CuGenDBv2

Gene ID	Lag0002178
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	pre-rRNA-processing protein TSR1 homolog
Genome location	chr4:40252141..40257338
RNA-Seq Expression	Lag0002178
Synteny	Lag0002178
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0000479 - endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component) GO:0030688 - preribosome, small subunit precursor (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0034511 - U3 snoRNA binding (molecular function)
InterPro domains	IPR012948 - AARP2CN IPR039761 - Ribosome biogenesis protein Bms1/Tsr1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6592850.1 Pre-rRNA-processing protein TSR1-like protein, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-184

83.69

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G  RAQVNKPHKSRFSSKATRQQHKTS KDR+K     + +             R +K       ++ SSGSK+ PRVIVLFGLS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        LAPG+SSSTVASSEYKLRATVLK P   +  C     VADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPSTAV IRDLPTD+KKRNDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS+TSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCT  KCTLLLTGYLRARSLSVNQLVHVAGAGDFQL +IEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR+EQDAMDTHDVEVV+LLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALA GTS+YQEAWEIG+TDDEDSDVDNESDG
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNP
        MMLDSGYTN VDDLNNP
Subjt:  MMLDSGYTNGVDDLNNP

XP_022960248.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita moschata]

1.7e-184

83.93

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G  RAQVNKPHKSRFSSKATRQQHKTSLKDRSK  +  + +             R +K       ++ SSGSK+ PRVIVLFGLS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        LA G+SSSTVASSEYKLRATVLK P   +  C     VADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPSTAV IRDLPTD+KKRNDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS+TSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCT  KCTLLLTGYLRARSLSVNQLVHVAGAGDFQL +IEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR EQDAMDTHDVEVV+LLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALA GTS+YQEAWEIG+TDDEDSDVDNESDG
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNP
        MMLDSGYTN VDDLNNP
Subjt:  MMLDSGYTNGVDDLNNP

XP_023004943.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita maxima]

1.3e-184

83.69

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G  R QVNKPHKSRFSSKATRQQHKTSLKDRSK     + +             R +K       ++ SSGSK+ PRVIVLFGLS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        LAPG+SSSTVASSEYKLRATVLK P   +  C     VADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPSTAV IRDLPTD+KKRNDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS+TSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCT  KCTLLLTGYLRARSLSVNQLVHVAGAGDFQL +IEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR+EQDAMDTHDVEVV+LLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQ+EKHLRKRALA GTS+YQEAWEIG+TDDEDSDVDNESDG
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNP
        MMLDSGYTN VDDLNNP
Subjt:  MMLDSGYTNGVDDLNNP

XP_023513549.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo]

2.6e-185

83.93

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G  RAQVNKPHKSRFSSKATRQQHKTS KDRSK     + +             R +K       ++ SSGSK+ PRVIVLFGLS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        LAPG+SSSTVASSEYKLRATVLK P   +  C     VADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPSTAV IRDLPTD+KKRNDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS+TSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCT  KCTLLLTGYLRARSLSVNQLVHVAGAGDFQL KIEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR+EQDAMDTHDVEV++LLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALA GTS+YQEAWEIG+TDDEDSDVDNESDG
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNP
        MMLDSGYTN VDDLNNP
Subjt:  MMLDSGYTNGVDDLNNP

XP_038875506.1 pre-rRNA-processing protein TSR1 homolog [Benincasa hispida]

2.9e-184

83.97

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEKGCCFTGQKTS-SGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G +RAQVNKPHKSRFSSKATRQQHKTSLKDRSK     + +             R +K       K + SGSKS PRVIVLFGLS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEKGCCFTGQKTS-SGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        L PG SSSTVASSEYKLRATVLK P   +  C     VADLIAFV SASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTD+KKRNDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS+TSEFPEDCK+YPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCT  KCTLLLTGYLRARSLSVNQLVHVAGAGDFQL KIEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR+EQDAMDT D EVVRLLEPSEQEPLVVEN+PDPLSGEQTWPTEADRAEAD+NQKEKHLRKRALA GTS+YQEAWEIGETDDEDSDVDNE+DG
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNPG
        MMLDSGYTN VDDLNNPG
Subjt:  MMLDSGYTNGVDDLNNPG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDA2 Uncharacterized protein

