AGATAAGCAGAGCATTTGATGCTCAAGCTTTTGACAGAGTTCAAAAGTTGAAGAAGCAGTTAGCAAATTTCTATGTTGTTGTTGTCCTTCCAACCAAGGAGCAGAATGAT
TCATTTGTACAATCTTACTTCAGGGAAAAGATAGATATGATGGAAACTGTGTATCAACCTTATTACGTGGATCCCCAGTTGGAATTACTCATTGAAAGAATTTACCCACC
CAGAGTTTGCATAGGCAATGATACCTTTCAGGATTGCACGCTTGTGAAGGTTCGATCCCTATCTTCAAAGTTCTTCAAGATCGATGTACATGAGCAAGATTCTGCCGAAA
AGAATGGATGCTGCATGTACGAGAATATTTGTTTTTCTTAA
Protein sequenceShow/hide protein sequence
MCSLLRLGQFYEFFSFSHLTSPVQCESSVFLLDIDVGGSCLQWKTNNNCCFKERVYPVGKHLLLNHSLVGLLQQISRAFDAQAFDRVQKLKKQLANFYVVVVLPTKEQND
SFVQSYFREKIDMMETVYQPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDVHEQDSAEKNGCCMYENICFS