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Lag0002094 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002094
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:39209191..39210667
RNA-Seq ExpressionLag0002094
SyntenyLag0002094
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023929193.1 uncharacterized protein LOC112040541 [Quercus suber]8.0e-3432.88Show/hide
Query:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI
        W C G     FN +L   EKEGG  +  + +  FRD +D+C  VDLG+ G  FTW  RR G E + ER+DR   N  W   FP   V HL    SDHRPI
Subjt:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI

Query:  LLSV--------------------------SPLANSVGGANI-ASPVGLKT-VTEQCLASLARWGKGKIGRYGDRIRE------------------ASAK
        LLS+                          S + ++V   N   SP+ + T    +C   L  W + + G    +I++                     K
Subjt:  LLSV--------------------------SPLANSVGGANI-ASPVGLKT-VTEQCLASLARWGKGKIGRYGDRIRE------------------ASAK

Query:  KRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY
        +RN I+GL D  G WH+D   I  + + YF+ +++SSSP   D++R +  V   VT+++   L +P+ +EE+  A+  + P KAPG DGM   FY
Subjt:  KRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY

XP_024044510.1 uncharacterized protein LOC112100177 [Citrus clementina]1.6e-3435.29Show/hide
Query:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI
        W C G     FN +L  +EK GG+EK   E+N FR A+ +C + DLG  G  FTW NRR G   + E++DR   N  W   +  +  ++L    SDH PI
Subjt:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI

Query:  LLSVSPLANSVGGANIASPVGLKTVTEQCLASLARWGKGKIGRYGDR------IREASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPS
        ++ V                           S A W K      GDR       + ++ +K+N I+G+ D  GVW +D + +  L  DYF++I+++SSPS
Subjt:  LLSVSPLANSVGGANIASPVGLKTVTEQCLASLARWGKGKIGRYGDR------IREASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPS

Query:  MDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY
           +N  + +VPV V+ E+N +L + F++EEI  AL Q+ P KAPG DG+  AF+
Subjt:  MDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY

XP_030923509.1 uncharacterized protein LOC115950456 [Quercus lobata]5.7e-3227.19Show/hide
Query:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI
        W C+G     FN ++   EK GG  + + +++ FR+ + +C   DLGF G +FTWCN + G+  VL R+DR      W D + + +V HL  S SDH  +
Subjt:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI

Query:  LLSVSPLANS---------------------------VGGANIASPVGLKTVTEQCLASLARWGKGKIGRYGDRIRE-----------------------
        LL+ + +                              V   ++ SP G+      C  +L++W K   G+   +I+E                       
Subjt:  LLSVSPLANS---------------------------VGGANIASPVGLKTVTEQCLASLARWGKGKIGRYGDRIRE-----------------------

Query:  ---------------------------------------ASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTE
                                               +  +++NTI  + D  GVWH  P  I E+   YF ++YS++ P+   I   + S+P  V+E
Subjt:  ---------------------------------------ASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTE

Query:  EINRRLLRPFSREEIVRALGQIHPNKAPGPD
        E+N+ L++ F+REEI  AL Q+HP KAPGPD
Subjt:  EINRRLLRPFSREEIVRALGQIHPNKAPGPD

XP_030924930.1 uncharacterized protein LOC115951962 [Quercus lobata]4.4e-3234.09Show/hide
Query:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI
        W C G     FN IL   EK+G  ++PE ++ GF+DA+D C   DLGF G  FTWCNRRPG+  V  R+D     + W   FP   + HL+   SDHRPI
Subjt:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI

Query:  LLSVSPLANSV---GGANIASPVGLKTVTEQCLASLARWGKGKIGRYGDRIREA------------SAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFS
        LL            G       + LK  + + +   +     K   + D ++E                K N I GL D  GVW +D  ++  L S YF 
Subjt:  LLSVSPLANSV---GGANIASPVGLKTVTEQCLASLARWGKGKIGRYGDRIREA------------SAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFS

Query:  HIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY
         ++++S+P+    +  +  +  T+ +E+N  L +P   EE+++AL  + P  APGPDGMS  FY
Subjt:  HIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY

XP_030939839.1 uncharacterized protein LOC115964720 [Quercus lobata]2.2e-3634.86Show/hide
Query:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI
        W C G     F  I+   EK+GG ++ + +++GFR+ ++ C+ +D+G+ G  FTWCN R G + +   +DR      W+  F +  V HL  S SDH  +
Subjt:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI

Query:  LLS----VSP--------------------LANSVGGA--NIASPVGLKTVTEQCL--ASLARWGKGKIGRYGDR------IREASAKKRNTIRGLGDGL
        L+S    V P                    +      A  + ++P GL     +C    S  +W K      GDR       R +  KK+NTI GL D  
Subjt:  LLS----VSP--------------------LANSVGGA--NIASPVGLKTVTEQCL--ASLARWGKGKIGRYGDR------IREASAKKRNTIRGLGDGL

