; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001959 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001959
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBeta-galactosidase
Genome locationchr4:37557839..37563666
RNA-Seq ExpressionLag0001959
SyntenyLag0001959
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type
IPR017853 - Glycoside hydrolase superfamily
IPR031330 - Glycoside hydrolase 35, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144509.1 chromatin remodeling protein EBS isoform X1 [Cucumis sativus]6.4e-1163.93Show/hide
Query:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV
        L++    C +W   FHPSCMGMTIEEAKKLDHFLCSDCSSEN+A RSLN  P+    + KV
Subjt:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV

XP_008455467.1 PREDICTED: chromatin remodeling protein EBS-like isoform X1 [Cucumis melo]6.4e-1163.93Show/hide
Query:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV
        L++    C +W   FHPSCMGMTIEEAKKLDHFLCSDCSSEN+A RSLN  P+    + KV
Subjt:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV

XP_008455469.1 PREDICTED: chromatin remodeling protein EBS-like isoform X2 [Cucumis melo]6.4e-1163.93Show/hide
Query:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV
        L++    C +W   FHPSCMGMTIEEAKKLDHFLCSDCSSEN+A RSLN  P+    + KV
Subjt:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV

XP_011658692.1 chromatin remodeling protein EBS isoform X2 [Cucumis sativus]6.4e-1163.93Show/hide
Query:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV
        L++    C +W   FHPSCMGMTIEEAKKLDHFLCSDCSSEN+A RSLN  P+    + KV
Subjt:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV

XP_022136260.1 chromatin remodeling protein EBS-like [Momordica charantia]2.2e-1165.57Show/hide
Query:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV
        L++    C +W   FHPSCMGMTIEEAKKLDHFLCSDCSSENDA RSLN  P+    + KV
Subjt:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV

TrEMBL top hitse value%identityAlignment
A0A0A0K3H3 Uncharacterized protein3.1e-1163.93Show/hide
Query:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV
        L++    C +W   FHPSCMGMTIEEAKKLDHFLCSDCSSEN+A RSLN  P+    + KV
Subjt:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV

A0A1S3C0J0 chromatin remodeling protein EBS-like isoform X23.1e-1163.93Show/hide
Query:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV
        L++    C +W   FHPSCMGMTIEEAKKLDHFLCSDCSSEN+A RSLN  P+    + KV
Subjt:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV

A0A1S3C280 chromatin remodeling protein EBS-like isoform X13.1e-1163.93Show/hide
Query:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV
        L++    C +W   FHPSCMGMTIEEAKKLDHFLCSDCSSEN+A RSLN  P+    + KV
Subjt:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV

A0A5A7UF44 Protein mlo2-like isoform X24.0e-1166.1Show/hide
Query:  LVGSSGLYLYLLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLN
        L G   ++L+LL       ++ F FHPSCMGMTIEEAKKLDHFLCSDCSS+N+ANRSLN
Subjt:  LVGSSGLYLYLLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLN

A0A6J1C3E6 chromatin remodeling protein EBS-like1.1e-1165.57Show/hide
Query:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV
        L++    C +W   FHPSCMGMTIEEAKKLDHFLCSDCSSENDA RSLN  P+    + KV
Subjt:  LLISPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNP-PIYAFGQRKV

SwissProt top hitse value%identityAlignment
A2X2H7 Beta-galactosidase 41.2e-0960.87Show/hide
Query:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        PV  +Y F  RYDLV+F++LV  +GLY++L I PYVCAEWNFG  P
Subjt:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP

Q6Z6K4 Beta-galactosidase 41.2e-0960.87Show/hide
Query:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        PV  +Y F  RYDLV+F++LV  +GLY++L I PYVCAEWNFG  P
Subjt:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP

Q9SCV3 Beta-galactosidase 95.4e-1371.74Show/hide
Query:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        PV  +YNF+ RYDLVKF++L+GSSGLYL+L I PYVCAEWNFG  P
Subjt:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP

Q9SCV4 Beta-galactosidase 82.5e-1056.86Show/hide
Query:  YPGVLPVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        + G  P   KYNF+ RYDLVKF++L   +GLY++L I PYVCAEWN+G  P
Subjt:  YPGVLPVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP

Q9SCW1 Beta-galactosidase 17.3e-1069.05Show/hide
Query:  KYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        KY F+  YDLVKF++LV  SGLYL+L I PYVCAEWNFG  P
Subjt:  KYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP

Arabidopsis top hitse value%identityAlignment
AT2G28470.1 beta-galactosidase 81.8e-1156.86Show/hide
Query:  YPGVLPVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        + G  P   KYNF+ RYDLVKF++L   +GLY++L I PYVCAEWN+G  P
Subjt:  YPGVLPVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP

AT2G28470.2 beta-galactosidase 81.8e-1156.86Show/hide
Query:  YPGVLPVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        + G  P   KYNF+ RYDLVKF++L   +GLY++L I PYVCAEWN+G  P
Subjt:  YPGVLPVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP

AT2G32810.1 beta galactosidase 93.8e-1471.74Show/hide
Query:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        PV  +YNF+ RYDLVKF++L+GSSGLYL+L I PYVCAEWNFG  P
Subjt:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP

AT2G32810.2 beta galactosidase 93.8e-1471.74Show/hide
Query:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        PV  +YNF+ RYDLVKF++L+GSSGLYL+L I PYVCAEWNFG  P
Subjt:  PVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP

AT3G13750.1 beta galactosidase 15.2e-1169.05Show/hide
Query:  KYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP
        KY F+  YDLVKF++LV  SGLYL+L I PYVCAEWNFG  P
Subjt:  KYNFDRRYDLVKFIRLVGSSGLYLYLLISPYVCAEWNFGFHP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTCTGTCGCCCAATGTTGCTGTTTCTTTCTACTTTCGTTCTTGTCGGTCGGATGAGGAGTGGCGAGGCCGTTTAAGTTCAGTATCTACCATCGATTTTCGGAT
TCGAGTAAGGGGATTCTCGACTCTTGAAGGGGATTCTCGACTCTTGAAGGTTTACCGGAGAAACACAGCCCTGGATATTAGCAAAAAGGAGGTAAGCCTATCTAAAGAAT
ATCCTGGGGTACTTCCTGTTTGGCCTAAGTATAACTTTGATAGGAGATATGACCTTGTCAAATTTATAAGGCTGGTAGGATCCAGTGGCCTCTACCTTTATTTACTCATT
TCACCATATGTATGTGCAGAGTGGAATTTCGGGTTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTCATC
AGAAAATGATGCGAATAGGTCCTTGAATCCTCCAATATATGCTTTTGGCCAACGCAAAGTTGCGTCGGCATATTGTCTGCGCCGACGCAAGATGCGTCGGCGTAGATCAT
TCAAACCAACAATTTCAAAATATCAATGTCGACGCAAAATGCGTCGGCGTAGACATTCTACGTCGACGCACATGTTGTGCGTCGGCGTATACATCTACGCCGACGTGTCT
ACTCCGACGTTCATGCCGACGCAATCTTTGCGTCGGCGAGTTGTCTACGCCGACGCGAGAGGGGTCTACGCCGACGCATCGTTGCGTCGGCGTAGACCGAAAATCTTTGA
ATTTGTAGAAACTGAGGAAGACGTGACCTGCAAAACCAGCAAGGACCGCTGCACACCGGCGTGGTGTAGGCCATACCGCCTCCGATGCTTAAGTCAGAAAACGGGAGGAG
AGCAAGAAAGTAAGAGAAGAGAGTCGATAATTCAGTTCGGGTCCCCTCTTCAGTGGCGAAGAGGGTATAAATACCTGCTCATCCTAGGGTTTTTTAGGAGTTCGGAGGCG
TTTCGGGACAAACCAGGCAGATCCGGGGCAGCTAGAGGCTATAGGGACCAAGCGGGCCCGACAGGCTCGGCCCGCGCGAGTGGGCCGAGCAGGGGGTCAGGCCAAAATCC
CGACCCCTTCGGTCTTGGCCCGTCCCGCTCGCCGGTTTCGCCTCTTGGGTCCATCTTCCGGTCTGATTTCTGCTCGGTTGTCCTCGTTAGCTCCTTGTGCATCGGGGTGG
TCCAAAATTACCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTTCTGTCGCCCAATGTTGCTGTTTCTTTCTACTTTCGTTCTTGTCGGTCGGATGAGGAGTGGCGAGGCCGTTTAAGTTCAGTATCTACCATCGATTTTCGGAT
TCGAGTAAGGGGATTCTCGACTCTTGAAGGGGATTCTCGACTCTTGAAGGTTTACCGGAGAAACACAGCCCTGGATATTAGCAAAAAGGAGGTAAGCCTATCTAAAGAAT
ATCCTGGGGTACTTCCTGTTTGGCCTAAGTATAACTTTGATAGGAGATATGACCTTGTCAAATTTATAAGGCTGGTAGGATCCAGTGGCCTCTACCTTTATTTACTCATT
TCACCATATGTATGTGCAGAGTGGAATTTCGGGTTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTCATC
AGAAAATGATGCGAATAGGTCCTTGAATCCTCCAATATATGCTTTTGGCCAACGCAAAGTTGCGTCGGCATATTGTCTGCGCCGACGCAAGATGCGTCGGCGTAGATCAT
TCAAACCAACAATTTCAAAATATCAATGTCGACGCAAAATGCGTCGGCGTAGACATTCTACGTCGACGCACATGTTGTGCGTCGGCGTATACATCTACGCCGACGTGTCT
ACTCCGACGTTCATGCCGACGCAATCTTTGCGTCGGCGAGTTGTCTACGCCGACGCGAGAGGGGTCTACGCCGACGCATCGTTGCGTCGGCGTAGACCGAAAATCTTTGA
ATTTGTAGAAACTGAGGAAGACGTGACCTGCAAAACCAGCAAGGACCGCTGCACACCGGCGTGGTGTAGGCCATACCGCCTCCGATGCTTAAGTCAGAAAACGGGAGGAG
AGCAAGAAAGTAAGAGAAGAGAGTCGATAATTCAGTTCGGGTCCCCTCTTCAGTGGCGAAGAGGGTATAAATACCTGCTCATCCTAGGGTTTTTTAGGAGTTCGGAGGCG
TTTCGGGACAAACCAGGCAGATCCGGGGCAGCTAGAGGCTATAGGGACCAAGCGGGCCCGACAGGCTCGGCCCGCGCGAGTGGGCCGAGCAGGGGGTCAGGCCAAAATCC
CGACCCCTTCGGTCTTGGCCCGTCCCGCTCGCCGGTTTCGCCTCTTGGGTCCATCTTCCGGTCTGATTTCTGCTCGGTTGTCCTCGTTAGCTCCTTGTGCATCGGGGTGG
TCCAAAATTACCTATAA
Protein sequenceShow/hide protein sequence
MAFLSPNVAVSFYFRSCRSDEEWRGRLSSVSTIDFRIRVRGFSTLEGDSRLLKVYRRNTALDISKKEVSLSKEYPGVLPVWPKYNFDRRYDLVKFIRLVGSSGLYLYLLI
SPYVCAEWNFGFHPSCMGMTIEEAKKLDHFLCSDCSSENDANRSLNPPIYAFGQRKVASAYCLRRRKMRRRRSFKPTISKYQCRRKMRRRRHSTSTHMLCVGVYIYADVS
TPTFMPTQSLRRRVVYADARGVYADASLRRRRPKIFEFVETEEDVTCKTSKDRCTPAWCRPYRLRCLSQKTGGEQESKRRESIIQFGSPLQWRRGYKYLLILGFFRSSEA
FRDKPGRSGAARGYRDQAGPTGSARASGPSRGSGQNPDPFGLGPSRSPVSPLGSIFRSDFCSVVLVSSLCIGVVQNYL