2.2e-177

80.86

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G +RAQVNKPHKSRFSSKATRQQHKTSLKD+SK     + +             R +K       ++T SGSKS PRVIVLF LS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        LAPG SSSTVASSEYKLRATVLK P   +  C     VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTD+KK+NDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS+ SEFPEDCKFY ADTKDELHKFMWLFKEQRLTVPHWR QRPYLMSQKVDMVADNCTP KCTLLLTGYLRARSLSVNQLVHVAGAGDFQL KIEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR EQDAMDT D E++RLLEPSE EPLVVEN+PDPLSGEQTWPTEADRAEA+RNQKEKHLRKRALA GTS+YQEAW+IGE++DEDSDVDNE+D 
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNPG
        MMLDS YTN V++LNN G
Subjt:  MMLDSGYTNGVDDLNNPG

A0A1S3CBG5 pre-rRNA-processing protein TSR1 homolog

6.8e-179

81.34

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEKGCCFTGQKTS-SGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G +RAQVNKPHKSRFS+KATRQQHKTSLKDRSK     + +             R +K       K + SGSKS PRVIVLF LS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEKGCCFTGQKTS-SGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        LAPG SSSTVASSEYKLRATVLK P   +  C     VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTD+KK+NDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS++SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWR QRPYLMSQKVDMVADNCTP +CTLLLTGYLRARSLSVNQLVHVAGAGDFQL KIEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR EQDAMDT D E++RLLEPSE EPLVVEN+PDPLSGEQTWPTEADRAEADRNQKEKHLRKRALA GTS+YQEAWEIG+++DEDSDVDNE+D 
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNPG
        MMLDS YTN V+DLNN G
Subjt:  MMLDSGYTNGVDDLNNPG

A0A5A7T9F0 Pre-rRNA-processing protein TSR1-like protein

1.1e-179

81.58

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEKGCCFTGQKTS-SGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G +RAQVNKPHKSRFS+KATRQQHKTSLKDRSK     + +             R +K       K + SGSKS PRVIVLF LS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEKGCCFTGQKTS-SGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        LAPG SSSTVASSEYKLRATVLK P   +  C     VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTD+KK+NDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS++SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWR QRPYLMSQKVDMVADNCTP +CTLLLTGYLRARSLSVNQLVHVAGAGDFQL KIEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR EQDAMDT D E++RLLEPSE EPLVVEN+PDPLSGEQTWPTEADRAEADRNQKEKHLRKRALA GTS+YQEAWEIG+++DEDSDVDNE+DG
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNPG
        MMLDS YTN V+DLNN G
Subjt:  MMLDSGYTNGVDDLNNPG

A0A6J1H8A7 pre-rRNA-processing protein TSR1 homolog

8.3e-185

83.93

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G  RAQVNKPHKSRFSSKATRQQHKTSLKDRSK  +  + +             R +K       ++ SSGSK+ PRVIVLFGLS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        LA G+SSSTVASSEYKLRATVLK P   +  C     VADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPSTAV IRDLPTD+KKRNDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS+TSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCT  KCTLLLTGYLRARSLSVNQLVHVAGAGDFQL +IEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR EQDAMDTHDVEVV+LLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALA GTS+YQEAWEIG+TDDEDSDVDNESDG
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNP
        MMLDSGYTN VDDLNNP
Subjt:  MMLDSGYTNGVDDLNNP

A0A6J1L0W3 pre-rRNA-processing protein TSR1 homolog

6.4e-185

83.69

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL
        G  R QVNKPHKSRFSSKATRQQHKTSLKDRSK     + +             R +K       ++ SSGSK+ PRVIVLFGLS+SVDLNPLAEDLLSL
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEK-GCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSL

