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Lag0002008 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002008
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAtp-dependent rna helicase dbp7
Genome locationchr4:38177815..38178591
RNA-Seq ExpressionLag0002008
SyntenyLag0002008
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150335.2 uncharacterized protein LOC101219200 [Cucumis sativus]1.4e-4972.79Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKE---EKWNMKEE--TERQHPRQMPKP
        MED+YY R YIP+FGNWEWNDHLPF+ CF+SSRIA F H  DLYVAGDLY+NDVVTPAMIVVPRPRRKR+R GK+   EKW       +     + MPKP
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKE---EKWNMKEE--TERQHPRQMPKP

Query:  VDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
        VDEDLYKISPDLL AK KKKRGLSYIT+CFVPTCL+
Subjt:  VDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

XP_022156085.1 uncharacterized protein LOC111023056 [Momordica charantia]2.0e-4367.36Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAA-------FSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQHPRQ--
        MED+YY R YIP+FGNW+WNDHLPFTQCFDSS  AA       +S  +DLYVAGDLY NDVVTPAMIVVPR   KR R  +E K     ETE    +Q  
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAA-------FSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQHPRQ--

Query:  ----MPKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
             PKPVDEDLYKISP LL AKPKKKRGLSYI SCFVPTCLV
Subjt:  ----MPKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

XP_022960043.1 uncharacterized protein LOC111460910 [Cucurbita moschata]2.5e-4974.07Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQ----HPRQMPKPV
        MED+ Y R +IP FGNWEWNDHLPFTQCF++SRIA +   +DLYVAGDLYQNDVVTPAMIVVPRPRRKR+RHGK+EK     E+  Q     P+ MPKPV
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQ----HPRQMPKPV

Query:  DEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
        DEDLYKISP+  CAKPKKKRGLSYITSCFVPTCL+
Subjt:  DEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

XP_023550147.1 uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo]5.0e-5074.81Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEE---KWNMKEETERQH-PRQMPKPV
        MED+ Y R +IP FGNWEWNDHLPFTQCF++SRIA +   +DLYVAGDLYQNDVVTPAMIVVPRPRRKR+RHGK+E   KW         H P+ MPKPV
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEE---KWNMKEETERQH-PRQMPKPV

Query:  DEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
        DEDLYKISP+ LCAKPKKKRGLSYITSCFVPTCL+
Subjt:  DEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

XP_038899118.1 uncharacterized protein LOC120086508 [Benincasa hispida]5.0e-5072.86Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKE-EKWNMKEETE--------RQHPRQ
        MED+YY R YIP+FGNWEWNDHLPF+ CFDSSRIA + H  DLYVAGDLYQNDVVTPAMIVVPRPRRKR+R GK+  K N  +ETE          + + 
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKE-EKWNMKEETE--------RQHPRQ

Query:  MPKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
        MPKPVDEDLYKISPDLL AK KKKRGLSYIT+CFVPTCL+
Subjt:  MPKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

TrEMBL top hitse value%identityAlignment
A0A0A0KA54 Uncharacterized protein7.0e-5072.79Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKE---EKWNMKEE--TERQHPRQMPKP
        MED+YY R YIP+FGNWEWNDHLPF+ CF+SSRIA F H  DLYVAGDLY+NDVVTPAMIVVPRPRRKR+R GK+   EKW       +     + MPKP
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKE---EKWNMKEE--TERQHPRQMPKP

Query:  VDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
        VDEDLYKISPDLL AK KKKRGLSYIT+CFVPTCL+
Subjt:  VDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

A0A6J1DPB1 uncharacterized protein LOC1110230569.8e-4467.36Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAA-------FSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQHPRQ--
        MED+YY R YIP+FGNW+WNDHLPFTQCFDSS  AA       +S  +DLYVAGDLY NDVVTPAMIVVPR   KR R  +E K     ETE    +Q  
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAA-------FSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQHPRQ--

Query:  ----MPKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
             PKPVDEDLYKISP LL AKPKKKRGLSYI SCFVPTCLV
Subjt:  ----MPKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

A0A6J1GPL2 uncharacterized protein LOC1114559797.8e-4164.29Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEK----WNMKEETERQH-----PRQ
        MED+Y  R YIP+FGNWEWNDHL F+ CF+SSRIA + H  DLYV GDLY+NDVVTPAMIVVPR RRKRE+ GK+ K     NMKE     H     PR 
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEK----WNMKEETERQH-----PRQ

Query:  MPKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
         PKPVDEDLYKI P+LL AK +KKRGLS+  + FVP CL+
Subjt:  MPKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

A0A6J1H7P4 uncharacterized protein LOC1114609101.2e-4974.07Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQ----HPRQMPKPV
        MED+ Y R +IP FGNWEWNDHLPFTQCF++SRIA +   +DLYVAGDLYQNDVVTPAMIVVPRPRRKR+RHGK+EK     E+  Q     P+ MPKPV
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQ----HPRQMPKPV

Query:  DEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
        DEDLYKISP+  CAKPKKKRGLSYITSCFVPTCL+
Subjt:  DEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

