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Lag0002188 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002188
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionVacuolar sorting-associated protein 62
Genome locationchr4:40362563..40364958
RNA-Seq ExpressionLag0002188
SyntenyLag0002188
Gene Ontology termsNA
InterPro domainsIPR014807 - Cytochrome c oxidase assembly factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014597.1 hypothetical protein SDJN02_24776 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-5484.73Show/hide
Query:  MAKRLVSIFKRSSIPHA---ASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLA
        +AKRL+SIFKRS  P+A   A SSS++P+ EGVNKSWGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLA
Subjt:  MAKRLVSIFKRSSIPHA---ASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLA

Query:  VAHKRHSLSCTFPVTGPQGTGILQLKAVRNG
        VAHKRHSLSCTFPV+GPQGTGI+QLKAVRNG
Subjt:  VAHKRHSLSCTFPVTGPQGTGILQLKAVRNG

XP_004140577.1 uncharacterized protein LOC101206927 [Cucumis sativus]1.7e-5589.06Show/hide
Query:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH
        +AKR  SIFKRSS PH ASS+S+KP    VNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEK RNNQAVIDAIGEPI+KGPWYNASLAVAH
Subjt:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH

Query:  KRHSLSCTFPVTGPQGTGILQLKAVRNG
        KRHSLSCTFPV+GPQGTGILQLKAVRNG
Subjt:  KRHSLSCTFPVTGPQGTGILQLKAVRNG

XP_022991411.1 uncharacterized protein LOC111488050 isoform X1 [Cucurbita maxima]2.5e-5485.94Show/hide
Query:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH
        +AKR +SIFKRS  P+ ASSSS++P+ EGVNKSWGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH

Query:  KRHSLSCTFPVTGPQGTGILQLKAVRNG
        KRHSLSCTFPV+GPQGTGI+QLKAVRNG
Subjt:  KRHSLSCTFPVTGPQGTGILQLKAVRNG

XP_038876218.1 uncharacterized protein LOC120068500 isoform X1 [Benincasa hispida]1.1e-5792.19Show/hide
Query:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH
        +AKR VSIFKRS IPH ASSSS+KP+ +GVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPI KGPWYNASLAVAH
Subjt:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH

Query:  KRHSLSCTFPVTGPQGTGILQLKAVRNG
        KRHSLSCTFPV+GPQGTGILQLKAVRNG
Subjt:  KRHSLSCTFPVTGPQGTGILQLKAVRNG

XP_038876219.1 uncharacterized protein LOC120068500 isoform X2 [Benincasa hispida]4.1e-5791.41Show/hide
Query:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH
        +AKR VSIFKRS IPHA  SSS+KP+ +GVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPI KGPWYNASLAVAH
Subjt:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH

Query:  KRHSLSCTFPVTGPQGTGILQLKAVRNG
        KRHSLSCTFPV+GPQGTGILQLKAVRNG
Subjt:  KRHSLSCTFPVTGPQGTGILQLKAVRNG

TrEMBL top hitse value%identityAlignment
A0A0A0KF26 Uncharacterized protein8.4e-5689.06Show/hide
Query:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH
        +AKR  SIFKRSS PH ASS+S+KP    VNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEK RNNQAVIDAIGEPI+KGPWYNASLAVAH
Subjt:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH

Query:  KRHSLSCTFPVTGPQGTGILQLKAVRNG
        KRHSLSCTFPV+GPQGTGILQLKAVRNG
Subjt:  KRHSLSCTFPVTGPQGTGILQLKAVRNG

A0A5D3DMW4 Vacuolar sorting-associated protein 626.0e-5487.5Show/hide
Query:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH
        +AKR  SIFKRSS P+ ASS+S+KP+   VNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAV DAIGEPI KGPWYNASLAVAH
Subjt:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH

Query:  KRHSLSCTFPVTGPQGTGILQLKAVRNG
        KRHSLSCTFPV+GPQG GILQLKAVRNG
Subjt:  KRHSLSCTFPVTGPQGTGILQLKAVRNG

A0A6J1GQN1 uncharacterized protein LOC111456591 isoform X11.6e-5485.94Show/hide
Query:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH
        +AKRL+SIFKRS  P+ ASSSS++P+ EGVNKSWGR AVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH

Query:  KRHSLSCTFPVTGPQGTGILQLKAVRNG
        KRHSLSCTFPV+GPQGTGI+QLKAVRNG
Subjt:  KRHSLSCTFPVTGPQGTGILQLKAVRNG

A0A6J1JLR1 uncharacterized protein LOC111488050 isoform X24.6e-5485.16Show/hide
Query:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH
        +AKR +SIFKRS  P+A  SSS++P+ EGVNKSWGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH

Query:  KRHSLSCTFPVTGPQGTGILQLKAVRNG
        KRHSLSCTFPV+GPQGTGI+QLKAVRNG
Subjt:  KRHSLSCTFPVTGPQGTGILQLKAVRNG

A0A6J1JQM9 uncharacterized protein LOC111488050 isoform X11.2e-5485.94Show/hide
Query:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH
        +AKR +SIFKRS  P+ ASSSS++P+ EGVNKSWGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAH

Query:  KRHSLSCTFPVTGPQGTGILQLKAVRNG
        KRHSLSCTFPV+GPQGTGI+QLKAVRNG
Subjt:  KRHSLSCTFPVTGPQGTGILQLKAVRNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20390.1 unknown protein2.3e-4268.5Show/hide
Query:  AKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAHK
        A+R  S FK        SS+S      G   S+GRKAVSFVLITVTGGVALSALDDL+IY  CSSKA+EK  N++ +I+AIGEPIEKGPWYNASLAV+H+
Subjt:  AKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAHK

Query:  RHSLSCTFPVTGPQGTGILQLKAVRNG
        RHS+SC+FPV GPQGTGIL LKAVRNG
Subjt:  RHSLSCTFPVTGPQGTGILQLKAVRNG

AT2G20390.2 unknown protein4.7e-4368.75Show/hide
Query:  AKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAHK
        A+R  S FK        SS+S      G   S+GRKAVSFVLITVTGGVALSALDDL+IY  CSSKA+EK  N++ +I+AIGEPIEKGPWYNASLAV+H+
Subjt:  AKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAHK

Query:  RHSLSCTFPVTGPQGTGILQLKAVRNGG
        RHS+SC+FPV GPQGTGIL LKAVRNGG
Subjt:  RHSLSCTFPVTGPQGTGILQLKAVRNGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAAGGTTGGTTTCCATATTCAAGCGCTCTTCAATTCCACACGCCGCTTCCAGCAGTTCCTTAAAGCCAGCGGTGGAAGGGGTGAATAAATCCTGGGGT
CGCAAAGCAGTCTCGTTTGTACTTATTACTGTTACTGGTGGTGTGGCTTTGAGTGCTTTGGATGACCTTGCCATTTATCATAGCTGTAGCAGCAAAGCCATAGAG
AAAGCCAGAAACAATCAAGCAGTTATAGATGCTATTGGAGAACCCATTGAAAAAGGACCATGGTACAATGCATCACTCGCAGTAGCTCATAAGAGGCATTCTCTA
TCCTGCACGTTTCCTGTAACAGGACCACAAGGCACAGGGATCCTCCAATTGAAGGCAGTTCGTAATGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAAGGTTGGTTTCCATATTCAAGCGCTCTTCAATTCCACACGCCGCTTCCAGCAGTTCCTTAAAGCCAGCGGTGGAAGGGGTGAATAAATCCTGGGGT
CGCAAAGCAGTCTCGTTTGTACTTATTACTGTTACTGGTGGTGTGGCTTTGAGTGCTTTGGATGACCTTGCCATTTATCATAGCTGTAGCAGCAAAGCCATAGAG
AAAGCCAGAAACAATCAAGCAGTTATAGATGCTATTGGAGAACCCATTGAAAAAGGACCATGGTACAATGCATCACTCGCAGTAGCTCATAAGAGGCATTCTCTA
TCCTGCACGTTTCCTGTAACAGGACCACAAGGCACAGGGATCCTCCAATTGAAGGCAGTTCGTAATGGAGGTTGA
Protein sequenceShow/hide protein sequence
MAKRLVSIFKRSSIPHAASSSSLKPAVEGVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIEKARNNQAVIDAIGEPIEKGPWYNASLAVAHKRHSL
SCTFPVTGPQGTGILQLKAVRNGG