; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002160 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002160
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionS-protein homolog
Genome locationchr4:40014271..40014725
RNA-Seq ExpressionLag0002160
SyntenyLag0002160
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067970.1 uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]1.8e-3252.05Show/hide
Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------
        MYEEK +L +V+LLV  A+AVVQPC AVPLPLP W+IHVVNGL+NETLLVHCKSKDDDLG  NL  KG+EF WT                          
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------

Query:  ------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK
                    RC+  +C WIAK+D VYLRNN    DE +H WNK
Subjt:  ------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK

KAE8646232.1 hypothetical protein Csa_016625, partial [Cucumis sativus]5.7e-2652.63Show/hide
Query:  HLAMV-LLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL------------------------------
        HLA+V LL+V  A+ VVQPCMAVP+P P W IHVVNGL NETLLVHCKS DDDLG Q+L V+G EF+WT                               
Subjt:  HLAMV-LLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL------------------------------

Query:  ------RCYDKNCFWIAKEDGVYLRNNQAKTDE
              RCYDKNC WIAK+DG+YLRNN    DE
Subjt:  ------RCYDKNCFWIAKEDGVYLRNNQAKTDE

XP_004139722.1 S-protein homolog 1-like [Cucumis sativus]1.9e-2953.57Show/hide
Query:  HLAMV-LLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL------------------------------
        HLA+V LL+V  A+ VVQPCMAVP+P P W IHVVNGL NETLLVHCKS DDDLG Q+L V+G EF+WT                               
Subjt:  HLAMV-LLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL------------------------------

Query:  ------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK
              RCYDKNC WIAK+DG+YLRNN    DE VH WNK
Subjt:  ------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK

XP_008461539.1 PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]1.5e-3151.37Show/hide
Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------
        MYE+   LAM LLLV  A+ +VQP  AVPLPLP W IHVVNGL N+TL VHCKSKDDDLGN  L+ KG E  WT                          
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------

Query:  ------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK
                    RC+DKNC WIAK+DG+YLRNN    DELVH WNK
Subjt:  ------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK

XP_008462114.1 PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]5.0e-3053.24Show/hide
Query:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------------
        HLA+V LLV  A+ VVQPC AVP+P P W IHVVNGL NETLLVHCKS+DDDLG Q+L VKG EF+WT                                
Subjt:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------------

Query:  -----RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK
             RCYDKNC WIAK+DG+YLRNN    +E VH WNK
Subjt:  -----RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog7.5e-3251.37Show/hide
Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------
        MYE+   LAM LLLV  A+ +VQP  AVPLPLP W IHVVNGL N+TL VHCKSKDDDLGN  L+ KG E  WT                          
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------

Query:  ------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK
                    RC+DKNC WIAK+DG+YLRNN    DELVH WNK
Subjt:  ------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK

A0A1S3CG89 S-protein homolog2.4e-3053.24Show/hide
Query:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------------
        HLA+V LLV  A+ VVQPC AVP+P P W IHVVNGL NETLLVHCKS+DDDLG Q+L VKG EF+WT                                
Subjt:  HLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------------

Query:  -----RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK
             RCYDKNC WIAK+DG+YLRNN    +E VH WNK
Subjt:  -----RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK

A0A5A7VL75 S-protein homolog8.8e-3352.05Show/hide
Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------
        MYEEK +L +V+LLV  A+AVVQPC AVPLPLP W+IHVVNGL+NETLLVHCKSKDDDLG  NL  KG+EF WT                          
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------------

Query:  ------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK
                    RC+  +C WIAK+D VYLRNN    DE +H WNK
Subjt:  ------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNK

A0A6J1CPC6 S-protein homolog5.4e-2241.72Show/hide
Query:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLP---LPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL----------------------
        MY + + + +V+ LVS   AV+Q   A  L    LP W IHVVNGL   TL VHCKSKDDDLG  NL  +GDEF WT                       
Subjt:  MYEEKKHLAMVLLLVSAALAVVQPCMAVPLP---LPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL----------------------

Query:  ---------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNKST
                       RC DKNC W AK+DG+YLRNN    DE +H W   T
Subjt:  ---------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNKST

A0A6J1H9E9 S-protein homolog4.3e-1940.67Show/hide
Query:  MGAMYEEKKHL-AMVLLLVSAALAVVQP-CMAVPL-PLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------
        M + YE+K+HL A   LL   A A+ QP  MA+ + P+  W++HVVN L+N TL VHCKSKDDDLG  NL   G EF W+                    
Subjt:  MGAMYEEKKHL-AMVLLLVSAALAVVQP-CMAVPL-PLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL-------------------

Query:  ------------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVW
                          RC+  NC W A++DGVYLRNN    DE VH W
Subjt:  ------------------RCYDKNCFWIAKEDGVYLRNNQAKTDELVHVW

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 11.2e-1036.45Show/hide
Query:  WQIHVVNGL-DNETLLVHCKSKDDDLGNQNLAVKG------------DEFYWTL---------------------RCYDKNCFWIAKEDGVYLRNNQAKT
        WQ+ VVNGL   ETL +HCKSK+DDLG  NL  +               F+W                       RC  KNC W AK DG+YL N+ +  
Subjt:  WQIHVVNGL-DNETLLVHCKSKDDDLGNQNLAVKG------------DEFYWTL---------------------RCYDKNCFWIAKEDGVYLRNNQAKT