Query:  GVWHQDPKEILELVSDYFSHIYSSSSP-SMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY
        G W+     I E+   YF +IY+SS P S DD+    A++P  VT+E+NR L++ FS++EI+ AL Q+HP KAPGPDGMS  F+
Subjt:  GVWHQDPKEILELVSDYFSHIYSSSSP-SMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY

TrEMBL top hitse value%identityAlignment
A0A2N9EV35 Uncharacterized protein3.4e-3834.56Show/hide
Query:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI
        W C+G     FN I+ Q+EK G   +  A++  FR+  + C+++D+GF G +FTW N R G   V ERIDR F +  W + FP+  V+HL    SDH PI
Subjt:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI

Query:  LLSVSPLANSVGGAN---------IASP---------------VG-----LKTVTEQCLASLARWGKGKIG--------------RYGDRIRE------A
        L+ V    +++             IA+P               VG     L    ++C   L +W K K G              + GDR          
Subjt:  LLSVSPLANSVGGAN---------IASP---------------VG-----LKTVTEQCLASLARWGKGKIG--------------RYGDRIRE------A

Query:  SAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY
          KK NT+ GL D    W  DP  +  + +DYF  ++++S+PS   I+  + +V   VT E+NRRLL P++  EI RAL Q+HP+K+PGPDGMS  F+
Subjt:  SAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY

A0A2N9GL12 Reverse transcriptase domain-containing protein3.4e-3834.56Show/hide
Query:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI
        W C+G     FN I+ Q+EK G   +  A++  FR+  + C+++D+GF G +FTW N R G   V ERIDR F +  W + FP+  V+HL    SDH PI
Subjt:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI

Query:  LLSVSPLANSVGGAN---------IASP---------------VG-----LKTVTEQCLASLARWGKGKIG--------------RYGDRIRE------A
        L+ V    +++             IA+P               VG     L    ++C   L +W K K G              + GDR          
Subjt:  LLSVSPLANSVGGAN---------IASP---------------VG-----LKTVTEQCLASLARWGKGKIG--------------RYGDRIRE------A

Query:  SAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY
          KK NT+ GL D    W  DP  +  + +DYF  ++++S+PS   I+  + +V   VT E+NRRLL P++  EI RAL Q+HP+K+PGPDGMS  F+
Subjt:  SAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY

A0A2N9HFT1 Uncharacterized protein7.0e-3633.22Show/hide
Query:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI
        W C G     FN I+   EK+G   KPE+++  FR+A+D+C  +DLG++G  FTWCN R    TV E++DR   + AW  LFP   V HLD++ SDH+P+
Subjt:  WPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPI

Query:  LLS---------VSPL-----------------------------------ANSVGGANIASPVGLKTVTEQCLASLAR-W---GKGKIGRYGDR-----
         LS           P                                     NS+ G + A    L       LA   R W    + +  + GDR     
Subjt:  LLS---------VSPL-----------------------------------ANSVGGANIASPVGLKTVTEQCLASLAR-W---GKGKIGRYGDR-----

Query:  -IREASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSP-SMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMS
          R    ++RN+I GL D  G W  DP ++  L+  YF +I+ SS+P S+D + +CI   P  +T+ +N+ L RP++  E+  AL Q+ P  APGPDG+ 
Subjt:  -IREASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSP-SMDDINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMS

Query:  GAFY
          FY
Subjt:  GAFY

A0A7N2LIH6 Uncharacterized protein3.0e-3429.18Show/hide
Query:  GYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPILLSVSPLA
        G FN I+   EK G +++  A+++ FR+ + +C ++DLGFVG +FTWCN R G++  L R+DR   N AW  +FP  +V H+  S SDH  + L ++ + 
Subjt:  GYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPILLSVSPLA

Query:  NSVGG-------------------ANIA-------SPVGLKTVTEQCLASLARWGKGKIG----------------------------------------
        N   G                     +A       S + ++   E+C   L +W +   G                                        
Subjt:  NSVGG-------------------ANIA-------SPVGLKTVTEQCLASLARWGKGKIG----------------------------------------

Query:  ----------------RYGDR------IREASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRP
                        +YGD+         +  +++N I GL D LGVWH+D +   +L+ DYF  IYSS+ P+  D++  + ++   VT E+N  L + 
Subjt:  ----------------RYGDR------IREASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIASVPVTVTEEINRRLLRP

Query:  FSREEIVRALGQIHPNKAPGPDGMSGAFY
        F   E+ +AL Q+HP KAPGPDGMS  FY
Subjt:  FSREEIVRALGQIHPNKAPGPDGMSGAFY

A0A803Q852 Uncharacterized protein8.3e-3735.51Show/hide
Query:  GYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPILLS-VSPL
        G FN IL Q EK+GG++KP   +N FR A+D+C + ++ F G  FTWCN R  +  + ER+DR  GN  W D+FP  +V HL+   SDH P+LL+     
Subjt:  GYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQEVTHLDFSRSDHRPILLS-VSPL

