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Lag0002047 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002047
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:38701650..38706185
RNA-Seq ExpressionLag0002047
SyntenyLag0002047
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP33882.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus cajan]7.3e-0425.42Show/hide
Query:  LMPNGICVGYVWDTLDHFAWLKDHGVEEDGAYFVLLLWHIWELRNRRIFRKGEISIGMVKKAIQASLWELFPSTTRGTCGPDYL----DSHGIVELHAMA
        L+  GI VG+ +  +D F WLK   + +D     + LW +W LRN  +F     +I  V++ +  SL E          G +        H  V+L+   
Subjt:  LMPNGICVGYVWDTLDHFAWLKDHGVEEDGAYFVLLLWHIWELRNRRIFRKGEISIGMVKKAIQASLWELFPSTTRGTCGPDYL----DSHGIVELHAMA

Query:  AWTPPPPRRICGLFTVMQLGC----------ESVTGILGVDTL--EMQVIRTGLLAVGEMGPPRLMVESDCLTPVYL
        +W       + G + +   G               G L  D L  E+  +  GL    E G  ++  E DCL  V L
Subjt:  AWTPPPPRRICGLFTVMQLGC----------ESVTGILGVDTL--EMQVIRTGLLAVGEMGPPRLMVESDCLTPVYL
TrEMBL top hitse value%identityAlignment
A0A151QUD3 Putative ribonuclease H protein At1g65750 family (Fragment)3.5e-0425.42Show/hide
Query:  LMPNGICVGYVWDTLDHFAWLKDHGVEEDGAYFVLLLWHIWELRNRRIFRKGEISIGMVKKAIQASLWELFPSTTRGTCGPDYL----DSHGIVELHAMA
        L+  GI VG+ +  +D F WLK   + +D     + LW +W LRN  +F     +I  V++ +  SL E          G +        H  V+L+   
Subjt:  LMPNGICVGYVWDTLDHFAWLKDHGVEEDGAYFVLLLWHIWELRNRRIFRKGEISIGMVKKAIQASLWELFPSTTRGTCGPDYL----DSHGIVELHAMA

Query:  AWTPPPPRRICGLFTVMQLGC----------ESVTGILGVDTL--EMQVIRTGLLAVGEMGPPRLMVESDCLTPVYL
        +W       + G + +   G               G L  D L  E+  +  GL    E G  ++  E DCL  V L
Subjt:  AWTPPPPRRICGLFTVMQLGC----------ESVTGILGVDTL--EMQVIRTGLLAVGEMGPPRLMVESDCLTPVYL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGCCTGCAAGGAAGCTAATGCCTAACGGAATCTGCGTAGGGTATGTTTGGGATACTCTGGATCACTTCGCATGGCTTAAAGACCATGGCGTGGAAGAAGATGG
GGCATACTTCGTCCTACTTCTATGGCATATTTGGGAGTTGAGAAATCGCAGGATCTTTCGCAAGGGAGAGATCTCCATTGGAATGGTGAAGAAGGCTATTCAGGCATCTC
TTTGGGAGCTTTTCCCCTCGACTACTCGTGGGACTTGTGGGCCTGACTATCTTGACTCGCATGGGATAGTGGAATTGCATGCGATGGCTGCTTGGACCCCTCCCCCCCCT
CGGCGAATATGTGGTCTCTTTACTGTGATGCAGCTTGGGTGTGAGTCAGTTACAGGGATCCTCGGGGTGGACACATTGGAAATGCAGGTAATTCGGACTGGATTATTGGC
TGTTGGTGAGATGGGGCCTCCTCGATTGATGGTGGAGTCAGACTGTCTGACTCCTGTATATCTCTTGAATGGTGGGATGAGAACCTCACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGCCTGCAAGGAAGCTAATGCCTAACGGAATCTGCGTAGGGTATGTTTGGGATACTCTGGATCACTTCGCATGGCTTAAAGACCATGGCGTGGAAGAAGATGG
GGCATACTTCGTCCTACTTCTATGGCATATTTGGGAGTTGAGAAATCGCAGGATCTTTCGCAAGGGAGAGATCTCCATTGGAATGGTGAAGAAGGCTATTCAGGCATCTC
TTTGGGAGCTTTTCCCCTCGACTACTCGTGGGACTTGTGGGCCTGACTATCTTGACTCGCATGGGATAGTGGAATTGCATGCGATGGCTGCTTGGACCCCTCCCCCCCCT
CGGCGAATATGTGGTCTCTTTACTGTGATGCAGCTTGGGTGTGAGTCAGTTACAGGGATCCTCGGGGTGGACACATTGGAAATGCAGGTAATTCGGACTGGATTATTGGC
TGTTGGTGAGATGGGGCCTCCTCGATTGATGGTGGAGTCAGACTGTCTGACTCCTGTATATCTCTTGAATGGTGGGATGAGAACCTCACCTTAG
Protein sequenceShow/hide protein sequence
MEEPARKLMPNGICVGYVWDTLDHFAWLKDHGVEEDGAYFVLLLWHIWELRNRRIFRKGEISIGMVKKAIQASLWELFPSTTRGTCGPDYLDSHGIVELHAMAAWTPPPP
RRICGLFTVMQLGCESVTGILGVDTLEMQVIRTGLLAVGEMGPPRLMVESDCLTPVYLLNGGMRTSP