CuGenDBv2

Gene ID	Lag0002007
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	AUGMIN subunit 3 isoform X2
Genome location	chr4:38164497..38165847
RNA-Seq Expression	Lag0002007
Synteny	Lag0002007
Gene Ontology terms	GO:0051225 - spindle assembly (biological process) GO:0051301 - cell division (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005874 - microtubule (cellular component) GO:0070652 - HAUS complex (cellular component) GO:0072686 - mitotic spindle (cellular component)
InterPro domains	IPR026206 - HAUS augmin-like complex subunit 3

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6576034.1 AUGMIN subunit 3, partial [Cucurbita argyrosperma subsp. sororia]

6.8e-45

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

KAG7014555.1 AUGMIN subunit 3 [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-45

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

XP_022953418.1 AUGMIN subunit 3 [Cucurbita moschata]

6.8e-45

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

XP_022991202.1 AUGMIN subunit 3 [Cucurbita maxima]

6.8e-45

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

XP_023548224.1 AUGMIN subunit 3 [Cucurbita pepo subsp. pepo]

6.8e-45

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BGX4 AUGMIN subunit 3 isoform X1

6.2e-44

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPR LMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLR+QVRELTARVRA+QAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

A0A1S3BHJ3 AUGMIN subunit 3 isoform X2

6.2e-44

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPR LMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLR+QVRELTARVRA+QAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

A0A5D3D231 AUGMIN subunit 3 isoform X2

6.2e-44

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPR LMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLR+QVRELTARVRA+QAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

A0A6J1GNA3 AUGMIN subunit 3

3.3e-45

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

A0A6J1JL46 AUGMIN subunit 3

3.3e-45

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINA+LSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

SwissProt top hits

e value

%identity

Alignment

Q0WQE7 AUGMIN subunit 3

2.1e-36

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        C+ IQ+LQQLLFASSTTAQPILTP  LMKELDEM KIN++LS+AVEEVTLEH  K EIVKHH+++V LQRRVFVDFFCNPERLRNQVREL A VRA QAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

Arabidopsis top hits

e value

%identity

Alignment

AT5G48520.1 unknown protein

1.5e-37

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Query:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS
        C+ IQ+LQQLLFASSTTAQPILTP  LMKELDEM KIN++LS+AVEEVTLEH  K EIVKHH+++V LQRRVFVDFFCNPERLRNQVREL A VRA QAS
Subjt:  CSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

Sequences

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CDS sequence

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ATGGACTTATCAGTTGTATGTTGGTGCTCTCTTATTCAAAGTTTGCAGCAATTACTCTTTGCCTCTTCTACAACTGCACAACCGATACTGACACCACGGGCCTTAATGAA
AGAGCTGGATGAGATGGAAAAGATAAATGCCAGACTATCTTCTGCAGTTGAAGAGGTTACCTTGGAGCACTGCAAAAAGAATGAGATTGTAAAACATCACTCTCAGGAGG
TTGGGCTACAACGTCGAGTTTTTGTTGATTTCTTTTGCAATCCTGAGCGTCTGAGGAATCAGGTTCGGGAACTGACTGCTCGAGTTAGAGCCTTGCAAGCTTCATAG

mRNA sequence

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Protein sequence

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MDLSVVCWCSLIQSLQQLLFASSTTAQPILTPRALMKELDEMEKINARLSSAVEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRNQVRELTARVRALQAS

Lag0002007 (gene) of Sponge gourd (AG-4) v1 genome