CuGenDBv2

Gene ID	Lag0002123
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	E3 ubiquitin-protein ligase PRT1
Genome location	chr4:39554216..39554590
RNA-Seq Expression	Lag0002123
Synteny	Lag0002123
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process) GO:0008270 - zinc ion binding (molecular function) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR000433 - Zinc finger, ZZ-type IPR043145 - Zinc finger, ZZ-type superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6592870.1 E3 ubiquitin-protein ligase PRT1, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-39

71.97

Show/hide

Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD
        MYPIIGDRYKC +CFEEVGFDLCGECYNTRSKRPGRFNQQH+PEHKF+LV P  F     ++VTE+  MLEE STTFIIANDEGSESS++     +L SD
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD

Query:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        A ES+ED+ D D  TQTNSND+RTDQN S+PT
Subjt:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT

KAG7025276.1 E3 ubiquitin-protein ligase PRT1 [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-39

71.97

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Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD
        MYPIIGDRYKC +CFEEVGFDLCGECYNTRSKRPGRFNQQH+PEHKF+LV P  F     ++VTE+  MLEE STTFIIANDEGSESS++     +L SD
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD

Query:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        A ES+ED+ D D  TQTNSND+RTDQN S+PT
Subjt:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT

XP_022960374.1 E3 ubiquitin-protein ligase PRT1 [Cucurbita moschata]

2.2e-39

71.97

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Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD
        MYPIIGDRYKC +CFEEVGFDLCGECYNTRSKRPGRFNQQH+PEHKF+LV P  F     ++VTE+  MLEE STTFIIANDEGSESS++     +L SD
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD

Query:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        A ES+ED+ D D  TQTNSND+RTDQN S+PT
Subjt:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT

XP_023005016.1 E3 ubiquitin-protein ligase PRT1 [Cucurbita maxima]

8.3e-39

71.21

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Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD
        MYPIIGDRYKC +CFEEVGFDLCGECYNTRSKRPGRFNQQH+PEHKF+LV P  F     ++VTE+  MLEE STTFIIANDEGSESS++     +L SD
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD

Query:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        A ES+E+D D D  TQTNSND+RTD+N S+PT
Subjt:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT

XP_023515020.1 E3 ubiquitin-protein ligase PRT1 [Cucurbita pepo subsp. pepo]

2.2e-39

71.97

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Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD
        MYPIIGDRYKC +CFEEVGFDLCGECYNTRSKRPGRFNQQH+PEHKF+LV P  F     ++VTE+  MLEE STTFIIANDEGSESS++     +L SD
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD

Query:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        A ES+ED+ D D  TQTNSND+RTDQN S+PT
Subjt:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C815 E3 ubiquitin-protein ligase PRT1 isoform X1

2.9e-37

67.44

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Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKFQ--LVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSDAHE
        M+P+IGDRYKC +C EEVGFDLCG+CYNTRSKRPGRFNQQH+PEH+F LV P  F+   +  + EMLEE STTFIIAN EGS+SSD      +  SDA E
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKFQ--LVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSDAHE

Query:  SDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        SDEDD D DG TQ NS+D+RTDQNYS+P+
Subjt:  SDEDDFDGDGGTQTNSNDNRTDQNYSQPT

A0A5A7SQ14 E3 ubiquitin-protein ligase PRT1 isoform X1

2.9e-37

67.44

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Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKFQ--LVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSDAHE
        M+P+IGDRYKC +C EEVGFDLCG+CYNTRSKRPGRFNQQH+PEH+F LV P  F+   +  + EMLEE STTFIIAN EGS+SSD      +  SDA E
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKFQ--LVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSDAHE

Query:  SDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        SDEDD D DG TQ NS+D+RTDQNYS+P+
Subjt:  SDEDDFDGDGGTQTNSNDNRTDQNYSQPT

A0A6J1D209 E3 ubiquitin-protein ligase PRT1 isoform X3

3.9e-26

55.73

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Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKFQLVTEMNE----MLEEVSTTFIIANDEGSESSDE---TFDLPSDA
        M PI+GDRYKC +C+E++GFDLCG+CYNT SKRPGRFNQQH+PEH F L+ P        M E    MLEE        ND+GSE+S++     D  SDA
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKFQLVTEMNE----MLEEVSTTFIIANDEGSESSDE---TFDLPSDA