Query:  ANSVGGANIASPVGLK---TVTEQCLASLARWGKGKIGRYGDRIREASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIAS
         +SV G    S    +      E C+  + +        +G  ++  S KK+N+I GL D    W    + +  +  +YF  ++++   S D++    + 
Subjt:  ANSVGGANIASPVGLK---TVTEQCLASLARWGKGKIGRYGDRIREASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMDDINRCIAS

Query:  VPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY
        VP  ++ E N  L+ PF+++++V+A+  IHP+KAPG DGM G FY
Subjt:  VPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACGGAATTCAGAAACTCGCCTGAGATTCTTGACCTTCGTGTTGACCGTTCTGGTAGGAGTGGGGGCTTGGCCTTGTTATGGGACTCTGAGGGGGTATTTCAATGC
GATATTGTTCCAACATGAAAAAGAAGGGGGCAGAGAGAAGCCTGAGGCAGAGTTGAATGGTTTTCGAGATGCAGTGGACGAGTGCAGTATGGTTGATCTGGGTTTTGTAG
GGGAGAAGTTTACGTGGTGTAACAGGAGACCTGGGGAGGAGACAGTTTTGGAACGGATTGACAGATGTTTTGGTAATATGGCTTGGCAGGATTTGTTCCCTCATCAGGAG
GTAACCCACTTGGATTTTAGCAGATCTGATCACAGACCGATTCTTTTGTCTGTATCTCCTCTAGCCAACTCGGTGGGAGGAGCCAATATCGCTTCACCGGTAGGTTTGAA
GACAGTTACTGAGCAGTGTTTGGCCTCCTTAGCTCGTTGGGGCAAAGGAAAGATTGGGAGGTATGGCGACCGTATCCGGGAAGCATCAGCGAAGAAACGCAACACCATTC
GGGGTCTTGGGGATGGTTTGGGTGTTTGGCACCAAGACCCGAAGGAGATTCTTGAGTTAGTTTCTGACTACTTCTCGCATATCTACTCGTCGAGTAGCCCATCTATGGAT
GACATTAATAGATGCATTGCCAGTGTGCCAGTGACTGTGACTGAGGAGATAAATAGGAGGCTGCTTAGGCCTTTTTCTCGAGAAGAGATTGTTAGGGCTCTGGGGCAAAT
CCATCCAAATAAGGCTCCTGGGCCAGATGGGATGTCAGGGGCGTTCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACGGAATTCAGAAACTCGCCTGAGATTCTTGACCTTCGTGTTGACCGTTCTGGTAGGAGTGGGGGCTTGGCCTTGTTATGGGACTCTGAGGGGGTATTTCAATGC
GATATTGTTCCAACATGAAAAAGAAGGGGGCAGAGAGAAGCCTGAGGCAGAGTTGAATGGTTTTCGAGATGCAGTGGACGAGTGCAGTATGGTTGATCTGGGTTTTGTAG
GGGAGAAGTTTACGTGGTGTAACAGGAGACCTGGGGAGGAGACAGTTTTGGAACGGATTGACAGATGTTTTGGTAATATGGCTTGGCAGGATTTGTTCCCTCATCAGGAG
GTAACCCACTTGGATTTTAGCAGATCTGATCACAGACCGATTCTTTTGTCTGTATCTCCTCTAGCCAACTCGGTGGGAGGAGCCAATATCGCTTCACCGGTAGGTTTGAA
GACAGTTACTGAGCAGTGTTTGGCCTCCTTAGCTCGTTGGGGCAAAGGAAAGATTGGGAGGTATGGCGACCGTATCCGGGAAGCATCAGCGAAGAAACGCAACACCATTC
GGGGTCTTGGGGATGGTTTGGGTGTTTGGCACCAAGACCCGAAGGAGATTCTTGAGTTAGTTTCTGACTACTTCTCGCATATCTACTCGTCGAGTAGCCCATCTATGGAT
GACATTAATAGATGCATTGCCAGTGTGCCAGTGACTGTGACTGAGGAGATAAATAGGAGGCTGCTTAGGCCTTTTTCTCGAGAAGAGATTGTTAGGGCTCTGGGGCAAAT
CCATCCAAATAAGGCTCCTGGGCCAGATGGGATGTCAGGGGCGTTCTACTGA
Protein sequenceShow/hide protein sequence
MGRNSETRLRFLTFVLTVLVGVGAWPCYGTLRGYFNAILFQHEKEGGREKPEAELNGFRDAVDECSMVDLGFVGEKFTWCNRRPGEETVLERIDRCFGNMAWQDLFPHQE
VTHLDFSRSDHRPILLSVSPLANSVGGANIASPVGLKTVTEQCLASLARWGKGKIGRYGDRIREASAKKRNTIRGLGDGLGVWHQDPKEILELVSDYFSHIYSSSSPSMD
DINRCIASVPVTVTEEINRRLLRPFSREEIVRALGQIHPNKAPGPDGMSGAFY