Query:  DELVHVW
        D L   W
Subjt:  DELVHVW

Q2HQ46 S-protein homolog 743.9e-0935.19Show/hide
Query:  WQIHVVNGL-DNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL----------------------------------RCYDKNCFWIAKEDGVYLRNNQAK
        WQ+ V NGL   ETL +HCKSK++DLG+ NL    D F W                                    RC  KNC W AK DG+YL N+   
Subjt:  WQIHVVNGL-DNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL----------------------------------RCYDKNCFWIAKEDGVYLRNNQAK

Query:  TDELVHVW
         D L   W
Subjt:  TDELVHVW

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family1.3e-0424.52Show/hide
Query:  KKHLAMVLLLVSAALAVVQPCMAVPLPLPT-------------WQIHVVNGLDNE-TLLVHCKSKDDDLGNQNLAVK-------GDEFY----------W
        K++L++ +L++     + Q      +P+P                + + N L N+ TLL HCKSKDDDLGN+ L          G +F+          W
Subjt:  KKHLAMVLLLVSAALAVVQPCMAVPLPLPT-------------WQIHVVNGLDNE-TLLVHCKSKDDDLGNQNLAVK-------GDEFY----------W

Query:  ------------------TLRCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNKS
                            +C    C W  + +G    N++ K  +L + WNKS
Subjt:  ------------------TLRCYDKNCFWIAKEDGVYLRNNQAKTDELVHVWNKS

AT4G16295.1 S-protein homologue 18.5e-1236.45Show/hide
Query:  WQIHVVNGL-DNETLLVHCKSKDDDLGNQNLAVKG------------DEFYWTL---------------------RCYDKNCFWIAKEDGVYLRNNQAKT
        WQ+ VVNGL   ETL +HCKSK+DDLG  NL  +               F+W                       RC  KNC W AK DG+YL N+ +  
Subjt:  WQIHVVNGL-DNETLLVHCKSKDDDLGNQNLAVKG------------DEFYWTL---------------------RCYDKNCFWIAKEDGVYLRNNQAKT

Query:  DELVHVW
        D L   W
Subjt:  DELVHVW

AT4G29035.1 Plant self-incompatibility protein S1 family2.7e-1035.19Show/hide
Query:  WQIHVVNGL-DNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL----------------------------------RCYDKNCFWIAKEDGVYLRNNQAK
        WQ+ V NGL   ETL +HCKSK++DLG+ NL    D F W                                    RC  KNC W AK DG+YL N+   
Subjt:  WQIHVVNGL-DNETLLVHCKSKDDDLGNQNLAVKGDEFYWTL----------------------------------RCYDKNCFWIAKEDGVYLRNNQAK

Query:  TDELVHVW
         D L   W
Subjt:  TDELVHVW

AT5G04047.1 Plant self-incompatibility protein S1 family8.5e-0448.28Show/hide
Query:  CFWIAKEDGVYLRNNQAKTDELVHVWNKS
        CFW A+EDG+Y+RNN   T +L++ W+ +
Subjt:  CFWIAKEDGVYLRNNQAKTDELVHVWNKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCAATGTATGAAGAAAAGAAGCACTTGGCAATGGTTCTCTTACTTGTCTCGGCGGCTCTGGCGGTGGTTCAGCCGTGCATGGCCGTTCCACTGCCACTCCCAAC
CTGGCAAATTCATGTGGTCAATGGGCTCGACAACGAAACCCTATTGGTGCATTGCAAGTCCAAGGACGATGATTTGGGCAACCAGAATTTGGCTGTCAAAGGAGATGAAT
TCTATTGGACTTTAAGGTGCTACGACAAAAATTGCTTTTGGATTGCTAAAGAGGATGGAGTTTACTTGAGGAACAATCAAGCTAAAACTGATGAACTTGTACATGTGTGG
AACAAAAGTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCAATGTATGAAGAAAAGAAGCACTTGGCAATGGTTCTCTTACTTGTCTCGGCGGCTCTGGCGGTGGTTCAGCCGTGCATGGCCGTTCCACTGCCACTCCCAAC
CTGGCAAATTCATGTGGTCAATGGGCTCGACAACGAAACCCTATTGGTGCATTGCAAGTCCAAGGACGATGATTTGGGCAACCAGAATTTGGCTGTCAAAGGAGATGAAT
TCTATTGGACTTTAAGGTGCTACGACAAAAATTGCTTTTGGATTGCTAAAGAGGATGGAGTTTACTTGAGGAACAATCAAGCTAAAACTGATGAACTTGTACATGTGTGG
AACAAAAGTACTTGA
Protein sequenceShow/hide protein sequence
MGAMYEEKKHLAMVLLLVSAALAVVQPCMAVPLPLPTWQIHVVNGLDNETLLVHCKSKDDDLGNQNLAVKGDEFYWTLRCYDKNCFWIAKEDGVYLRNNQAKTDELVHVW
NKST