Query:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC
        LAPG+SSSTVASSEYKLRATVLK P   +  C     VADLIAFV SASYYIEGSTSLYIDSFGSECLS+LRSLGLPSTAV IRDLPTD+KKRNDYKKMC
Subjt:  LAPGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMC

Query:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK
        ISS+TSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCT  KCTLLLTGYLRARSLSVNQLVHVAGAGDFQL +IEVLK
Subjt:  ISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLK

Query:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG
        DPVPLNPR+EQDAMDTHDVEVV+LLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQ+EKHLRKRALA GTS+YQEAWEIG+TDDEDSDVDNESDG
Subjt:  DPVPLNPRIEQDAMDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDG

Query:  MMLDSGYTNGVDDLNNP
        MMLDSGYTN VDDLNNP
Subjt:  MMLDSGYTNGVDDLNNP

SwissProt top hits

e value

%identity

Alignment

Q2NL82 Pre-rRNA-processing protein TSR1 homolog

3.8e-25

29.26

Show/hide

Query:  RAEKGCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSLLAPGT--SSSTVASSEYKLRATVLKHPMVICN------HVADLIAFVASASYYIE
        + +K      ++   G    P  +++  L S + L P A  LL     GT   +    +  + L    LKH     +      HV   +A VA    ++ 
Subjt:  RAEKGCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSLLAPGT--SSSTVASSEYKLRATVLKHPMVICN------HVADLIAFVASASYYIE

Query:  GSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLP-TDMKKRNDYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKV
             + DS G  CLS L + GLP+  + ++ +    +KK+ D +K    ++   FP D K    DT+ E    +     Q+     +R++R YL +  V
Subjt:  GSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLP-TDMKKRNDYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKV

Query:  DMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLKDPVPLNPR--------------IEQDAMDTHD--VEVVRLLEPSEQEPLVVE
        D V         TL ++GY+R ++L+VN+L+H+ G GDFQ+ +I+   DP PLNPR                 DA+D  +  ++V+   +P  QE L  E
Subjt:  DMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLKDPVPLNPR--------------IEQDAMDTHD--VEVVRLLEPSEQEPLVVE

Query:  NDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI-------GETDDEDSDVDNESDGMMLDS
          PDP+ GEQTWPTE + +EA    KE     + +  GTS YQ  W +       GE D+ + D     D M  +S
Subjt:  NDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI-------GETDDEDSDVDNESDGMMLDS

Q54YA7 Pre-rRNA-processing protein TSR1 homolog

7.3e-21

Show/hide

Query:  SPRVIVLFGLSSSVDLNPLAEDLLSLLAPGTSSS--------------------TVASSEYKLRATVLKHPMVICNHV------ADLIAFVASASYYIEG
        +PRV+ +  LS S +   + E LL       ++                     T  S   K+R  +L+   +  + V      +D+I FV  A+     
Subjt:  SPRVIVLFGLSSSVDLNPLAEDLLSLLAPGTSSS--------------------TVASSEYKLRATVLKHPMVICNHV------ADLIAFVASASYYIEG

Query:  STSLYIDSFGSECLSVLRSLGLPSTAVLIRDL-PTDMKKRNDYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVD
             ++S      +++++  +P+   +I++L  T +KKRN+ KK   S     FP + K  P DT DE  + +   +   +    WR  RPY++ +K  
Subjt:  STSLYIDSFGSECLSVLRSLGLPSTAVLIRDL-PTDMKKRNDYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVD

Query:  MVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLKDPVPLNP-------------------RIEQDAMDTHDVEVVRLLEPSEQEPLV
         +     PE   + + G++R  +LS  Q++H+   GDFQ+ KIE++ DP                         +EQD      + ++  ++  +++ L 
Subjt:  MVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLKDPVPLNP-------------------RIEQDAMDTHDVEVVRLLEPSEQEPLV

Query:  VENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI-GETDDEDSDVDNE
          N PDP+  EQ  PT  +  E + N+K+K + K     GTS YQ +W +  E+D+E+ + +NE
Subjt:  VENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI-GETDDEDSDVDNE

