CuGenDBv2

Gene ID	Lag0002061
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	transcription initiation factor TFIID subunit 1
Genome location	chr4:38882757..38884706
RNA-Seq Expression	Lag0002061
Synteny	Lag0002061
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process) GO:0005669 - transcription factor TFIID complex (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function) GO:0017025 - TBP-class protein binding (molecular function)
InterPro domains	IPR040240 - Transcription initiation factor TFIID subunit 1

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008458065.1 PREDICTED: transcription initiation factor TFIID subunit 1 isoform X1 [Cucumis melo]

5.9e-31

85.71

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS
        DYDAKAEDAVDYEDIDEEYDGPEIEA GEEDHLLP++EYFSAEVSLA LEPT  VFDDEDYDEDFEKV D+VN+S+E Q IHAS
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS

XP_011659205.1 transcription initiation factor TFIID subunit 1 [Cucumis sativus]

3.4e-31

86.9

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS
        DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLP++EYFSAEVSL+ LEPT SVFDDEDYDEDFE V DVVN+S+E Q IHAS
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS

XP_022155093.1 transcription initiation factor TFIID subunit 1 [Momordica charantia]

2.2e-33

91.67

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS
        DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFS EVSLA LEPTVSVFDDEDYDEDFEKV DV+NSS+EA+T HAS
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS

XP_038899362.1 transcription initiation factor TFIID subunit 1 isoform X1 [Benincasa hispida]

1.2e-31

88.1

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS
        DYDAKAEDA+DYEDIDEEYDGPEIEA GEEDHLLPK+EYFSAEVSLA LEPT SVFDDEDYDEDFEKV DVVN + EAQ IHAS
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS

XP_038899368.1 transcription initiation factor TFIID subunit 1 isoform X2 [Benincasa hispida]

1.2e-31

88.1

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS
        DYDAKAEDA+DYEDIDEEYDGPEIEA GEEDHLLPK+EYFSAEVSLA LEPT SVFDDEDYDEDFEKV DVVN + EAQ IHAS
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA05 Uncharacterized protein

1.7e-31

86.9

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS
        DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLP++EYFSAEVSL+ LEPT SVFDDEDYDEDFE V DVVN+S+E Q IHAS
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS

A0A1S3C886 transcription initiation factor TFIID subunit 1 isoform X1

2.8e-31

85.71

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS
        DYDAKAEDAVDYEDIDEEYDGPEIEA GEEDHLLP++EYFSAEVSLA LEPT  VFDDEDYDEDFEKV D+VN+S+E Q IHAS
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS

A0A5A7SLH8 Transcription initiation factor TFIID subunit 1 isoform X1

2.8e-31

85.71

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS
        DYDAKAEDAVDYEDIDEEYDGPEIEA GEEDHLLP++EYFSAEVSLA LEPT  VFDDEDYDEDFEKV D+VN+S+E Q IHAS
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS

A0A6J1DM24 transcription initiation factor TFIID subunit 1

1.0e-33

91.67

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS
        DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFS EVSLA LEPTVSVFDDEDYDEDFEKV DV+NSS+EA+T HAS
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS

A0A6J1L0S9 transcription initiation factor TFIID subunit 1 isoform X1

8.3e-31

75.73

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Query:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS--------VSSNGVIA
        DYDAKAEDA+DYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSL  LEPT SVFDDEDYDED EKV +V N S+ A TIHAS        V S G  +
Subjt:  DYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHAS--------VSSNGVIA

Query:  FAE
        FAE
Subjt:  FAE

SwissProt top hits

e value

%identity

Alignment

Q67W65 Transcription initiation factor TFIID subunit 1

9.8e-21

68.92

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Query:  PNSRDYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQD
        P+ +DYDAKAEDAVDYEDIDEEYDGPE+EAA EEDHLL KK+YFS+    A +   VSVFD+E+YDED E   D
Subjt:  PNSRDYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQD

Q6PUA2 Transcription initiation factor TFIID subunit 1b

1.8e-11

64.81

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Query:  VDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDE
        VDY   DEEYDGPE++   EEDHLLPK+EY SA  +L+ L    SVFDDEDYDE
Subjt:  VDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDE

Q8LRK9 Transcription initiation factor TFIID subunit 1

2.0e-21

62.35

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Query:  PNSRDYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQD--VVNSSIEAQ
        P  +DYD KAEDAVDYEDIDEEYDGPE++   EEDHLLPKKEYFS  V+L  L+   SVFDDEDYDE+ E+ ++   V  S+E +
Subjt:  PNSRDYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQD--VVNSSIEAQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G32750.1 HAC13 protein (HAC13)

1.4e-22

62.35

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Query:  PNSRDYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQD--VVNSSIEAQ
        P  +DYD KAEDAVDYEDIDEEYDGPE++   EEDHLLPKKEYFS  V+L  L+   SVFDDEDYDE+ E+ ++   V  S+E +
Subjt:  PNSRDYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQD--VVNSSIEAQ

AT3G19040.1 histone acetyltransferase of the TAFII250 family 2

1.3e-12

64.81

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Query:  VDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDE
        VDY   DEEYDGPE++   EEDHLLPK+EY SA  +L+ L    SVFDDEDYDE
Subjt:  VDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDE

Sequences

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CDS sequence

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ATGGTTTTCCTACCACCTCCCAACTCACGAGATTATGATGCGAAGGCTGAAGATGCAGTTGACTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGATTGAAGCTGC
TGGAGAGGAAGACCACTTATTGCCAAAAAAAGAATATTTTTCTGCCGAAGTTTCTTTGGCTAAGCTGGAGCCTACAGTTTCTGTATTTGATGATGAAGATTATGATGAGG
ACTTTGAAAAGGTACAGGACGTTGTAAATAGCAGCATTGAAGCTCAAACCATCCATGCATCAGTTAGTAGTAATGGTGTTATAGCATTTGCAGAACCGTTTTTATGGTTG
AATGAGTTTGGTTGA

mRNA sequence

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Protein sequence

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MVFLPPPNSRDYDAKAEDAVDYEDIDEEYDGPEIEAAGEEDHLLPKKEYFSAEVSLAKLEPTVSVFDDEDYDEDFEKVQDVVNSSIEAQTIHASVSSNGVIAFAEPFLWL
NEFG

Lag0002061 (gene) of Sponge gourd (AG-4) v1 genome