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Lag0002076 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002076
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionWound-inducible basic
Genome locationchr4:39067719..39070964
RNA-Seq ExpressionLag0002076
SyntenyLag0002076
Gene Ontology termsNA
InterPro domainsIPR012643 - Wound-inducible basic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025423.1 Wound-induced basic protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-0963.01Show/hide
Query:  AAQYGSIKIKP-------------FYLKT-VRSKLGFRFVKAQYSSP--IMIYDVNSPLFRSFLSQKGGPSDK
        AAQYGSIK +              FY K   RSKLGFR VKAQ SSP  IMIYDVNS LFRSFLSQKGG SD+
Subjt:  AAQYGSIKIKP-------------FYLKT-VRSKLGFRFVKAQYSSP--IMIYDVNSPLFRSFLSQKGGPSDK
PPD73919.1 hypothetical protein GOBAR_DD29164 [Gossypium barbadense]8.1e-0472.22Show/hide
Query:  MIYDVNSPLFRSFLSQKGGPSDKSEVPTVLKICGSN
        MIYDVNSPLFRSFLSQKGG SDKS  P     C +N
Subjt:  MIYDVNSPLFRSFLSQKGGPSDKSEVPTVLKICGSN
TrEMBL top hitse value%identityAlignment
A0A103XNY9 Wound-inducible basic6.7e-0463.83Show/hide
Query:  SKLGF----RFVKAQYSSP----IMIYDVNSPLFRSFLSQKGGPSDK
        +KLGF    +F   QY  P     MIYDVNSPLFRSFLSQKGG SDK
Subjt:  SKLGF----RFVKAQYSSP----IMIYDVNSPLFRSFLSQKGGPSDK
A0A498JQ15 Uncharacterized protein5.1e-0461.54Show/hide
Query:  KTVRSKLGFRF----VKAQYSSPI--MIYDVNSPLFRSFLSQKGGPSDKSEV
        K +R KLG  F    V  Q S  I  MIYDVNSPLFRSFLSQKGG SDK ++
Subjt:  KTVRSKLGFRF----VKAQYSSPI--MIYDVNSPLFRSFLSQKGGPSDKSEV
SwissProt top hitse value%identityAlignment
Q09020 Wound-induced basic protein4.4e-0595.65Show/hide
Query:  MIYDVNSPLFRSFLSQKGGPSDK
        MIYDVNSPLFRSFLSQKGG SDK
Subjt:  MIYDVNSPLFRSFLSQKGGPSDK
Arabidopsis top hitse value%identityAlignment
AT3G07230.1 wound-responsive protein-related1.3e-0476.92Show/hide
Query:  MIYDVNSPLFRSFLSQKGGPSDKSEV
        MIYDVNS LFRSFLSQKG  SDK ++
Subjt:  MIYDVNSPLFRSFLSQKGGPSDKSEV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCGGCGGCCCAATATGGTTCTATAAAAATAAAGCCTTTCTATTTGAAAACTGTTCGCAGCAAATTAGGGTTTCGTTTTGTGAAAGCTCAATATTCATCACCGAT
AATGATTTACGACGTCAACTCCCCTCTCTTCCGCTCCTTCCTCAGCCAGAAAGGAGGCCCTTCCGACAAGAGTGAAGTGCCTACAGTTCTAAAGATCTGTGGATCTAATT
TCCAAAAGGTGTTGCAAGTTGCAGCTAAGCAGAAGCATGTTAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCCGGCGGCCCAATATGGTTCTATAAAAATAAAGCCTTTCTATTTGAAAACTGTTCGCAGCAAATTAGGGTTTCGTTTTGTGAAAGCTCAATATTCATCACCGAT
AATGATTTACGACGTCAACTCCCCTCTCTTCCGCTCCTTCCTCAGCCAGAAAGGAGGCCCTTCCGACAAGAGTGAAGTGCCTACAGTTCTAAAGATCTGTGGATCTAATT
TCCAAAAGGTGTTGCAAGTTGCAGCTAAGCAGAAGCATGTTAGCTAG
Protein sequenceShow/hide protein sequence
MNPAAQYGSIKIKPFYLKTVRSKLGFRFVKAQYSSPIMIYDVNSPLFRSFLSQKGGPSDKSEVPTVLKICGSNFQKVLQVAAKQKHVS