; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001973 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001973
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionFanconi anemia group D2 protein
Genome locationchr4:37838688..37840376
RNA-Seq ExpressionLag0001973
SyntenyLag0001973
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44712.1 hypothetical protein Csa_016169 [Cucumis sativus]6.3e-2284.06Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAE
        MLRTRLFWFS+GF  TA SIS FVWRDLLAYR ALSSDASFME++FDALEARISNLES RNRNS+ SAE
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAE

XP_022143614.1 uncharacterized protein LOC111013471 isoform X1 [Momordica charantia]1.5e-2082.86Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK
        MLRTRLFWFSVGFG  A SISQFVW+DLLAYR ALSSD   ME+NFDALEARISNLESVRNRNS+ SAE+
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK

XP_022143615.1 uncharacterized protein LOC111013471 isoform X2 [Momordica charantia]1.5e-2080.56Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEKTE
        MLRTRLFWFSVGFG  A SISQFVW+DLLAYR ALSSD   ME+NFDALEARISNLESVRNRNS+ SAE  +
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEKTE

XP_022953273.1 uncharacterized protein LOC111455871 isoform X1 [Cucurbita moschata]7.6e-2081.43Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK
        MLRTRLFWFSVGF  T+ SISQFVWRDLLA+R ALSSD   +E+NFDALEARISNLESVRNR+SIPSAE+
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK

XP_022992002.1 uncharacterized protein LOC111488481 isoform X1 [Cucurbita maxima]7.6e-2081.43Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK
        MLRTRLFWFSVGF  T+ SISQFVWRDLLA+R ALSSD   +E+NFDALEARISNLESVRNR+SIPSAE+
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK

TrEMBL top hitse value%identityAlignment
A0A0A0K8L3 Uncharacterized protein3.0e-2284.06Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAE
        MLRTRLFWFS+GF  TA SIS FVWRDLLAYR ALSSDASFME++FDALEARISNLES RNRNS+ SAE
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAE

A0A6J1CP96 uncharacterized protein LOC111013471 isoform X27.5e-2180.56Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEKTE
        MLRTRLFWFSVGFG  A SISQFVW+DLLAYR ALSSD   ME+NFDALEARISNLESVRNRNS+ SAE  +
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEKTE

A0A6J1CPU7 uncharacterized protein LOC111013471 isoform X17.5e-2182.86Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK
        MLRTRLFWFSVGFG  A SISQFVW+DLLAYR ALSSD   ME+NFDALEARISNLESVRNRNS+ SAE+
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK

A0A6J1GP63 uncharacterized protein LOC111455871 isoform X23.7e-2079.17Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEKTE
        MLRTRLFWFSVGF  T+ SISQFVWRDLLA+R ALSSD   +E+NFDALEARISNLESVRNR+SIPSAE  +
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEKTE

A0A6J1JNH5 uncharacterized protein LOC111488481 isoform X13.7e-2081.43Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK
        MLRTRLFWFSVGF  T+ SISQFVWRDLLA+R ALSSD   +E+NFDALEARISNLESVRNR+SIPSAE+
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07568.1 unknown protein2.8e-1255.22Show/hide
Query:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPS
        MLRTRL WF++GF VT  SI+  VWRDL A R+A+SSD   M++ F ALE R+S LES    N  P+
Subjt:  MLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTTCTCCTTCTTCAAAACCTTGCCAAGACGACGAGTCGGAACTCTTGCGAAGCTTCTGCGGTTCGTTCTCGAAGGAAAAATGTTGAGAACTCGACTGTTTTGGTT
CAGTGTTGGATTTGGGGTCACAGCCACTTCCATTTCTCAATTCGTCTGGAGAGATCTATTGGCCTACCGATATGCTCTTTCCTCCGATGCAAGTTTTATGGAGCAGAATT
TTGACGCCCTGGAAGCTAGAATCTCGAATCTCGAGTCGGTTCGAAACCGGAATTCGATTCCATCTGCTGAGAAAACAGAGAAAACCTTTGTTTGTTTGAAAACAGCCATG
ACCATCCTACCAGTGCTACTGCTAGCTATACCAAGCTTTAACAAGGAGTTTGTTGTTGAAGTTGATGCAATGTGGGATAGTAGTGGTTTTGATGTAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTACTTCTCCTTCTTCAAAACCTTGCCAAGACGACGAGTCGGAACTCTTGCGAAGCTTCTGCGGTTCGTTCTCGAAGGAAAAATGTTGAGAACTCGACTGTTTTGGTT
CAGTGTTGGATTTGGGGTCACAGCCACTTCCATTTCTCAATTCGTCTGGAGAGATCTATTGGCCTACCGATATGCTCTTTCCTCCGATGCAAGTTTTATGGAGCAGAATT
TTGACGCCCTGGAAGCTAGAATCTCGAATCTCGAGTCGGTTCGAAACCGGAATTCGATTCCATCTGCTGAGAAAACAGAGAAAACCTTTGTTTGTTTGAAAACAGCCATG
ACCATCCTACCAGTGCTACTGCTAGCTATACCAAGCTTTAACAAGGAGTTTGTTGTTGAAGTTGATGCAATGTGGGATAGTAGTGGTTTTGATGTAGGATAA
Protein sequenceShow/hide protein sequence
MYFSFFKTLPRRRVGTLAKLLRFVLEGKMLRTRLFWFSVGFGVTATSISQFVWRDLLAYRYALSSDASFMEQNFDALEARISNLESVRNRNSIPSAEKTEKTFVCLKTAM
TILPVLLLAIPSFNKEFVVEVDAMWDSSGFDVG