A0A6J1KPV8 uncharacterized protein LOC1114976311.2e-4974.07Show/hide
Query:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQ----HPRQMPKPV
        MED+ Y R +IP FGNWEWNDHLPFTQCF++SRIA +   +DLYVAGDLYQNDVVTPAMIVVPRPRRKR+RHGK+EK     E+  Q     P+ MPKPV
Subjt:  MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQ----HPRQMPKPV

Query:  DEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV
        DEDLYKISP+  CAKPKKKRGLSYITSCFVPTCL+
Subjt:  DEDLYKISPDLLCAKPKKKRGLSYITSCFVPTCLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18310.1 unknown protein4.0e-0529.84Show/hide
Query:  IPAFGNWEWNDHLPFTQCFDSSRIA-AFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQHPRQM------PKPVDEDLYKI
        IP FG WE  + +P TQ F++ R A A   A        L+               RR R+   + +K+ +     +Q    +      PKPVDEDLYKI
Subjt:  IPAFGNWEWNDHLPFTQCFDSSRIA-AFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQHPRQM------PKPVDEDLYKI

Query:  SPDLLCAKPKKKRGLSYITSCFVP
         P+ + +  +K+R      +C VP
Subjt:  SPDLLCAKPKKKRGLSYITSCFVP

AT5G18310.2 unknown protein7.5e-0425.66Show/hide
Query:  IPAFGNWEWNDHLPFTQCFDSSRIAAF--------SHAQDLYVAGDLYQNDVVTPAMIVV--PRP-------------------RRKRERHGKEEKWNMK
        IP FG WE  + +P TQ F++ R A          S A     +     +       +    PRP                   RR R+   + +K+ + 
Subjt:  IPAFGNWEWNDHLPFTQCFDSSRIAAF--------SHAQDLYVAGDLYQNDVVTPAMIVV--PRP-------------------RRKRERHGKEEKWNMK

Query:  EETERQHPRQM------PKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVP
            +Q    +      PKPVDEDLYKI P+ + +  +K+R      +C VP
Subjt:  EETERQHPRQM------PKPVDEDLYKISPDLLCAKPKKKRGLSYITSCFVP

AT5G48500.1 unknown protein2.9e-2440.65Show/hide
Query:  YYPRTYIPAFGNWEWNDHLPFTQCFDSS--------RIAAFSHAQDLYVAGDLYQN-DVVTPAMIVVPRPRRK-------RERHGKEEKWNMKEETER--
        Y  R ++PAFG+W+WND +PFTQCF+++          A++   +DLY+AGDLY N  +V PA+I+VPR R K       ++R+  +++ N K E     
Subjt:  YYPRTYIPAFGNWEWNDHLPFTQCFDSS--------RIAAFSHAQDLYVAGDLYQN-DVVTPAMIVVPRPRRK-------RERHGKEEKWNMKEETER--

Query:  ----------QHPRQMPKPVDEDLYKISPDLLCAKPKKKR---GLSYITSCFVPT
                  +   + PKPVDEDLYK+SP LL  K K+KR   G   I+ CF+PT
Subjt:  ----------QHPRQMPKPVDEDLYKISPDLLCAKPKKKR---GLSYITSCFVPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTTCTACTACCCAAGAACCTACATCCCGGCCTTCGGCAACTGGGAATGGAACGACCATCTTCCTTTCACACAGTGCTTCGACTCCTCCCGCATCGCCGCCTT
CTCCCACGCCCAAGACCTCTACGTCGCCGGCGACCTCTACCAGAACGACGTCGTCACCCCCGCCATGATCGTCGTTCCTCGCCCCAGGAGGAAGCGTGAGAGACATGGGA
AGGAAGAAAAGTGGAATATGAAGGAGGAAACAGAAAGGCAGCATCCAAGGCAAATGCCCAAACCAGTTGACGAAGACTTGTACAAAATTTCTCCAGACCTCCTCTGCGCC
AAGCCCAAAAAGAAGAGAGGGCTGAGTTACATTACAAGCTGCTTTGTGCCAACTTGTTTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTTCTACTACCCAAGAACCTACATCCCGGCCTTCGGCAACTGGGAATGGAACGACCATCTTCCTTTCACACAGTGCTTCGACTCCTCCCGCATCGCCGCCTT
CTCCCACGCCCAAGACCTCTACGTCGCCGGCGACCTCTACCAGAACGACGTCGTCACCCCCGCCATGATCGTCGTTCCTCGCCCCAGGAGGAAGCGTGAGAGACATGGGA
AGGAAGAAAAGTGGAATATGAAGGAGGAAACAGAAAGGCAGCATCCAAGGCAAATGCCCAAACCAGTTGACGAAGACTTGTACAAAATTTCTCCAGACCTCCTCTGCGCC
AAGCCCAAAAAGAAGAGAGGGCTGAGTTACATTACAAGCTGCTTTGTGCCAACTTGTTTGGTTTGA
Protein sequenceShow/hide protein sequence
MEDFYYPRTYIPAFGNWEWNDHLPFTQCFDSSRIAAFSHAQDLYVAGDLYQNDVVTPAMIVVPRPRRKRERHGKEEKWNMKEETERQHPRQMPKPVDEDLYKISPDLLCA
KPKKKRGLSYITSCFVPTCLV