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Lag0002099 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002099
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr4:39283283..39287532
RNA-Seq ExpressionLag0002099
SyntenyLag0002099
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU75812.1 Ty3/gypsy retrotransposon protein [Tanacetum cinerariifolium]8.3e-1666.2Show/hide
Query:  LVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR
        LV LRPDPSPHVR SLP TQEVGFANTTLG S+SFY D      F +   HR HGP GLP V GI+PF G+
Subjt:  LVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR

KAF3452144.1 hypothetical protein FNV43_RR08242 [Rhamnella rubrinervis]7.7e-2275.68Show/hide
Query:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR
        MALLVTLRPDPSPHVRSS   TQEVGFANTTLG + SFYAD  P LAFWE  SHR HGP GLP V  ILPF G+
Subjt:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR

KAF7117295.1 hypothetical protein RHSIM_RhsimMtG0004300 [Rhododendron simsii]1.6e-1176.92Show/hide
Query:  SVNGMALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAF
        ++NGMALLVTLRPDPSPHVR S P TQEVGFANTTLG S SFYAD  P   F
Subjt:  SVNGMALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAF

KAG2394644.1 uncharacterized protein HKW66_Vig0079810 [Vigna angularis]3.5e-2274.68Show/hide
Query:  SVNGMALLVTLRPDPSPHVRSSLPTTQEVGFANT-TLGLSSSFYADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR
        ++NGMA LVTLRP  SPHVRSSLP TQEVGFANT TLG S SFYAD    LAFWE  SHRTHGP GLP V GILPF G+
Subjt:  SVNGMALLVTLRPDPSPHVRSSLPTTQEVGFANT-TLGLSSSFYADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR

YP_009382695.1 hypothetical protein AEK19_MT2262 [Utricularia reniformis]1.4e-1568Show/hide
Query:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSF-YADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR
        MALLVTLRPDPSPHV  S P TQEVGFANTT G S SF YAD      F E  SHR HGP GLP V  ILPF G+
Subjt:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSF-YADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR

TrEMBL top hitse value%identityAlignment
A0A1Y0B4U6 Uncharacterized protein6.8e-1668Show/hide
Query:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSF-YADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR
        MALLVTLRPDPSPHV  S P TQEVGFANTT G S SF YAD      F E  SHR HGP GLP V  ILPF G+
Subjt:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSF-YADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR

A0A218VQI3 Uncharacterized protein7.3e-1077.08Show/hide
Query:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAF
        MALLVTL PDPSPHVRSS P +QEVGFANTTLG S SFYAD  P   F
Subjt:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAF

A0A6A5L9I9 Uncharacterized protein9.0e-0879.55Show/hide
Query:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDP
        MALLVTLRP  SPHV SS P TQEVGFANTTLG S SFYAD  P
Subjt:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDP

A0A6L2MSW6 Ty3/gypsy retrotransposon protein4.0e-1666.2Show/hide
Query:  LVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR
        LV LRPDPSPHVR SLP TQEVGFANTTLG S+SFY D      F +   HR HGP GLP V GI+PF G+
Subjt:  LVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGR

A0A7J7GFN5 Uncharacterized protein5.6e-1084.09Show/hide
Query:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDP
        MALLVTLRPDPSPHVR S P TQEVGFANTTLG S SFYAD  P
Subjt:  MALLVTLRPDPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGGGTTGAACCATGCGGAACCGAGGTAGTCGGGGGCACCAAGGACCAAGCGGAGGCGGAAGCACTTCGGCCCGCTGGTCGGCCTCGGCCCATGGTCGAGGCCGA
GCAGGGGTTGGGCCAAGGCCCGACCCTCTGGCCCGTTTCTCCTCCAAAGTCCATCTTTTTGTCCTGTTTTCGAGCTCGTGCCATGTTGTCCTCACCAATTCCTTACGCTT
CGGAGTGGTCCAAAATTACCTATAACAATATATGGGAAGACATGATAATTGTAGATTCAGATCACTTGAATAGTGTAAATGGAATGGCTCTCTTAGTTACGTTGCGCCCT
GACCCGAGTCCCCATGTCCGCTCTTCTCTACCCACAACCCAAGAAGTTGGCTTTGCCAACACAACATTAGGGTTGTCCTCTTCATTCTATGCTGACTCCGACCCCAGGCT
GGCTTTTTGGGAAGTCCATTCCCATCGCACTCACGGCCCGACTGGCCTACCAATGGTAGGGGGAATTCTCCCATTCTCTGGTCGAGGGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTGGGTTGAACCATGCGGAACCGAGGTAGTCGGGGGCACCAAGGACCAAGCGGAGGCGGAAGCACTTCGGCCCGCTGGTCGGCCTCGGCCCATGGTCGAGGCCGA
GCAGGGGTTGGGCCAAGGCCCGACCCTCTGGCCCGTTTCTCCTCCAAAGTCCATCTTTTTGTCCTGTTTTCGAGCTCGTGCCATGTTGTCCTCACCAATTCCTTACGCTT
CGGAGTGGTCCAAAATTACCTATAACAATATATGGGAAGACATGATAATTGTAGATTCAGATCACTTGAATAGTGTAAATGGAATGGCTCTCTTAGTTACGTTGCGCCCT
GACCCGAGTCCCCATGTCCGCTCTTCTCTACCCACAACCCAAGAAGTTGGCTTTGCCAACACAACATTAGGGTTGTCCTCTTCATTCTATGCTGACTCCGACCCCAGGCT
GGCTTTTTGGGAAGTCCATTCCCATCGCACTCACGGCCCGACTGGCCTACCAATGGTAGGGGGAATTCTCCCATTCTCTGGTCGAGGGTCGTGA
Protein sequenceShow/hide protein sequence
MIWVEPCGTEVVGGTKDQAEAEALRPAGRPRPMVEAEQGLGQGPTLWPVSPPKSIFLSCFRARAMLSSPIPYASEWSKITYNNIWEDMIIVDSDHLNSVNGMALLVTLRP
DPSPHVRSSLPTTQEVGFANTTLGLSSSFYADSDPRLAFWEVHSHRTHGPTGLPMVGGILPFSGRGS