Q5R434 Pre-rRNA-processing protein TSR1 homolog

3.4e-26

29.79

Show/hide

Query:  RAEKGCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSLLAPGT--SSSTVASSEYKLRATVLKHPMVICN------HVADLIAFVASASYYIE
        + +K      ++   G    P  +++  L S + L P A  LL     GT   +    +  + L    LKH     +      H+   +A VA    ++ 
Subjt:  RAEKGCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSLLAPGT--SSSTVASSEYKLRATVLKHPMVICN------HVADLIAFVASASYYIE

Query:  GSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLP-TDMKKRNDYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKV
             + DS G  CLS L + GLP+  + ++ +    +KK+ D +K    ++   FP D K    DT+ E    +     Q+     +R++R YL ++ V
Subjt:  GSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLP-TDMKKRNDYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKV

Query:  DMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLKDPVPLNPR-----------IEQDAMDTHD-----VEVVRLLEPSEQEPLVVE
        D VA        TL ++GY+R ++L+VN+L+H+ G GDFQ+ +I+   DP PLNPR           +E  A DT D     ++V+   +P  QE L  E
Subjt:  DMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLKDPVPLNPR-----------IEQDAMDTHD-----VEVVRLLEPSEQEPLVVE

Query:  NDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI-------GETDDEDSDVDNESDGMMLDS
          PDP+ GEQTWPTE + +EA    KE     + +  GTS YQ  W +       GE D+ + D     D M  +S
Subjt:  NDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI-------GETDDEDSDVDNESDGMMLDS

Q5SWD9 Pre-rRNA-processing protein TSR1 homolog

1.4e-27

30.12

Show/hide

Query:  QVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLL-VFSAVNDSRAEKGCCFTGQKTSSGSKSS-PRVIVLFGLSSSVDLNPLAEDLLSLLAPG
        Q NK HK          Q  +  +   K     L R+L  +      +  R +K      +K   GSK   P  +++  L S + L P A  LL     G
Subjt:  QVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLL-VFSAVNDSRAEKGCCFTGQKTSSGSKSS-PRVIVLFGLSSSVDLNPLAEDLLSLLAPG

Query:  T--SSSTVASSEYKLRATVLK-------------HPMVICNHVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLP-TDMKKRN
        T   S   ++  + L    LK             H ++    VAD I F+      +EG      DS G  CLS L + GLP+  + ++ L     KK+ 
Subjt:  T--SSSTVASSEYKLRATVLK-------------HPMVICNHVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLP-TDMKKRN

Query:  DYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLH
        D +K     +   FPED K    DT+ E    +     Q+     +R++R YL +   D V    +    TL ++GY+R R+L+VN L+H+ G GDFQ++
Subjt:  DYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLH

Query:  KIEVLKDPVPLNPRIEQD------AMDT----------HDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDY
        +I+   DP PLNPR+ +       AM+            D++V+   +P  QE L  E  PDP+ GEQTWPTE +  EAD   K++    + +  GTS Y
Subjt:  KIEVLKDPVPLNPRIEQD------AMDT----------HDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDY

Query:  QEAWEIGETDDEDSD
        Q  W + E D+ D +
Subjt:  QEAWEIGETDDEDSD

Q5XGY1 Pre-rRNA-processing protein TSR1 homolog

2.1e-28

28.25

Show/hide

Query:  QVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLL-VFSAVNDSRAEKGCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSLLAPGT
        Q NKPHKS        Q  +   +  +K       ++L  L      N  R ++      +K S G+K  P  +V   ++ S+    + +DL SL+    
Subjt:  QVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLL-VFSAVNDSRAEKGCCFTGQKTSSGSKSSPRVIVLFGLSSSVDLNPLAEDLLSLLAPGT

Query:  SSSTVASSEYK--LRATVLKHPMVICNHVADLIAFVASASYYIEGSTSLYI-------DSFGSECLSVLRSLGLPSTAVLIRDLP-TDMKKRNDYKKMCI
              + + K  L     K     C   A+     +         T L++       DS+G  CLS L + GLPS  + ++ +    +KKR D KK   
Subjt:  SSSTVASSEYK--LRATVLKHPMVICNHVADLIAFVASASYYIEGSTSLYI-------DSFGSECLSVLRSLGLPSTAVLIRDLP-TDMKKRNDYKKMCI

