; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0001989 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0001989
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr4:37949175..37949794
RNA-Seq ExpressionLag0001989
SyntenyLag0001989
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW31723.1 putative ribonuclease H protein [Vitis vinifera]4.4e-1140.2Show/hide
Query:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLS----KQETIRRFEIKAQLILSSANEEILWRQKCKLKWLS
        WW+    +GW  H F++KLK +KS LK+WN  VFG  +E +  + T L  +DR E+ G L+     + T+RR E++  L+     EE+ WRQK ++KW+ 
Subjt:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLS----KQETIRRFEIKAQLILSSANEEILWRQKCKLKWLS

Query:  EG
        EG
Subjt:  EG

RVW35045.1 hypothetical protein CK203_079833 [Vitis vinifera]2.6e-1138.33Show/hide
Query:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLS----KQETIRRFEIKAQLILSSANEEILWRQKCKLKWLS
        WW+    +GW  H F++KLK +KS LK+WN  VFG  +E +  + T L  +DR E+ G L+     + T+RR E++  L+     EE+ WRQK ++KW+ 
Subjt:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLS----KQETIRRFEIKAQLILSSANEEILWRQKCKLKWLS

Query:  EGMLIQHLSIESWQPIDEKA
        EG        E W P++E+A
Subjt:  EGMLIQHLSIESWQPIDEKA

RVW63564.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.6e-1134.17Show/hide
Query:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEGML
        WW+     GW  H F++KL+ +K+ LK WN++ FG  KE +  +  ++ ++D  E+ G LS     +R   K +L      EEI W+QK K+KW+ EG++
Subjt:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEGML

Query:  IQHLSIESWQPIDEKALSWK
         Q   + S    +E  L +K
Subjt:  IQHLSIESWQPIDEKALSWK

RVX19336.1 putative mitochondrial protein [Vitis vinifera]2.0e-1138.38Show/hide
Query:  SWWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEG
        SWW+     GW  H F++KL+ +K+ LK WN++ FG  KE +  +  ++ ++D  E+ G+LS   + +R E K +L      EEI WRQK K+KW+ +G
Subjt:  SWWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEG

RVX19478.1 hypothetical protein CK203_005375 [Vitis vinifera]3.3e-1137.37Show/hide
Query:  SWWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEG
        SWW+     GW  H F++KL+ +K+ LK WN++ FG  KE +  +  ++ ++D  E+ G LS    ++R   K +L      EEI WRQK K+KW+ +G
Subjt:  SWWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEG

TrEMBL top hitse value%identityAlignment
A0A438DHT7 Uncharacterized protein1.2e-1138.33Show/hide
Query:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLS----KQETIRRFEIKAQLILSSANEEILWRQKCKLKWLS
        WW+    +GW  H F++KLK +KS LK+WN  VFG  +E +  + T L  +DR E+ G L+     + T+RR E++  L+     EE+ WRQK ++KW+ 
Subjt:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLS----KQETIRRFEIKAQLILSSANEEILWRQKCKLKWLS

Query:  EGMLIQHLSIESWQPIDEKA
        EG        E W P++E+A
Subjt:  EGMLIQHLSIESWQPIDEKA

A0A438FUE8 Transposon TX1 uncharacterized 149 kDa protein1.2e-1134.17Show/hide
Query:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEGML
        WW+     GW  H F++KL+ +K+ LK WN++ FG  KE +  +  ++ ++D  E+ G LS     +R   K +L      EEI W+QK K+KW+ EG++
Subjt:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEGML

Query:  IQHLSIESWQPIDEKALSWK
         Q   + S    +E  L +K
Subjt:  IQHLSIESWQPIDEKALSWK

A0A438G6A4 Transposon TX1 uncharacterized 149 kDa protein2.1e-1140.2Show/hide
Query:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLS----KQETIRRFEIKAQLILSSANEEILWRQKCKLKWLS
        WW+    +GW  H F++KLK +KS LK+WN  VFG  +E +  + T L  +DR E+ G L+     + T+RR E++  L+     EE+ WRQK ++KW+ 
Subjt:  WWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLS----KQETIRRFEIKAQLILSSANEEILWRQKCKLKWLS

Query:  EG
        EG
Subjt:  EG

A0A438KDP4 Putative mitochondrial protein9.5e-1238.38Show/hide
Query:  SWWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEG
        SWW+     GW  H F++KL+ +K+ LK WN++ FG  KE +  +  ++ ++D  E+ G+LS   + +R E K +L      EEI WRQK K+KW+ +G
Subjt:  SWWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEG

A0A438KE51 Uncharacterized protein1.6e-1137.37Show/hide
Query:  SWWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEG
        SWW+     GW  H F++KL+ +K+ LK WN++ FG  KE +  +  ++ ++D  E+ G LS    ++R   K +L      EEI WRQK K+KW+ +G
Subjt:  SWWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEILWRQKCKLKWLSEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCTTATCGATAGGTTCCTCATAACTGATGGCATAATCTCCAAATTTTCCGCTGCATCAACCCTTGAATCATGGTGGAAGAACACACCCTCCCAAGGATGGCCAAG
CCATGGATTCATTCAGAAACTAAAAGGCCTCAAATCGGTGCTCAAACAATGGAATCAGTCAGTCTTTGGTCAACAAAAGGAGGTTAGGTCAGGCCTTAAAACAAAGCTTA
CTGATCTGGACAGAAGGGAGAAACTGGGTTTATTATCTAAACAAGAAACTATTCGCAGATTTGAAATTAAAGCCCAACTTATTCTGTCTTCAGCCAATGAGGAGATTCTG
TGGAGACAAAAATGCAAATTGAAATGGCTTAGTGAAGGGATGTTAATACAACATCTTTCCATAGAATCATGGCAGCCCATAGACGAAAAAGCTCTATCATGGAAGTCGTA
TCTGAACCAGGAATTAGCATCACATGTGATGAAGACATCGAAAAGGAGTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGACCCTTATCGATAGGTTCCTCATAACTGATGGCATAATCTCCAAATTTTCCGCTGCATCAACCCTTGAATCATGGTGGAAGAACACACCCTCCCAAGGATGGCCAAG
CCATGGATTCATTCAGAAACTAAAAGGCCTCAAATCGGTGCTCAAACAATGGAATCAGTCAGTCTTTGGTCAACAAAAGGAGGTTAGGTCAGGCCTTAAAACAAAGCTTA
CTGATCTGGACAGAAGGGAGAAACTGGGTTTATTATCTAAACAAGAAACTATTCGCAGATTTGAAATTAAAGCCCAACTTATTCTGTCTTCAGCCAATGAGGAGATTCTG
TGGAGACAAAAATGCAAATTGAAATGGCTTAGTGAAGGGATGTTAATACAACATCTTTCCATAGAATCATGGCAGCCCATAGACGAAAAAGCTCTATCATGGAAGTCGTA
TCTGAACCAGGAATTAGCATCACATGTGATGAAGACATCGAAAAGGAGTTCATAG
Protein sequenceShow/hide protein sequence
MTLIDRFLITDGIISKFSAASTLESWWKNTPSQGWPSHGFIQKLKGLKSVLKQWNQSVFGQQKEVRSGLKTKLTDLDRREKLGLLSKQETIRRFEIKAQLILSSANEEIL
WRQKCKLKWLSEGMLIQHLSIESWQPIDEKALSWKSYLNQELASHVMKTSKRSS