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Lag0002149 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002149
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGamma-thionin family protein
Genome locationchr4:39883629..39884680
RNA-Seq ExpressionLag0002149
SyntenyLag0002149
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH10080.1 Gamma-thionin family protein [Prunus dulcis]1.1e-0650Show/hide
Query:  FVCITFLLISGPGQVSAQNGVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCCN
        F+CI  LL SGP        VCLG CS F +CN ACI +    GGAC G   E  +CCCN
Subjt:  FVCITFLLISGPGQVSAQNGVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCCN
CAB4291337.1 unnamed protein product [Prunus armeniaca]1.2e-0550Show/hide
Query:  FVCITFLLISGPGQVSAQNG--VCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCCN
        F+CI  LL S  G V A     VCLG CS F +CN ACI +    GGAC G   E  +CCCN
Subjt:  FVCITFLLISGPGQVSAQNG--VCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCCN
KAG6575964.1 hypothetical protein SDJN03_26603, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0949.35Show/hide
Query:  MGVSFANRSSFLCFVCITFLLISG----PGQVSAQNGVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCCN
        M  SFA RSSF   +C+ F+LI+G    PG       VCLG CS  PNC  ACI  G   GG C G  K+  SCCCN
Subjt:  MGVSFANRSSFLCFVCITFLLISG----PGQVSAQNGVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCCN
XP_012448045.1 PREDICTED: putative defensin-like protein 73 isoform X1 [Gossypium raimondii]9.3e-0650Show/hide
Query:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
        LC + I + L++GP  V A N   CLG CS+ PNCN++CI +GF  GG C G S E  +CCC
Subjt:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
XP_012448050.1 PREDICTED: defensin-like protein 81 isoform X2 [Gossypium raimondii]3.5e-0546.77Show/hide
Query:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
        L  +C+  +   GP  V A N   CLG CS+ PNCN++CI +GF  GG C G S E  +CCC
Subjt:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
TrEMBL top hitse value%identityAlignment
A0A0D2NB34 Uncharacterized protein4.5e-0650Show/hide
Query:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
        LC + I + L++GP  V A N   CLG CS+ PNCN++CI +GF  GG C G S E  +CCC
Subjt:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
A0A1U8P9A9 putative defensin-like protein 734.5e-0650Show/hide
Query:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
        LC + I + L++GP  V A N   CLG CS+ PNCN++CI +GF  GG C G S E  +CCC
Subjt:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
A0A4Y1S039 Gamma-thionin family protein5.3e-0750Show/hide
Query:  FVCITFLLISGPGQVSAQNGVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCCN
        F+CI  LL SGP        VCLG CS F +CN ACI +    GGAC G   E  +CCCN
Subjt:  FVCITFLLISGPGQVSAQNGVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCCN
A0A5D2K8R8 Uncharacterized protein4.5e-0650Show/hide
Query:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
        LC + I + L++GP  V A N   CLG CS+ PNCN++CI +GF  GG C G S E  +CCC
Subjt:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
A0A5J5QRZ2 Uncharacterized protein4.5e-0650Show/hide
Query:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
        LC + I + L++GP  V A N   CLG CS+ PNCN++CI +GF  GG C G S E  +CCC
Subjt:  LCFVCITFLLISGPGQVSAQN-GVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56233.1 Protein of unknown function (PD694200)1.1e-0440.62Show/hide
Query:  SSFLCFVCITFLLISGPGQVSAQNGVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
        SS + +  I   +ISG   VS     C GAC+S P CNK C  +G++  G C GS+     CCC
Subjt:  SSFLCFVCITFLLISGPGQVSAQNGVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCC
AT3G27831.1 Gamma-thionin family protein9.3e-0439.34Show/hide
Query:  ANRSSFLCFVCITFLL----ISGPGQVSAQNGVCL--GACSSFPNCNKACIIEGFEAGGAC
        +++ +FL F+C+  LL    +       AQ G  L  G CS FP+CNK C  +GF  GG C
Subjt:  ANRSSFLCFVCITFLL----ISGPGQVSAQNGVCL--GACSSFPNCNKACIIEGFEAGGAC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTCTCCTTTGCCAATCGATCTTCATTCCTTTGCTTCGTCTGTATTACTTTCCTTCTCATCTCTGGGCCAGGGCAAGTAAGTGCCCAAAATGGGGTATGTTTGGG
AGCATGCTCAAGTTTCCCAAACTGCAACAAAGCTTGCATCATTGAAGGGTTTGAGGCCGGCGGTGCGTGCACGGGCTCCTCCAAAGAGTCCACTTCTTGCTGTTGCAACT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTCTCCTTTGCCAATCGATCTTCATTCCTTTGCTTCGTCTGTATTACTTTCCTTCTCATCTCTGGGCCAGGGCAAGTAAGTGCCCAAAATGGGGTATGTTTGGG
AGCATGCTCAAGTTTCCCAAACTGCAACAAAGCTTGCATCATTGAAGGGTTTGAGGCCGGCGGTGCGTGCACGGGCTCCTCCAAAGAGTCCACTTCTTGCTGTTGCAACT
GA
Protein sequenceShow/hide protein sequence
MGVSFANRSSFLCFVCITFLLISGPGQVSAQNGVCLGACSSFPNCNKACIIEGFEAGGACTGSSKESTSCCCN