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Lag0002152 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002152
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDEAD-box ATP-dependent RNA helicase 31-like
Genome locationchr4:39906315..39906903
RNA-Seq ExpressionLag0002152
SyntenyLag0002152
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR011545 - DEAD/DEAH box helicase domain
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050997.1 DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo var. makuwa]1.1e-3985.98Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERII AVPKQRQTLLFS TVP+EVRQISH ALRRDHE VNTI       H QVRQM IVAPLEKHFSLLYAILKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        ADDVDYK
Subjt:  ADDVDYK

XP_008461517.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo]1.1e-3985.98Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERII AVPKQRQTLLFS TVP+EVRQISH ALRRDHE VNTI       H QVRQM IVAPLEKHFSLLYAILKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        ADDVDYK
Subjt:  ADDVDYK

XP_011659146.2 DEAD-box ATP-dependent RNA helicase 31 [Cucumis sativus]1.1e-3985.98Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERII AVPKQRQTLLFS TVP+EVRQISH ALRRDHE VNTI       H QVRQMQIVAPLEKHFSLLYAILKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        A+DVDYK
Subjt:  ADDVDYK

XP_022158751.1 DEAD-box ATP-dependent RNA helicase 31-like [Momordica charantia]1.9e-3985.98Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERII AVPKQRQTLLFS TVPEEVRQI H ALRRDHE VNTI       H QVRQM IVAPLEKHFSLLYAILKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        ADDVDYK
Subjt:  ADDVDYK

XP_038898727.1 DEAD-box ATP-dependent RNA helicase 31-like [Benincasa hispida]3.7e-4085.98Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERI+ AVPKQRQTLLFS TVP+EVRQISH ALRRDHE VNTI       H QVRQMQIVAPLEKHFSLLYAILKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        ADDVDYK
Subjt:  ADDVDYK

TrEMBL top hitse value%identityAlignment
A0A0A0K511 Uncharacterized protein5.3e-4085.98Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERII AVPKQRQTLLFS TVP+EVRQISH ALRRDHE VNTI       H QVRQMQIVAPLEKHFSLLYAILKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        A+DVDYK
Subjt:  ADDVDYK

A0A1S3CG75 DEAD-box ATP-dependent RNA helicase 31-like5.3e-4085.98Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERII AVPKQRQTLLFS TVP+EVRQISH ALRRDHE VNTI       H QVRQM IVAPLEKHFSLLYAILKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        ADDVDYK
Subjt:  ADDVDYK

A0A5A7U9B3 DEAD-box ATP-dependent RNA helicase 31-like5.3e-4085.98Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERII AVPKQRQTLLFS TVP+EVRQISH ALRRDHE VNTI       H QVRQM IVAPLEKHFSLLYAILKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        ADDVDYK
Subjt:  ADDVDYK

A0A6J1E1W2 DEAD-box ATP-dependent RNA helicase 31-like9.0e-4085.98Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERII AVPKQRQTLLFS TVPEEVRQI H ALRRDHE VNTI       H QVRQM IVAPLEKHFSLLYAILKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        ADDVDYK
Subjt:  ADDVDYK

A0A6J1KW12 DEAD-box ATP-dependent RNA helicase 31-like2.6e-3985.05Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFRKDIERII AVPKQRQTLLFS TVPEEVRQISH ALRRDHE VNTI       H QVRQMQIVAPL+KHFSLLYA LKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
        A DVDYK
Subjt:  ADDVDYK

SwissProt top hitse value%identityAlignment
Q0DBU5 DEAD-box ATP-dependent RNA helicase 317.8e-3363.3Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVL+LDEAD LLDMGFR DIERI+ A+PKQRQTLLFS TVP+EVRQ+ H A++RD E VNT+       H QV+QM +VAPL+K FS+LY +L +HI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYKEV
        +++VDYK +
Subjt:  ADDVDYKEV

Q5ZBH5 DEAD-box ATP-dependent RNA helicase 252.3e-3262.96Show/hide
Query:  GMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHIA
        G+KVLVLDEAD LLDMGFR+DIERII +VPK+RQTLLFS TVPEEVRQISH A++++++ +NT+       H QV QM ++APL+ HFS+LY +LK+H+A
Subjt:  GMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHIA

Query:  DDVDYKEV
        +D DYK +
Subjt:  DDVDYKEV

Q94C75 DEAD-box ATP-dependent RNA helicase 251.0e-3265.14Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFR++IERII AVPKQRQT LFS TV +EVRQI H AL+RDHE VN +       H++V QM ++A L++HFSLLY +LK+HI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYKEV
         D+V YK +
Subjt:  ADDVDYKEV

Q9FFQ1 DEAD-box ATP-dependent RNA helicase 318.4e-3570.37Show/hide
Query:  GMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTIHE-------QVRQMQIVAPLEKHFSLLYAILKEHIA
        G+KVLVLDEADHLLDMGFRKDIERII AVPK+RQT LFS TVPEEVRQI   ALRRDHE VN +HE       QVRQM ++A L++HFSLLY +L+EHI 
Subjt:  GMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTIHE-------QVRQMQIVAPLEKHFSLLYAILKEHIA

Query:  DDVDYKEV
         +VDYK +
Subjt:  DDVDYKEV

Q9FNM7 DEAD-box ATP-dependent RNA helicase 261.7e-3568.81Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFR+DIERII AVPKQRQT LFS TVPEEVRQI H AL+RDHE +N +       H++V QM ++A L++HFSLL+ +LKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYKEV
        AD+VDYK +
Subjt:  ADDVDYKEV

Arabidopsis top hitse value%identityAlignment
AT1G63250.1 DEA(D/H)-box RNA helicase family protein1.5e-2653.27Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        M +K+ ++DEAD LLD+GFR+D+E+IID +P+QRQ+LLFS T+P+EVR++S   L+RDH  ++TI       H++VRQ  IVAP E HF L+  +LKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
         +  DYK
Subjt:  ADDVDYK

AT2G07750.1 DEA(D/H)-box RNA helicase family protein1.2e-2551.4Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        M +K+ ++DEAD LLD+GF++D+E+IID +P+QRQ+LLFS T+P+EVR++S   L+RDH  ++TI       H++V+Q  IVAP E HF L+  +LKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYK
         +  DYK
Subjt:  ADDVDYK

AT5G08610.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.2e-3668.81Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFR+DIERII AVPKQRQT LFS TVPEEVRQI H AL+RDHE +N +       H++V QM ++A L++HFSLL+ +LKEHI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYKEV
        AD+VDYK +
Subjt:  ADDVDYKEV

AT5G08620.1 DEA(D/H)-box RNA helicase family protein7.3e-3465.14Show/hide
Query:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI
        MG+KVLVLDEADHLLDMGFR++IERII AVPKQRQT LFS TV +EVRQI H AL+RDHE VN +       H++V QM ++A L++HFSLLY +LK+HI
Subjt:  MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTI-------HEQVRQMQIVAPLEKHFSLLYAILKEHI

Query:  ADDVDYKEV
         D+V YK +
Subjt:  ADDVDYKEV

AT5G63630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein6.0e-3670.37Show/hide
Query:  GMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTIHE-------QVRQMQIVAPLEKHFSLLYAILKEHIA
        G+KVLVLDEADHLLDMGFRKDIERII AVPK+RQT LFS TVPEEVRQI   ALRRDHE VN +HE       QVRQM ++A L++HFSLLY +L+EHI 
Subjt:  GMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTIHE-------QVRQMQIVAPLEKHFSLLYAILKEHIA

Query:  DDVDYKEV
         +VDYK +
Subjt:  DDVDYKEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGAAGGTCCTTGTTCTTGACGAAGCTGATCATTTATTAGACATGGGATTTCGAAAGGACATCGAGAGGATTATTGATGCAGTTCCAAAGCAAAGGCAAACTCT
TTTATTTTCAACCACGGTTCCAGAAGAGGTTCGCCAAATCAGTCACAGTGCTTTGAGAAGAGATCATGAATCTGTCAATACAATTCATGAACAGGTGAGACAAATGCAAA
TAGTTGCTCCATTGGAGAAGCATTTTAGTCTACTCTATGCTATACTTAAAGAACATATTGCTGATGACGTTGACTATAAGGAAGTTCCTAGCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAATGAAGGTCCTTGTTCTTGACGAAGCTGATCATTTATTAGACATGGGATTTCGAAAGGACATCGAGAGGATTATTGATGCAGTTCCAAAGCAAAGGCAAACTCT
TTTATTTTCAACCACGGTTCCAGAAGAGGTTCGCCAAATCAGTCACAGTGCTTTGAGAAGAGATCATGAATCTGTCAATACAATTCATGAACAGGTGAGACAAATGCAAA
TAGTTGCTCCATTGGAGAAGCATTTTAGTCTACTCTATGCTATACTTAAAGAACATATTGCTGATGACGTTGACTATAAGGAAGTTCCTAGCTATTAG
Protein sequenceShow/hide protein sequence
MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTIHEQVRQMQIVAPLEKHFSLLYAILKEHIADDVDYKEVPSY