Query:  HESDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        HE+DE   D D  T+ NSNDNRTDQ  S PT
Subjt:  HESDEDDFDGDGGTQTNSNDNRTDQNYSQPT

A0A6J1HAU1 E3 ubiquitin-protein ligase PRT1

1.1e-39

71.97

Show/hide

Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD
        MYPIIGDRYKC +CFEEVGFDLCGECYNTRSKRPGRFNQQH+PEHKF+LV P  F     ++VTE+  MLEE STTFIIANDEGSESS++     +L SD
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD

Query:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        A ES+ED+ D D  TQTNSND+RTDQN S+PT
Subjt:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT

A0A6J1KS10 E3 ubiquitin-protein ligase PRT1

4.0e-39

71.21

Show/hide

Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD
        MYPIIGDRYKC +CFEEVGFDLCGECYNTRSKRPGRFNQQH+PEHKF+LV P  F     ++VTE+  MLEE STTFIIANDEGSESS++     +L SD
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKF-----QLVTEMNEMLEEVSTTFIIANDEGSESSDE---TFDLPSD

Query:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT
        A ES+E+D D D  TQTNSND+RTD+N S+PT
Subjt:  AHESDEDDFDGDGGTQTNSNDNRTDQNYSQPT

SwissProt top hits

e value

%identity

Alignment

Q8LBL5 E3 ubiquitin-protein ligase PRT1

9.6e-14

41.58

Show/hide

Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLV-TPHKFQLVTEMNEMLEEVSTTFIIANDEGSESSDETFDLPSDAHESDED
        +YPIIGDRY+C +C EE+G+DLC +CY T SK PGRFNQQH P+H+  L  +P        +  +L  V +   +  DEG E        P  ++ES   
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLV-TPHKFQLVTEMNEMLEEVSTTFIIANDEGSESSDETFDLPSDAHESDED

Query:  D
        +
Subjt:  D

Arabidopsis top hits

e value

%identity

Alignment

AT3G24800.1 proteolysis 1

6.8e-15

41.58

Show/hide

Query:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLV-TPHKFQLVTEMNEMLEEVSTTFIIANDEGSESSDETFDLPSDAHESDED
        +YPIIGDRY+C +C EE+G+DLC +CY T SK PGRFNQQH P+H+  L  +P        +  +L  V +   +  DEG E        P  ++ES   
Subjt:  MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLV-TPHKFQLVTEMNEMLEEVSTTFIIANDEGSESSDETFDLPSDAHESDED

Query:  D
        +
Subjt:  D

Sequences

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CDS sequence

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ATGTATCCCATTATTGGTGATAGATACAAGTGCATGAATTGTTTTGAGGAAGTAGGTTTTGACCTCTGTGGTGAATGCTATAATACACGTTCGAAGCGTCCTGGTCGGTT
CAACCAGCAACATAAACCAGAGCACAAGTTTCGGCTTGTAACTCCTCACAAGTTTCAGCTTGTAACAGAAATGAATGAAATGTTAGAGGAAGTTTCTACAACCTTTATTA
TTGCTAATGATGAAGGTTCAGAAAGCTCAGATGAGACGTTCGATTTACCTAGCGATGCTCATGAGAGTGACGAGGACGATTTTGATGGCGACGGTGGTACTCAGACAAAC
TCCAATGACAATAGAACTGATCAAAATTACTCTCAACCTACCTAA

mRNA sequence

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Protein sequence

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MYPIIGDRYKCMNCFEEVGFDLCGECYNTRSKRPGRFNQQHKPEHKFRLVTPHKFQLVTEMNEMLEEVSTTFIIANDEGSESSDETFDLPSDAHESDEDDFDGDGGTQTN
SNDNRTDQNYSQPT

Lag0002123 (gene) of Sponge gourd (AG-4) v1 genome