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Lag0002231 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002231
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionlight-regulated protein-like
Genome locationchr4:40732927..40733556
RNA-Seq ExpressionLag0002231
SyntenyLag0002231
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR009856 - Light regulated Lir1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576101.1 Light-regulated protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.8e-6087.59Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQLQAA SLA PSSC+L PPTTK +AF I +RS+RRHPTSQT RP LKAKASAVGQDPSTVDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAK G
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPE
        GSVSE VDREYLQYDSPKTVFPAEACDDLGGEFCDP+
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPE
XP_022953556.1 light-regulated protein-like [Cucurbita moschata]3.5e-6589.51Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQLQAA SLA PSSC+L PPTTK +AF I +RS+RRHPTSQT RP LKAKASAVGQDPSTVDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
        GSVSE VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
XP_022991991.1 light-regulated protein, chloroplastic-like [Cucurbita maxima]2.7e-6588.81Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQLQAA SLA PSSC+L PPTTK +AF + +RS+RRHPTSQT RP LKAKASAVGQDPSTVDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
        GSVSE VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
XP_023547464.1 light-regulated protein, chloroplastic-like [Cucurbita pepo subsp. pepo]6.0e-6589.51Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQLQAA SLA PSSC+L PPTTK +AF I +RS RRHPTSQT RP LKAKASAVGQDPSTVDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
        GSVSE VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
XP_038906788.1 light-regulated protein, chloroplastic-like [Benincasa hispida]1.2e-6589.51Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQLQAALS+A PSSC L PPT KS+AF +++RS+ RHPTSQTQRP LKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKK 
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
        GSV+EPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
TrEMBL top hitse value%identityAlignment
A0A1S3CBQ8 light-regulated protein-like7.6e-5883.92Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQLQAALS+APP SC L PPT K +AF IQTRSL R       + TLKAKASAVGQ+PSTVDYSS+SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
         SV+EPV+REYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
A0A5D3DLY7 Light-regulated protein-like5.8e-5883.92Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQLQAALS+APP SC L PPT K +AF IQTRSL R       + TLKAKASAVGQ+PSTVDYSS+SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
         SV+EPV+REYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
A0A6J1GNA5 light-regulated protein-like1.7e-6589.51Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQLQAA SLA PSSC+L PPTTK +AF I +RS+RRHPTSQT RP LKAKASAVGQDPSTVDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
        GSVSE VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
A0A6J1JSC1 light-regulated protein, chloroplastic-like1.3e-6588.81Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQLQAA SLA PSSC+L PPTTK +AF + +RS+RRHPTSQT RP LKAKASAVGQDPSTVDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
        GSVSE VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Q39636 CR9 protein8.4e-5782.52Show/hide
Query:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
        MQ QAALS+A P SC L PPT KS+AF I TRS+ R       + TLKAKASAVGQDPSTVDYSS+SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG
Subjt:  MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG

Query:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
         SV+EPV+REYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
Subjt:  GSVSEPVDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY
SwissProt top hitse value%identityAlignment
Q03200 Light-regulated protein, chloroplastic6.9e-2461.11Show/hide
Query:  LKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGS--VSEPVDREYLQYDSPKTVFPAEACDDLGGEFC
        ++A A+AV  + + VDYSS  SVFP EACD +GGEAC+V+MYPE KL   A    S   +E VDR+YL YD P TVFP EACDDLGGEFC
Subjt:  LKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGS--VSEPVDREYLQYDSPKTVFPAEACDDLGGEFC
Q96500 Light-regulated protein 1, chloroplastic2.5e-2650Show/hide
Query:  SLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDY-SSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEP
        S++ P   FL P  TK+     +  SLR + +S          +S++  DP+TVDY SSI SVFPAEAC+ + G AC  ++YPEVKL  +       SEP
Subjt:  SLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDY-SSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEP

Query:  VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQK
        VDREY +Y+SPKTVF  EACDDLGGEFC+P++QK
Subjt:  VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQK
Arabidopsis top hitse value%identityAlignment
AT3G26740.1 CCR-like1.8e-2750Show/hide
Query:  SLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDY-SSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEP
        S++ P   FL P  TK+     +  SLR + +S          +S++  DP+TVDY SSI SVFPAEAC+ + G AC  ++YPEVKL  +       SEP
Subjt:  SLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDY-SSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEP

Query:  VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQK
        VDREY +Y+SPKTVF  EACDDLGGEFC+P++QK
Subjt:  VDREYLQYDSPKTVFPAEACDDLGGEFCDPEYQK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTGCAGGCAGCTCTTTCCCTAGCACCTCCATCATCATGCTTCCTCTTCCCACCAACCACTAAATCAATAGCCTTTCCAATCCAAACTAGGTCCCTGCGAAGGCA
CCCCACTTCTCAGACTCAACGTCCCACCCTAAAAGCAAAGGCAAGTGCGGTTGGACAAGACCCTTCAACCGTTGACTACAGCTCCATCTCCTCTGTTTTCCCAGCAGAGG
CTTGTGACACTGTTGGAGGGGAAGCTTGTGATGTTGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCCAAGAAGGGGGGAAGTGTTTCAGAGCCTGTTGATAGAGAG
TATCTGCAATATGACAGTCCCAAGACAGTTTTTCCAGCGGAGGCTTGTGATGATCTCGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTGCAGGCAGCTCTTTCCCTAGCACCTCCATCATCATGCTTCCTCTTCCCACCAACCACTAAATCAATAGCCTTTCCAATCCAAACTAGGTCCCTGCGAAGGCA
CCCCACTTCTCAGACTCAACGTCCCACCCTAAAAGCAAAGGCAAGTGCGGTTGGACAAGACCCTTCAACCGTTGACTACAGCTCCATCTCCTCTGTTTTCCCAGCAGAGG
CTTGTGACACTGTTGGAGGGGAAGCTTGTGATGTTGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCCAAGAAGGGGGGAAGTGTTTCAGAGCCTGTTGATAGAGAG
TATCTGCAATATGACAGTCCCAAGACAGTTTTTCCAGCGGAGGCTTGTGATGATCTCGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAG
Protein sequenceShow/hide protein sequence
MQLQAALSLAPPSSCFLFPPTTKSIAFPIQTRSLRRHPTSQTQRPTLKAKASAVGQDPSTVDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGGSVSEPVDRE
YLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY