; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002063 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002063
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:38902367..38903652
RNA-Seq ExpressionLag0002063
SyntenyLag0002063
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]3.7e-6637.13Show/hide
Query:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL
        SG+ IN +KS +LGI+     L  +  ++GC+ G WP  YLGLPLGGN + + FW PV+++++ +L  WK + +SKGGR TL QAVLSS+P YY+SLFK+
Subjt:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL

Query:  PRKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQ----------------RSSHKSPW
        P  V   +++L+R+F WEG                 S+ EG               AK+   +    +S+W  II+                + S ++PW
Subjt:  PRKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQ----------------RSSHKSPW

Query:  RLISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----TAWDLSLRRNLNDLETEEWVELSLILSSISL-Q
        R IS            S+GNG    FW D WL  GIL   FPRLY L+ R    +   W A+       WD   RRNL++ E  E V L  IL ++ L  
Subjt:  RLISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----TAWDLSLRRNLNDLETEEWVELSLILSSISL-Q

Query:  NRNDSWSWPLESSNIFSVKSLLKDLVDYPVIEANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFA
        +R D  SW +E    FS KS    L+    +    Y+ IW    P KI+ F+W  ++G INT D +QRR P   LSPSWC+ C   +E+  HLF+HCS++
Subjt:  NRNDSWSWPLESSNIFSVKSLLKDLVDYPVIEANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFA

Query:  SRYW
         + W
Subjt:  SRYW

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.1e-6433.5Show/hide
Query:  ASGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFK
        ASGLNIN SKS +  I++     + +  ++G  +G  P++YLG+PLGG   +  FW  V+++IQ KL +WKYS +SKGGR TL  + L S+PIY +S+FK
Subjt:  ASGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFK

Query:  LPRKVARSLDKLLRDFFWEG-SRGEG---------------------------------------------------AKYYNSNLSSVWPSIIQRSSHKS
        +P+ +A+ ++   R+F W G S G                                                     +KY    + S +PS  + SS+ S
Subjt:  LPRKVARSLDKLLRDFFWEG-SRGEG---------------------------------------------------AKYYNSNLSSVWPSIIQRSSHKS

Query:  PWRLISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISLQNRN
        PW+ ++  +   Y      + +G   SFW D+W     L+   PRL+ L+   +  V E W  S   W L + R L D E   W  +   L +      +
Subjt:  PWRLISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISLQNRN

Query:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA----NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSF
            W L S+NIF   S+ + + + P+  A    NLYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+WC MC    E   HLF+HC +
Subjt:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA----NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSF

Query:  ASRYWSEIR
        + + WS+ +
Subjt:  ASRYWSEIR

TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]1.6e-6434.7Show/hide
Query:  GLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLP
        GL IN +K  + GI+ +  +L  L  ++GC+ G WP  YLGLPLGG  + + FW PV+E+++ +L SWK +++S+GGR TL Q+VL S+PIYY+SLFK+P
Subjt:  GLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLP

Query:  RKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQ----------------RSSHKSPWR
          V   L+KL++ F WEG                 S+ EG               AK+   +     S+W  +I+                R S +SPW+
Subjt:  RKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQ----------------RSSHKSPWR

Query:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN
         ISS   L     +  +GNG    FW D WL  G L   FPRL+ L+      +     +  +  +W+   RRNLN+ E EE   L   +  + L Q+R 
Subjt:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN

Query:  DSWSWPLESSNIFSVKSLLKDLVDYPVIE-ANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR
        D+  W LE+S +F+ KS    L +  +++    Y  IW    P K+KI +W ++ G +NT D++QRR     LSP WC +C A  E   H+F+HCS+  +
Subjt:  DSWSWPLESSNIFSVKSLLKDLVDYPVIE-ANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR

Query:  YW----SEIRCFWMV
         W     E+R  W++
Subjt:  YW----SEIRCFWMV

VVA20721.1 Hypothetical predicted protein, partial [Prunus dulcis]1.6e-6434.62Show/hide
Query:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL
        SG+ IN SK  ++GI+L+D  +  L   +GC+ G+WP  YLGLPLGGN + I FW PV+E+++++L  WK + +SKGGR T+ QAVL S+PIYY+SLF++
Subjt:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL

