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Lag0002111 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002111
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description4F5 domain-containing protein
Genome locationchr4:39400741..39401267
RNA-Seq ExpressionLag0002111
SyntenyLag0002111
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR040211 - Small EDRK-rich factor 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KHN26512.1 hypothetical protein glysoja_047978, partial [Glycine soja]2.0e-2071.59Show/hide
Query:  MTHILSSFLLVFQFSH---LYFLERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK
        ++ IL +F L+  F +       +RGNQR+RDRERAQARAG K+KQP+NDGLTPEQRRERDAKALQEKTA+KAA AAGGNNAGGGGKK
Subjt:  MTHILSSFLLVFQFSH---LYFLERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK

KRH07555.1 hypothetical protein GLYMA_16G094600v4, partial [Glycine max]9.2e-2179.49Show/hide
Query:  LVFQFSHLYFL--ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK
        L    S+L F+  +RGNQR+RDRERAQARAG K+KQP+NDGLTPEQRRERDAKALQEKTA+KAA AAGGNNAGGGGKK
Subjt:  LVFQFSHLYFL--ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK

XP_022953785.1 putative SERF-like protein [Cucurbita moschata]7.0e-2195.31Show/hide
Query:  ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGK
        ERGNQRDRDRERAQARAG+K+KQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGG NAGGGGK
Subjt:  ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGK

XP_022991972.1 putative SERF-like protein [Cucurbita maxima]3.5e-2093.75Show/hide
Query:  ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGK
        ERGNQRDRDRERAQARAG+K+KQPRNDG TPEQRRERDAKALQEKTARKAAMAAGG NAGGGGK
Subjt:  ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGK

XP_023547529.1 putative SERF-like protein [Cucurbita pepo subsp. pepo]7.0e-2195.31Show/hide
Query:  ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGK
        ERGNQRDRDRERAQARAG+K+KQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGG NAGGGGK
Subjt:  ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGK

TrEMBL top hitse value%identityAlignment
A0A0B2R3P1 4F5 domain-containing protein (Fragment)9.9e-2171.59Show/hide
Query:  MTHILSSFLLVFQFSH---LYFLERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK
        ++ IL +F L+  F +       +RGNQR+RDRERAQARAG K+KQP+NDGLTPEQRRERDAKALQEKTA+KAA AAGGNNAGGGGKK
Subjt:  MTHILSSFLLVFQFSH---LYFLERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK

A0A0R0G092 4F5 domain-containing protein1.7e-2087.88Show/hide
Query:  LERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK
        + RGNQR+RDRERAQARAG K+KQP+NDGLTPEQRRERDAKALQEKTA+KAA AAGGNNAGGGGKK
Subjt:  LERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK

A0A445GGC4 4F5 domain-containing protein (Fragment)4.4e-2179.49Show/hide
Query:  LVFQFSHLYFL--ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK
        L    S+L F+  +RGNQR+RDRERAQARAG K+KQP+NDGLTPEQRRERDAKALQEKTA+KAA AAGGNNAGGGGKK
Subjt:  LVFQFSHLYFL--ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK

A0A6J1GQM6 putative SERF-like protein3.4e-2195.31Show/hide
Query:  ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGK
        ERGNQRDRDRERAQARAG+K+KQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGG NAGGGGK
Subjt:  ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGK

K7MG85 4F5 domain-containing protein4.4e-2179.49Show/hide
Query:  LVFQFSHLYFL--ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK
        L    S+L F+  +RGNQR+RDRERAQARAG K+KQP+NDGLTPEQRRERDAKALQEKTA+KAA AAGGNNAGGGGKK
Subjt:  LVFQFSHLYFL--ERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24100.1 Uncharacterised protein family SERF8.0e-1569.7Show/hide
Query:  LERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK
        + RG+QR+RDRERA AR G K K  ++DGLTPEQRRERDAKALQEKTA+KAA AA   ++GGGG K
Subjt:  LERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK

AT4G13615.1 Uncharacterised protein family SERF2.0e-1366.67Show/hide
Query:  LERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK
        + RG+QR+RDRERA ARAG K K   +DGLTPEQRRERD KALQEK A+KAA AAG ++ G  G K
Subjt:  LERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCATATCCTTTCATCTTTTCTTCTTGTGTTCCAGTTTTCTCATCTTTACTTTCTCGAACGCGGAAACCAGAGAGATCGAGATCGAGAAAGAGCTCAAGCTAGGGC
TGGAAACAAGTCCAAGCAACCGAGAAACGACGGCTTGACGCCGGAACAGCGACGTGAAAGGGATGCAAAAGCACTTCAGGAGAAGACAGCGAGGAAGGCCGCAATGGCTG
CCGGAGGAAACAACGCCGGCGGCGGAGGTAAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCATATCCTTTCATCTTTTCTTCTTGTGTTCCAGTTTTCTCATCTTTACTTTCTCGAACGCGGAAACCAGAGAGATCGAGATCGAGAAAGAGCTCAAGCTAGGGC
TGGAAACAAGTCCAAGCAACCGAGAAACGACGGCTTGACGCCGGAACAGCGACGTGAAAGGGATGCAAAAGCACTTCAGGAGAAGACAGCGAGGAAGGCCGCAATGGCTG
CCGGAGGAAACAACGCCGGCGGCGGAGGTAAAAAGTAA
Protein sequenceShow/hide protein sequence
MTHILSSFLLVFQFSHLYFLERGNQRDRDRERAQARAGNKSKQPRNDGLTPEQRRERDAKALQEKTARKAAMAAGGNNAGGGGKK