Query:  SSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLKD
          + + F  D K +  DT+ E    +     Q+     +R++R Y+++Q+ D    + +    TL L+GY+R + L+VN+LVH+ G GDF + +I+   D
Subjt:  SSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLKD

Query:  PVPLNPRIEQDAMDT-----------------HDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI
        P PLNPR+ +    +                  D++V+   +PS QE L  E  PDP+ GEQTWPTE +  EA+   K      + +  GTS YQ AW +
Subjt:  PVPLNPRIEQDAMDT-----------------HDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI

Query:  G------ETDDEDSDVDNESDGM-MLDSGYTNGVDDLNN
               E  D+D D D E D    +D  Y+   D   N
Subjt:  G------ETDDEDSDVDNESDGM-MLDSGYTNGVDDLNN

Arabidopsis top hits

e value

%identity

Alignment

AT1G42440.1 FUNCTIONS IN: molecular_function unknown

1.8e-123

57.7

Show/hide

Query:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEKGCCFTGQK---------TSSGSKSSPRVIVLFGLSSSVDLNP
        GR R QVNK HK+RFSSK++R  H+T+L+D  +      + +           +R ++G     QK          S G  S+PRVIVLF LS+SV+LN 
Subjt:  GRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEKGCCFTGQK---------TSSGSKSSPRVIVLFGLSSSVDLNP

Query:  LAEDLLSLLA---PGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTD
        L ED+L LL+    G +SSTVASSEYKLRATVLK P   ++ C     VADL+AFVASAS   E ++S +IDSFGS+CLSV RS+GLPST VLIRDLP+D
Subjt:  LAEDLLSLLA---PGTSSSTVASSEYKLRATVLKHP---MVICNH---VADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTD

Query:  MKKRNDYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAG
        +KK+N+ KKMC S L SEFPEDCKFYPADT+DELHKFMWLFK QRLTVPHWR+QR Y++++K  M+ D+ +  KCTLLL+GYLRAR LSVNQLVHV+G G
Subjt:  MKKRNDYKKMCISSLTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAG

Query:  DFQLHKIEVLKDPVPLNPRIEQDAM---DTHDVEVVRLL--EPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI
        DFQ  KIEVLKDP PLN R  Q++M   D+HD EV++ L  +P +QEPLV+EN PDPL+GEQTWPTE + AEAD+NQK+  L+K+ L  GTS+YQ AW +
Subjt:  DFQLHKIEVLKDPVPLNPRIEQDAM---DTHDVEVVRLL--EPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEI

Query:  GETDDEDSD-VDNESDGMMLDSGYTNGVDDLNNPG
         ETD+EDSD  D++ +GM+LD G     +D N  G
Subjt:  GETDDEDSD-VDNESDGMMLDSGYTNGVDDLNNPG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTCCGTGTTTAGTTTCCACACATTTGCCGGCGGAGGAACCCATCTTCCATGACTCGCGAGGGAAAACAAAACCTAACTCTGCTCAACGCCTTGTTCTTCTTCTTCA
CGCCGTCCCCTCCGCAGCTCAGTGTCGCCTACGCCGCTCTCCCGTCCACTGCGGACGCCGCCGTCGTCTTTATTCCGCTCGTGCCGCCGCCACCGTCGTCTTTATTCCGT
TCGTGCCGCCGCCACCGTCGTCTTTATTCCATTCGTGCCGCCGCAGCCGTTCTAGCGGTTTTGCCCTGATTGTCTACTTCCTTGTTCTTACTGACTGTAGTTGGTTTTGG
TGTGTTTTTAGATTAAAACTATGGCACGACGGGCGTTTTGTGAAATCTGAAGTTCACTATTTCAGTTTCCATGGGAGGGATAGGGCTCAAGTGAATAAGCCCCATAAATC
ACGCTTCTCATCCAAGGCAACGCGACAACAGCACAAAACATCTTTAAAAGATAGAAGCAAATTTCGAAGTATAATGCTGCTAAGGGAGCTCGGGCTGCTCGTCTTCAGCG
CAGTAAATGATTCGAGAGCAGAAAAGGGCTGCTGTTTTACAGGACAAAAGACATCAAGTGGATCAAAGAGTTCTCCCAGAGTCATAGTTCTTTTTGGGCTTTCCTCCTCA
GTAGACCTGAATCCACTTGCTGAGGATCTTTTGTCTCTATTAGCTCCTGGAACTTCGTCATCCACAGTTGCTTCTTCAGAGTACAAGCTACGGGCAACAGTACTAAAGCA
CCCTATGGTGATTTGCAATCATGTAGCCGACCTAATTGCTTTCGTGGCCTCCGCGAGCTATTATATTGAAGGAAGCACATCTCTCTACATTGATTCATTTGGAAGCGAAT
GCCTTTCTGTTTTAAGATCTCTGGGCTTACCGAGTACTGCAGTGCTTATTCGAGACCTACCCACTGATATGAAGAAAAGAAACGATTATAAAAAAATGTGTATTTCTAGC
CTTACTTCGGAATTTCCCGAAGATTGCAAGTTTTATCCTGCAGATACTAAAGATGAGTTACACAAGTTTATGTGGCTTTTTAAGGAGCAAAGGCTAACTGTTCCTCATTG
GAGAAATCAAAGGCCTTATTTGATGTCTCAGAAGGTCGATATGGTAGCTGATAATTGTACTCCAGAAAAGTGTACCCTTCTTCTCACTGGTTATCTACGTGCTCGAAGTC
TCTCTGTGAATCAGCTGGTTCATGTTGCTGGAGCAGGAGATTTCCAGCTTCACAAAATCGAAGTTCTCAAGGATCCAGTTCCATTGAATCCAAGAATAGAACAAGATGCC
ATGGATACTCACGACGTGGAGGTTGTTCGCTTGTTGGAGCCATCAGAACAAGAGCCATTGGTTGTTGAGAACGATCCTGATCCTCTGTCTGGTGAACAGACTTGGCCAAC
TGAGGCAGACAGAGCTGAGGCAGATAGAAATCAGAAAGAAAAGCATTTGAGGAAAAGAGCACTTGCTGATGGCACTTCTGACTATCAGGAAGCTTGGGAAATAGGTGAGA
CAGATGATGAGGATTCTGACGTTGACAATGAATCTGATGGTATGATGTTAGACAGTGGTTATACAAATGGAGTGGATGACCTTAATAATCCTGGCTCAGTGATGATGATC
AAGCTTCTTTTGAGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRPCLVSTHLPAEEPIFHDSRGKTKPNSAQRLVLLLHAVPSAAQCRLRRSPVHCGRRRRLYSARAAATVVFIPFVPPPPSSLFHSCRRSRSSGFALIVYFLVLTDCSWFW
CVFRLKLWHDGRFVKSEVHYFSFHGRDRAQVNKPHKSRFSSKATRQQHKTSLKDRSKFRSIMLLRELGLLVFSAVNDSRAEKGCCFTGQKTSSGSKSSPRVIVLFGLSSS
VDLNPLAEDLLSLLAPGTSSSTVASSEYKLRATVLKHPMVICNHVADLIAFVASASYYIEGSTSLYIDSFGSECLSVLRSLGLPSTAVLIRDLPTDMKKRNDYKKMCISS
LTSEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPEKCTLLLTGYLRARSLSVNQLVHVAGAGDFQLHKIEVLKDPVPLNPRIEQDA
MDTHDVEVVRLLEPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALADGTSDYQEAWEIGETDDEDSDVDNESDGMMLDSGYTNGVDDLNNPGSVMMI
KLLLS

Lag0002178 (gene) of Sponge gourd (AG-4) v1 genome