Query:  PRKVARSLDKLLRDFFWEGSRGEG-----------AKY-----------------------YNSNLSSVWPSIIQ----------------RSSHKSPWR
        P  VA  ++ L+RDF WEG  G+            AK+                       + +   ++W  +I+                R S +SPWR
Subjt:  PRKVARSLDKLLRDFFWEGSRGEG-----------AKY-----------------------YNSNLSSVWPSIIQ----------------RSSHKSPWR

Query:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN
         ISS  +L       ++G G+   FW D W   G+L   FPRL+ L+ +    +    +      +WD   RRNLN+LE  E   L  +L  + L  +R 
Subjt:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN

Query:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA-NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR
        D   W L+ S +F+  SL   + +    E    Y  IW    P K+KIF+W+   G +NT D LQRR P+  +SP WC +C    +   HL +HC F+ +
Subjt:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA-NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR

Query:  YW----SEIRCFW
         W     E+   W
Subjt:  YW----SEIRCFW

VVA39726.1 Hypothetical predicted protein, partial [Prunus dulcis]2.1e-6434.46Show/hide
Query:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL
        S + IN SK  ++GI+L+D  +  L   +GC+ G+WP  YLGLPLGGN + I FW PV+E+++++L  WK + +SKGGR T+ QAVL S+PIYY+SLF++
Subjt:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL

Query:  PRKVARSLDKLLRDFFWEGSRGE-----------GAKY-----------------------YNSNLSSVWPSIIQ----------------RSSHKSPWR
        P  VA  ++KL+RDF WEG  G+            AK+                       + +   ++W  +I+                R S +SPWR
Subjt:  PRKVARSLDKLLRDFFWEGSRGE-----------GAKY-----------------------YNSNLSSVWPSIIQ----------------RSSHKSPWR

Query:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIAS--QTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN
         ISS  +L        +G G+   FW D W   G+L   FPRL+ L+ +    +     +     +WD   RRNLN+LE  E   L  +L  + L  +R 
Subjt:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIAS--QTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN

Query:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA-NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR
        D   W L+ S +F+  SL   + +    E    Y  IW    P K+KIF+W+   G +NT D LQRR P+  +SP WC +C    +   HL +HC F+ +
Subjt:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA-NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR

Query:  YW----SEIRCFWMV
         W     E+   W++
Subjt:  YW----SEIRCFWMV

TrEMBL top hitse value%identityAlignment
A0A540M4H0 zf-RVT domain-containing protein7.6e-6534.7Show/hide
Query:  GLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLP
        GL IN +K  + GI+ +  +L  L  ++GC+ G WP  YLGLPLGG  + + FW PV+E+++ +L SWK +++S+GGR TL Q+VL S+PIYY+SLFK+P
Subjt:  GLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLP

Query:  RKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQ----------------RSSHKSPWR
          V   L+KL++ F WEG                 S+ EG               AK+   +     S+W  +I+                R S +SPW+
Subjt:  RKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQ----------------RSSHKSPWR

Query:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN
         ISS   L     +  +GNG    FW D WL  G L   FPRL+ L+      +     +  +  +W+   RRNLN+ E EE   L   +  + L Q+R 
Subjt:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN

Query:  DSWSWPLESSNIFSVKSLLKDLVDYPVIE-ANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR
        D+  W LE+S +F+ KS    L +  +++    Y  IW    P K+KI +W ++ G +NT D++QRR     LSP WC +C A  E   H+F+HCS+  +
Subjt:  DSWSWPLESSNIFSVKSLLKDLVDYPVIE-ANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR

Query:  YW----SEIRCFWMV
         W     E+R  W++
Subjt:  YW----SEIRCFWMV

A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein9.9e-6533.5Show/hide
Query:  ASGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFK
        ASGLNIN SKS +  I++     + +  ++G  +G  P++YLG+PLGG   +  FW  V+++IQ KL +WKYS +SKGGR TL  + L S+PIY +S+FK
Subjt:  ASGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFK

Query:  LPRKVARSLDKLLRDFFWEG-SRGEG---------------------------------------------------AKYYNSNLSSVWPSIIQRSSHKS
        +P+ +A+ ++   R+F W G S G                                                     +KY    + S +PS  + SS+ S
Subjt:  LPRKVARSLDKLLRDFFWEG-SRGEG---------------------------------------------------AKYYNSNLSSVWPSIIQRSSHKS

Query:  PWRLISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISLQNRN
        PW+ ++  +   Y      + +G   SFW D+W     L+   PRL+ L+   +  V E W  S   W L + R L D E   W  +   L +      +
Subjt:  PWRLISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISLQNRN

Query:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA----NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSF
            W L S+NIF   S+ + + + P+  A    NLYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+WC MC    E   HLF+HC +
Subjt:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA----NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSF

Query:  ASRYWSEIR
        + + WS+ +
Subjt:  ASRYWSEIR

A0A5E4F237 zf-RVT domain-containing protein (Fragment)7.6e-6534.62Show/hide
Query:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL
        SG+ IN SK  ++GI+L+D  +  L   +GC+ G+WP  YLGLPLGGN + I FW PV+E+++++L  WK + +SKGGR T+ QAVL S+PIYY+SLF++
Subjt:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL

Query:  PRKVARSLDKLLRDFFWEGSRGEG-----------AKY-----------------------YNSNLSSVWPSIIQ----------------RSSHKSPWR
        P  VA  ++ L+RDF WEG  G+            AK+                       + +   ++W  +I+                R S +SPWR
Subjt:  PRKVARSLDKLLRDFFWEGSRGEG-----------AKY-----------------------YNSNLSSVWPSIIQ----------------RSSHKSPWR

Query:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN
         ISS  +L       ++G G+   FW D W   G+L   FPRL+ L+ +    +    +      +WD   RRNLN+LE  E   L  +L  + L  +R 
Subjt:  LISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGE--TWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISL-QNRN

Query:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA-NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR
        D   W L+ S +F+  SL   + +    E    Y  IW    P K+KIF+W+   G +NT D LQRR P+  +SP WC +C    +   HL +HC F+ +
Subjt:  DSWSWPLESSNIFSVKSLLKDLVDYPVIEA-NLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASR

Query:  YW----SEIRCFW
         W     E+   W
Subjt:  YW----SEIRCFW

A0A5H2XQW2 TatD related DNase1.8e-6637.13Show/hide
Query:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL
        SG+ IN +KS +LGI+     L  +  ++GC+ G WP  YLGLPLGGN + + FW PV+++++ +L  WK + +SKGGR TL QAVLSS+P YY+SLFK+
Subjt:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL

Query:  PRKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQ----------------RSSHKSPW
        P  V   +++L+R+F WEG                 S+ EG               AK+   +    +S+W  II+                + S ++PW
Subjt:  PRKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQ----------------RSSHKSPW

Query:  RLISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----TAWDLSLRRNLNDLETEEWVELSLILSSISL-Q
        R IS            S+GNG    FW D WL  GIL   FPRLY L+ R    +   W A+       WD   RRNL++ E  E V L  IL ++ L  
Subjt:  RLISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----TAWDLSLRRNLNDLETEEWVELSLILSSISL-Q

Query:  NRNDSWSWPLESSNIFSVKSLLKDLVDYPVIEANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFA
        +R D  SW +E    FS KS    L+    +    Y+ IW    P KI+ F+W  ++G INT D +QRR P   LSPSWC+ C   +E+  HLF+HCS++
Subjt:  NRNDSWSWPLESSNIFSVKSLLKDLVDYPVIEANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFA

Query:  SRYW
         + W
Subjt:  SRYW

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)1.5e-6538.21Show/hide
Query:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL
        SG+ IN +KS +LGI+     L  +  ++GC+ G WP  YLGLPLGGN + + FW PV+E+++ +L  WK + +SKGGR TL QAVLSS+P YY+SLFK+
Subjt:  SGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKL

Query:  PRKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQR----SSHKSPWRLISSTMDLVYS
        P  VA  +++L+R+F WEG                 S+ EG               AK+   +    +S+W  II+      S+ +PWR IS   +    
Subjt:  PRKVARSLDKLLRDFFWEG-----------------SRGEG---------------AKY---YNSNLSSVWPSIIQR----SSHKSPWRLISSTMDLVYS

Query:  RAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVG--ETWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISLQ-NRNDSWSWPLESSN
            S+GNG    FW D WL  GIL   FPRL  L+ R    +            WD   RRNL++ E  E V L  IL ++ L  +R D  SW +E   
Subjt:  RAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVG--ETWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISLQ-NRNDSWSWPLESSN

Query:  IFSVKSLLKDLVDYPVIEANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASRYW
         FS KS    L+         +  IW    P KI+ F+W  ++G INT D +QRR P   LSPSWC++C   +E+  HLF+HCS++ R W
Subjt:  IFSVKSLLKDLVDYPVIEANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAAGSEHSGHLFVHCSFASRYW

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.2e-2026.21Show/hide
Query:  VIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFW----------------------EGSRG-EGAKYYNSNL--
        ++ER+  ++  W+   +S  GR TL++AVLSSMP++ +S   LP+ +   LD+L R F W                      EG  G   AK  N  L  
Subjt:  VIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFW----------------------EGSRG-EGAKYYNSNL--

Query:  ----------SSVWPSIIQRSSH----------------KSPWRLIS-STMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVG
                  +S+W  ++Q+  H                 S WR I+    D+V        G+G    FW D W+S G          R TD    +  
Subjt:  ----------SSVWPSIIQRSSH----------------KSPWRLIS-STMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVG

Query:  ETWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKS----LLKDLVDYPVIEANLYKIIWADSYPKKIKIFLWELSH
        + WI  +  WD +         T   +EL  ++  + +    D  SW       FSV+S    L  D V  P + A+ +  +W    P+++K FLW + +
Subjt:  ETWIASQTAWDLSLRRNLNDLETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKS----LLKDLVDYPVIEANLYKIIWADSYPKKIKIFLWELSH

Query:  GAINTADRLQRRMPHFHLSPS-WCIMCAAGSEHSGHLFVHCSFASRYWSEI
         A+ T +   RR    HLS S  C +C  G E   H+   C      W  +
Subjt:  GAINTADRLQRRMPHFHLSPS-WCIMCAAGSEHSGHLFVHCSFASRYWSEI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAGTTGGCCCAAGCTTTCATCGTGTTGGCTTCTGGGCTGAATATTAACTATTCCAAGAGTGAGGTTCTGGGAATTCATTTAGAAGATTCGGAATTGGAATGGTT
GACATCAACATTTGGCTGTAAACAAGGGATTTGGCCCTCCAATTACCTTGGTTTACCTTTGGGAGGCAACGCAAAAACTATACCTTTTTGGCAGCCAGTGATTGAAAGAA
TCCAACATAAGCTTCATAGTTGGAAATATTCCTATATTTCGAAAGGTGGTCGACATACTCTTTCTCAAGCAGTTCTATCTAGTATGCCAATATATTATTTATCCTTATTC
AAATTGCCAAGAAAGGTTGCAAGATCTCTTGATAAGCTGCTTCGTGATTTCTTTTGGGAAGGATCTAGAGGTGAGGGTGCTAAGTATTATAACTCTAATTTGAGTAGTGT
TTGGCCTAGCATTATTCAGAGAAGTTCACACAAATCTCCTTGGCGATTAATTTCTTCTACTATGGACCTGGTATATTCTCGCGCTGAAAGAAGTTTGGGTAATGGTCTCG
CTACATCTTTCTGGCATGATTCATGGTTAAGTTGTGGTATTCTGGCTACAAATTTTCCTCGTCTTTATCGTTTAACTGATCGTCCGAGGAGTTTGGTTGGTGAGACATGG
ATTGCTTCTCAAACAGCATGGGACCTGAGTCTTAGGCGAAATTTGAATGATTTAGAGACAGAAGAATGGGTGGAATTATCTCTTATTCTTTCCTCCATCAGCCTTCAGAA
CCGTAATGATTCCTGGTCATGGCCATTGGAATCGTCCAATATTTTTTCTGTTAAATCCCTTTTGAAGGATCTTGTAGACTATCCAGTTATTGAGGCTAATCTTTATAAGA
TAATTTGGGCCGATTCCTATCCAAAGAAGATCAAGATTTTTCTATGGGAGCTTAGTCATGGTGCTATTAATACAGCTGATCGACTTCAACGTCGGATGCCTCATTTTCAT
TTGTCCCCATCTTGGTGCATTATGTGTGCCGCTGGTTCAGAACATTCTGGCCACCTATTTGTTCACTGTTCCTTCGCTTCCAGATATTGGTCAGAGATTCGATGCTTTTG
GATGGTCCACCGTTTTTCCAAATTGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAAGTTGGCCCAAGCTTTCATCGTGTTGGCTTCTGGGCTGAATATTAACTATTCCAAGAGTGAGGTTCTGGGAATTCATTTAGAAGATTCGGAATTGGAATGGTT
GACATCAACATTTGGCTGTAAACAAGGGATTTGGCCCTCCAATTACCTTGGTTTACCTTTGGGAGGCAACGCAAAAACTATACCTTTTTGGCAGCCAGTGATTGAAAGAA
TCCAACATAAGCTTCATAGTTGGAAATATTCCTATATTTCGAAAGGTGGTCGACATACTCTTTCTCAAGCAGTTCTATCTAGTATGCCAATATATTATTTATCCTTATTC
AAATTGCCAAGAAAGGTTGCAAGATCTCTTGATAAGCTGCTTCGTGATTTCTTTTGGGAAGGATCTAGAGGTGAGGGTGCTAAGTATTATAACTCTAATTTGAGTAGTGT
TTGGCCTAGCATTATTCAGAGAAGTTCACACAAATCTCCTTGGCGATTAATTTCTTCTACTATGGACCTGGTATATTCTCGCGCTGAAAGAAGTTTGGGTAATGGTCTCG
CTACATCTTTCTGGCATGATTCATGGTTAAGTTGTGGTATTCTGGCTACAAATTTTCCTCGTCTTTATCGTTTAACTGATCGTCCGAGGAGTTTGGTTGGTGAGACATGG
ATTGCTTCTCAAACAGCATGGGACCTGAGTCTTAGGCGAAATTTGAATGATTTAGAGACAGAAGAATGGGTGGAATTATCTCTTATTCTTTCCTCCATCAGCCTTCAGAA
CCGTAATGATTCCTGGTCATGGCCATTGGAATCGTCCAATATTTTTTCTGTTAAATCCCTTTTGAAGGATCTTGTAGACTATCCAGTTATTGAGGCTAATCTTTATAAGA
TAATTTGGGCCGATTCCTATCCAAAGAAGATCAAGATTTTTCTATGGGAGCTTAGTCATGGTGCTATTAATACAGCTGATCGACTTCAACGTCGGATGCCTCATTTTCAT
TTGTCCCCATCTTGGTGCATTATGTGTGCCGCTGGTTCAGAACATTCTGGCCACCTATTTGTTCACTGTTCCTTCGCTTCCAGATATTGGTCAGAGATTCGATGCTTTTG
GATGGTCCACCGTTTTTCCAAATTGCATTAA
Protein sequenceShow/hide protein sequence
MNKLAQAFIVLASGLNINYSKSEVLGIHLEDSELEWLTSTFGCKQGIWPSNYLGLPLGGNAKTIPFWQPVIERIQHKLHSWKYSYISKGGRHTLSQAVLSSMPIYYLSLF
KLPRKVARSLDKLLRDFFWEGSRGEGAKYYNSNLSSVWPSIIQRSSHKSPWRLISSTMDLVYSRAERSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETW
IASQTAWDLSLRRNLNDLETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKSLLKDLVDYPVIEANLYKIIWADSYPKKIKIFLWELSHGAINTADRLQRRMPHFH
LSPSWCIMCAAGSEHSGHLFVHCSFASRYWSEIRCFWMVHRFSKLH