| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7014568.1 DNA-directed RNA polymerases II and IV subunit 5A, partial [Cucurbita argyrosperma subsp. argyrosperma] | 1.5e-101 | 97.01 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFK+KYGE+MKREDIVINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLLTNEEKKTLLERYTVKETQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
Query: V
V
Subjt: V
|
|
| XP_022143609.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Momordica charantia] | 1.5e-101 | 97.09 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFK+KYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022953770.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 1.4e-99 | 94.17 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFK+KYGE+MKRED+VINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLLTNEEKKTLLERYTVKET QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 1.5e-98 | 92.72 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFR+RKTVLQMLKDR YFVGDFE+DMSREQFKNKYGE+MKREDIVINKA+RNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKET QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 1.0e-99 | 94.66 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFK+KYGE+MKREDIVINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLLTNEEKKTLLERYTVKET QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CPU1 DNA-directed RNA polymerases II and IV subunit 5A-like | 7.1e-102 | 97.09 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFK+KYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1GQK9 DNA-directed RNA polymerases II and IV subunit 5A-like | 6.6e-100 | 94.17 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFK+KYGE+MKRED+VINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLLTNEEKKTLLERYTVKET QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 7.3e-99 | 92.72 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFR+RKTVLQMLKDR YFVGDFE+DMSREQFKNKYGE+MKREDIVINKA+RNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKET QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 5.1e-100 | 94.66 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLSEEEITRLFRIRKTVLQMLKDR YFVGDFEIDMSREQFK+KYGE+MKREDIVINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLLTNEEKKTLLERYTVKET QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 7.3e-99 | 92.72 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFR+RKTVLQMLKDR YFVGDFE+DMSREQFKNKYGE+MKREDIVINKA+RNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKET QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.5e-52 | 50.97 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DR Y V E+D + E+FK ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQVT-----DPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH ++T EE LL RY ++E+Q+ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQVT-----DPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 2.1e-87 | 79.02 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L+EEE+ RL+RI+KT++QML+DR YF+ D E+ M+++QF K+G+NMKRED+V KA+RND+SDQ+Y+FFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE+LVNIK+HVLVPEHQ+LT EEKKTLLERYTVKET QVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.5e-51 | 50.49 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DR Y V E+D + E+F+ ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQVT-----DPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH ++T EE LL RY ++E Q+ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQVT-----DPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.5e-52 | 50.97 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DR Y V E+D + E+FK ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGE-----NMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQVT-----DPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH ++T EE LL RY ++E+Q+ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQVT-----DPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.9e-51 | 52.61 | Show/hide |
Query: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMK-----REDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENV
M E E RL+RIRKTVLQM+ DR Y V E+D E FK +YG+ R D+ I A +D +DQ++VFFPE+ K+G+KT+K +M+ +N+
Subjt: MVLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMK-----REDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENV
Query: FRAILVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQV-----TDPVARYYGLKRGQVVKIIRPSET
RAI+VVQ +TP A+ I +++ K+ LE F EAEL+VNI +H LVPEH ++T EEK LL RY +K++Q+ DPVARY+GL+RGQVVKIIRPSET
Subjt: FRAILVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQV-----TDPVARYYGLKRGQVVKIIRPSET
Query: AGRYVTYRYVV
AGRY+TYR VV
Subjt: AGRYVTYRYVV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 6.7e-28 | 36.95 | Show/hide |
Query: SEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVV
S E + + R+T ++ML+DR Y V D +I++S +QF+ YGE+ + + I+ R DSS +I V F V V M+ + + EN+ ILV+
Subjt: SEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVV
Query: QQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQV-----TDPVARYYGLKRGQVVKIIRPSETAGRYVTY
Q ++T A + S F +E+F+ +LLVN+ HVL P+HQ+L ++EK++LL++++++E Q+ DP+ RYYGL+ GQV+K+ E + +VTY
Subjt: QQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQV-----TDPVARYYGLKRGQVVKIIRPSETAGRYVTY
Query: RYV
R V
Subjt: RYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.5e-88 | 79.02 | Show/hide |
Query: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L+EEE+ RL+RI+KT++QML+DR YF+ D E+ M+++QF K+G+NMKRED+V KA+RND+SDQ+Y+FFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE+LVNIK+HVLVPEHQ+LT EEKKTLLERYTVKET QVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKET-----QVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 7.2e-22 | 31.84 | Show/hide |
Query: EITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
E R + R T +ML+DR Y V + E+ ++ +F++ +GE + E + I R+D +I V F + + VK+++ ++ + + ILV+Q
Subjt: EITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
Query: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQV-----TDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+ FA+ ++ + F +E F +LLVNI H+ P+ ++L EEK+ LL ++ +++ Q+ D RYYGLK+ QVVKI E G +VTYR +
Subjt: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQV-----TDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
Query: V
+
Subjt: V
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 7.4e-27 | 36.76 | Show/hide |
Query: LSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
LS EE R + R+ LQML+DR Y V D +I++S F+ YGE + + I+ R+DS+ ++ + F V V +++ + + E + ILV
Subjt: LSEEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENMKREDIVINKARRNDSSDQIYVFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQV-----TDPVARYYGLKRGQVVKIIRPSETAGRYVT
+Q ++T A I S F +E+FQ +LLVNI H L P+HQ+L +EEK TLL++++++E Q+ D + RYYGL++GQVVK+ E +V
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQV-----TDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYV
+R V
Subjt: YRYV
|
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 1.5e-40 | 43.69 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENM---KREDIVINKARRNDSSDQIYVFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
++EITR+F++R+TVLQML+DR Y + + ++++ RE+F ++ + M +E + ++ + + +D+IYVF+PE KVGV + K +M+ + V R I+
Subjt: EEEITRLFRIRKTVLQMLKDRSYFVGDFEIDMSREQFKNKYGENM---KREDIVINKARRNDSSDQIYVFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQ-----VTDPVARYYGLKRGQVVKIIRPSETAGRYV
VV +T AR +SE++ +EVF+EAEL+ NI +H LV ++ +L ++ KK LL YTV++TQ VTDP+ARYYGLKRGQVVKI R T+ Y
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLTNEEKKTLLERYTVKETQ-----VTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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