CuGenDBv2

Gene ID	Lag0001993
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	chr4:37999535..38000252
RNA-Seq Expression	Lag0001993
Synteny	Lag0001993
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009507 - chloroplast (cellular component) GO:0009522 - photosystem I (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AFU95099.1 PsaB, partial [Rhizophora mangle]

9.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

QJC59147.1 photosystem I P700 apoprotein A2 [Kandelia obovata]

9.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

QKV48331.1 photosystem I P700 apoprotein A2 [Tipularia szechuanica]

9.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

YP_009654946.1 PsaB [Rhizophora stylosa]

9.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

YP_009669069.1 photosystem I P700 apoprotein A2 [Guaiacum angustifolium]

9.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

TrEMBL top hits

e value

%identity

Alignment

A0A2P2JY84 Photosystem I P700 chlorophyll a apoprotein A1

4.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

A0A2P2JY91 Photosystem I P700 chlorophyll a apoprotein A2

4.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

A0A4D6Q0Z4 Photosystem I P700 chlorophyll a apoprotein A2

4.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

A0A6C0X6J9 Photosystem I P700 chlorophyll a apoprotein A2

4.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

A0A7D4WVX5 Photosystem I P700 chlorophyll a apoprotein A2

4.6e-43

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

SwissProt top hits

e value

%identity

Alignment

A1EA07 Photosystem I P700 chlorophyll a apoprotein A2

3.7e-45

96.2

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHI LWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

A4GG98 Photosystem I P700 chlorophyll a apoprotein A2

2.8e-45

97.47

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHI LWQGNISQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

A4QJB4 Photosystem I P700 chlorophyll a apoprotein A2

3.7e-45

96.2

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHI LWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

A4QJJ8 Photosystem I P700 chlorophyll a apoprotein A2

3.7e-45

96.2

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHI LWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

Q3V535 Photosystem I P700 chlorophyll a apoprotein A2

3.7e-45

96.2

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHI LWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

2.6e-46

96.2

Show/hide

Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW
        MPDKKDFGYSFPCD PGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHI LWQGN+SQFNESSTYLMGWLRDYLW
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLW

ATCG00350.1 Photosystem I, PsaA/PsaB protein

2.1e-19

47.25

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Query:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNIS-----------QFNESSTYLMGWLRDYLWA
        +PDK + G+ FPCD PGRGGTC +SAWD  +L +FWM N I  V F++ WK  +   G+IS            F +SS  + GWLRD+LWA
Subjt:  MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNIS-----------QFNESSTYLMGWLRDYLWA

Sequences

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CDS sequence

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ATGCCGGATAAAAAGGATTTTGGTTATAGTTTTCCTTGCGACAGTCCGGGACGAGGTGGTACTTGTGATATTTCGGCTTGGGACGCCTTTTATTTGGCAGTTTTCTGGAT
GTTAAATACCATTGGATGGGTTACTTTTTATTGGCACTGGAAGCACATCGCATTATGGCAGGGTAACATTTCACAGTTTAATGAATCTTCCACTTATTTGATGGGATGGT
TAAGAGATTATCTATGGGCTGCATTGGGAGTGGGAAATGGCTCATCAAGCCTCATTATTCCCCGATTGAGTAATCTCGTCACCCTAGGGTTCGGTATCCGAGTTAAATCA
CCCTCCAACTACTCGAAGGAGGAAGGCCTCTCGATTCCTCCTGACACCCTTGTCAAGGAGTCAACCACTATAAAATGGGGAATCATTCCCATCAAAAGAGCTCAGCACCA
CACCGATGCGAGGAACAAACTCGAACTTGACCTCGTAGTCGAGGACCTGTGA

mRNA sequence

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Protein sequence

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MPDKKDFGYSFPCDSPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHIALWQGNISQFNESSTYLMGWLRDYLWAALGVGNGSSSLIIPRLSNLVTLGFGIRVKS
PSNYSKEEGLSIPPDTLVKESTTIKWGIIPIKRAQHHTDARNKLELDLVVEDL

Lag0001993 (gene) of Sponge gourd (AG-4) v1 genome