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Lag0002049 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002049
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionExtracellular ligand-binding receptor
Genome locationchr4:38748869..38749423
RNA-Seq ExpressionLag0002049
SyntenyLag0002049
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576012.1 hypothetical protein SDJN03_26651, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4673.75Show/hide
Query:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV
        SSSC  IP LASTLLLLLLLIPSLKLLINGLNSL TL  CLFFKAP CVL+SLL  L+ PAEA L A QSLA+AL+W  VS +EMGLGI+ SF MAVLG 
Subjt:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV

Query:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG
        +KNVVFGSF E GSAFG LLDK KAS EG SL EQ+REI+G V  K+LD VL+TA+SSAG
Subjt:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG

KAG7014533.1 hypothetical protein SDJN02_24711, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-3962.71Show/hide
Query:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV
        SSSC  IP LASTLLLLLLLIPSLKLLINGLNSL TL  CLFFKAPPCVL+SLL  L+ PAEA L A QSLA+AL+W  VS +EMGLGI+ SF MAVLG 
Subjt:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV

Query:  VKNVVFGSFAESGSAFGGLLDKTKASWEG-SSLFEQLREIVGSVCEKLLDQVLDTAASSAGRDRDIENNVHEKFFSL
        +KNVVFGSF E GS FGGLLDK +AS EG S+L       +G +   +L  +L+   SS G  R I  ++ EK   L
Subjt:  VKNVVFGSFAESGSAFGGLLDKTKASWEG-SSLFEQLREIVGSVCEKLLDQVLDTAASSAGRDRDIENNVHEKFFSL

XP_011659765.2 uncharacterized protein LOC105436268 [Cucumis sativus]3.1e-4266.07Show/hide
Query:  MSCSSSSSSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSF
        M CSSSSS+    I  + ST LLLLLLIPSLK++ING NSLSTLA+CLF KAPPC++LS LK +KLPAEA LSA QSL EAL+   VS IEMG GI+SSF
Subjt:  MSCSSSSSSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSF

Query:  AMAVLGVVKNVVFGSFAE-SGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG
         M VL  V NVVFGSF E S SAFGGLL+ TK SWEG +LFEQ+R I+ S CE +L QV + A S AG
Subjt:  AMAVLGVVKNVVFGSFAE-SGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG

XP_022954027.1 uncharacterized protein LOC111456411 [Cucurbita moschata]1.6e-4673.12Show/hide
Query:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV
        SSSC  IP LASTLLLLLLLIPSLKLLINGLNSL TL  CLFFKAPPCVL+SLL  L+ PAEA L A QSLA+AL+W  VS++EMGLGI+ SF MAVLG 
Subjt:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV

Query:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG
        +KNVVFGSF E GS FGGLLDK +AS EG SL E +REI+G V  K+LD+VL+TA SSAG
Subjt:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG

XP_022991981.1 uncharacterized protein LOC111488468 [Cucurbita maxima]8.5e-4875Show/hide
Query:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV
        SSSC  IP LASTLLLLLLLIPSLKLLINGLNSL TL  CLFFKAPPCVL+SLL  L+ PAEA L A QSLA+AL+W  VS +EMGLGI+ SF MAVLG 
Subjt:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV

Query:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG
        +KNVVFGSF E GSAFGGLLDK KAS EG SL EQ+REI+G V  K+LD VL+TA SSAG
Subjt:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG

TrEMBL top hitse value%identityAlignment
A0A0A0K6V2 Uncharacterized protein2.9e-4167.76Show/hide
Query:  LASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGVVKNVVFGSF
        + ST LLLLLLIPSLK++ING NSLSTLA+CLF KAPPC++LS LK +KLPAEA LSA QSL EAL+   VS IEMG GI+SSF M VL  V NVVFGSF
Subjt:  LASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGVVKNVVFGSF

Query:  AE-SGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG
         E S SAFGGLL+ TK SWEG +LFEQ+R I+ S CE +L QV + A S AG
Subjt:  AE-SGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG

A0A5D3BCI5 Uncharacterized protein1.6e-0758.21Show/hide
Query:  MAVLGVVKNVVFGSFAESG-SAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG
        M VL VV N+VFGSF ES  SAFGGLL+ T   WEG +LFEQ+R I+ S C+ +L QV + A S AG
Subjt:  MAVLGVVKNVVFGSFAESG-SAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG

A0A6J1DST0 uncharacterized protein LOC1110235983.3e-2954.29Show/hide
Query:  MSCSSSSSSSCSIIPPLASTLLL-LLLLIPSLK-------LLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEM
        MSC SSS  S       AST LL LLL+I SLK       LL NG NSL T    LFFK+ PCVL+S    +KLPA+ALLSA Q LA+A+R  L+  IEM
Subjt:  MSCSSSSSSSCSIIPPLASTLLL-LLLLIPSLK-------LLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEM

Query:  GLGILSSFAMAVLGVVKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG
        GLGI++SF + VL  +KN VFGS  ESGS FGGL++KTK+S+  SS+ +Q+REI+ S+ +K++D  L+TA+S AG
Subjt:  GLGILSSFAMAVLGVVKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG

A0A6J1GPW1 uncharacterized protein LOC1114564117.8e-4773.12Show/hide
Query:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV
        SSSC  IP LASTLLLLLLLIPSLKLLINGLNSL TL  CLFFKAPPCVL+SLL  L+ PAEA L A QSLA+AL+W  VS++EMGLGI+ SF MAVLG 
Subjt:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV

Query:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG
        +KNVVFGSF E GS FGGLLDK +AS EG SL E +REI+G V  K+LD+VL+TA SSAG
Subjt:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG

A0A6J1JSB1 uncharacterized protein LOC1114884684.1e-4875Show/hide
Query:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV
        SSSC  IP LASTLLLLLLLIPSLKLLINGLNSL TL  CLFFKAPPCVL+SLL  L+ PAEA L A QSLA+AL+W  VS +EMGLGI+ SF MAVLG 
Subjt:  SSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGV

Query:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG
        +KNVVFGSF E GSAFGGLLDK KAS EG SL EQ+REI+G V  K+LD VL+TA SSAG
Subjt:  VKNVVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTGTTCTTCTTCTTCTTCTTCTTCTTGTTCCATTATTCCTCCCTTAGCTTCAACTCTTCTCCTCCTCCTCCTCCTAATCCCATCTCTCAAACTCCTCATCAATGG
CCTCAACTCCCTATCCACTCTGGCTCTCTGCCTGTTCTTCAAGGCTCCACCTTGCGTTCTTCTCTCACTTCTCAAGGGCCTCAAGCTCCCTGCAGAGGCCCTTCTCAGCG
CGTCTCAGAGCCTTGCCGAAGCCTTGAGGTGGGCTCTGGTGAGCGCGATCGAGATGGGTTTGGGGATTTTGAGCTCTTTTGCCATGGCCGTGTTGGGGGTTGTGAAGAAT
GTGGTTTTTGGTTCTTTTGCTGAGTCTGGTTCGGCCTTTGGTGGCCTTTTGGACAAGACTAAGGCTTCTTGGGAAGGGTCGTCCTTGTTCGAACAACTGCGGGAGATTGT
TGGGAGCGTTTGTGAGAAGCTGCTTGACCAGGTTTTGGACACGGCTGCCTCTTCTGCAGGTAGGGATCGTGATATCGAGAATAATGTGCATGAAAAGTTCTTTTCTTTGT
TCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTGTTCTTCTTCTTCTTCTTCTTCTTGTTCCATTATTCCTCCCTTAGCTTCAACTCTTCTCCTCCTCCTCCTCCTAATCCCATCTCTCAAACTCCTCATCAATGG
CCTCAACTCCCTATCCACTCTGGCTCTCTGCCTGTTCTTCAAGGCTCCACCTTGCGTTCTTCTCTCACTTCTCAAGGGCCTCAAGCTCCCTGCAGAGGCCCTTCTCAGCG
CGTCTCAGAGCCTTGCCGAAGCCTTGAGGTGGGCTCTGGTGAGCGCGATCGAGATGGGTTTGGGGATTTTGAGCTCTTTTGCCATGGCCGTGTTGGGGGTTGTGAAGAAT
GTGGTTTTTGGTTCTTTTGCTGAGTCTGGTTCGGCCTTTGGTGGCCTTTTGGACAAGACTAAGGCTTCTTGGGAAGGGTCGTCCTTGTTCGAACAACTGCGGGAGATTGT
TGGGAGCGTTTGTGAGAAGCTGCTTGACCAGGTTTTGGACACGGCTGCCTCTTCTGCAGGTAGGGATCGTGATATCGAGAATAATGTGCATGAAAAGTTCTTTTCTTTGT
TCTAG
Protein sequenceShow/hide protein sequence
MSCSSSSSSSCSIIPPLASTLLLLLLLIPSLKLLINGLNSLSTLALCLFFKAPPCVLLSLLKGLKLPAEALLSASQSLAEALRWALVSAIEMGLGILSSFAMAVLGVVKN
VVFGSFAESGSAFGGLLDKTKASWEGSSLFEQLREIVGSVCEKLLDQVLDTAASSAGRDRDIENNVHEKFFSLF