CuGenDBv2

Gene ID	Lag0002232
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Coiled-coil domain-containing protein SCD2
Genome location	chr4:40734155..40735509
RNA-Seq Expression	Lag0002232
Synteny	Lag0002232
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039853.1 uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa]

2.3e-82

69.7

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Query:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH
        ME+FFSVQQIHTRC+SSHSIKLVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH

Query:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG
        TLPVAVVIDDFGDFF+ERRCQ KYANPRGRD+AMVRTLALCHNAVSLANQ R CQLVLSDTHHGESPRLIFIYKRWV TIFTIRGDGT WFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG

Query:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ
        N+CCLRT  AKYSIALQFLSLEEISED+ E+
Subjt:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ

XP_008459907.1 PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo]

1.0e-82

69.7

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Query:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH
        ME+FFSVQQIHTRC+SSHSIKLVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH

Query:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG
        TLPVAVVIDDFGDFF+ERRCQ KYANPRGRD+AMVRTLALCHNAVSLANQ R CQLVLSDTHHGESPRLIFIYKRWV TIFTIRGDG GWFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG

Query:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ
        N+CCLRT  AKYSIALQFLSLEEISED+ E+
Subjt:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ

XP_011656789.1 uncharacterized protein LOC101205665 [Cucumis sativus]

1.5e-81

69.7

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Query:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH
        ME+FFSVQQIHT C+SSHSIKLVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH

Query:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG
        TLPVAVVIDDFGDFF+ERRCQEKYANPRGRDLAMVRTLALC NAVSLANQ R CQLVLSDTHHGESPRLIFIYKRWV TIFTIRGDG GWFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG

Query:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ
         +CCLRT  AKYSIALQFLSLEEISED+ EQ
Subjt:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ

XP_022959968.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata]

1.7e-80

69.3

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Query:  RFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHHTL
        RFFSV+QI T+CDSSHSI LVSGPPS                                                     YLEDDEGI KYFSAFHLH TL
Subjt:  RFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHHTL

Query:  PVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCGNN
        PVAVVIDDFGDFF+ERRCQEKYANPRGRDLAMVRTLALCHNA+SLANQ R CQLVLSDTHHGESPRLIFIYKRWV TIFTIRGDG+GWFILRSINNCGN 
Subjt:  PVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCGNN

Query:  CCLRTTSAKYSIALQFLSLEEISEDNSE
        CCLRT SAKYSIALQFLSLEE+SED +E
Subjt:  CCLRTTSAKYSIALQFLSLEEISEDNSE

XP_038906786.1 uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida]

1.3e-80

68.83

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Query:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH
        ME+FFSV+QIHT CDSSHSI LVSGPPS                                                     YLEDDEGIKKYFSAFHLH 
Subjt:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH

Query:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG
        TLPVAVVIDDFGDFF+ERRCQ+KYANPRGRDLAMVRTLALCHNAVSLAN SR CQLVLSD +HGESPRLIFIYKRWV TIFTI GDG GWF LRSINNCG
Subjt:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG

Query:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ
        N+CCLR  SAKYSIALQFLSLEEISED+SEQ
Subjt:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9H1 Uncharacterized protein

7.3e-82

69.7

Show/hide

Query:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH
        ME+FFSVQQIHT C+SSHSIKLVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH

Query:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG
        TLPVAVVIDDFGDFF+ERRCQEKYANPRGRDLAMVRTLALC NAVSLANQ R CQLVLSDTHHGESPRLIFIYKRWV TIFTIRGDG GWFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG

Query:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ
         +CCLRT  AKYSIALQFLSLEEISED+ EQ
Subjt:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ

A0A1S3CAT0 uncharacterized protein LOC103498887

5.0e-83

69.7

Show/hide

Query:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH
        ME+FFSVQQIHTRC+SSHSIKLVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH

Query:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG
        TLPVAVVIDDFGDFF+ERRCQ KYANPRGRD+AMVRTLALCHNAVSLANQ R CQLVLSDTHHGESPRLIFIYKRWV TIFTIRGDG GWFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG

Query:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ
        N+CCLRT  AKYSIALQFLSLEEISED+ E+
Subjt:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ

A0A5A7T9Y8 Uncharacterized protein

1.1e-82

69.7

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Query:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH
        ME+FFSVQQIHTRC+SSHSIKLVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH

Query:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG
        TLPVAVVIDDFGDFF+ERRCQ KYANPRGRD+AMVRTLALCHNAVSLANQ R CQLVLSDTHHGESPRLIFIYKRWV TIFTIRGDGT WFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG

Query:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ
        N+CCLRT  AKYSIALQFLSLEEISED+ E+
Subjt:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ

A0A6J1H6C8 uncharacterized protein LOC111460863 isoform X1

8.0e-81

69.3

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Query:  RFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHHTL
        RFFSV+QI T+CDSSHSI LVSGPPS                                                     YLEDDEGI KYFSAFHLH TL
Subjt:  RFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHHTL

Query:  PVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCGNN
        PVAVVIDDFGDFF+ERRCQEKYANPRGRDLAMVRTLALCHNA+SLANQ R CQLVLSDTHHGESPRLIFIYKRWV TIFTIRGDG+GWFILRSINNCGN 
Subjt:  PVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCGNN

Query:  CCLRTTSAKYSIALQFLSLEEISEDNSE
        CCLRT SAKYSIALQFLSLEE+SED +E
Subjt:  CCLRTTSAKYSIALQFLSLEEISEDNSE

E5GB61 Uncharacterized protein

5.0e-83

69.7

Show/hide

Query:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH
        ME+FFSVQQIHTRC+SSHSIKLVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVQQIHTRCDSSHSIKLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHH

Query:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG
        TLPVAVVIDDFGDFF+ERRCQ KYANPRGRD+AMVRTLALCHNAVSLANQ R CQLVLSDTHHGESPRLIFIYKRWV TIFTIRGDG GWFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCG

Query:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ
        N+CCLRT  AKYSIALQFLSLEEISED+ E+
Subjt:  NNCCLRTTSAKYSIALQFLSLEEISEDNSEQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G23255.1 unknown protein

1.8e-40

57.72

Show/hide

Query:  YLEDDEGIKKYFSAFHLHHT--LPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVST
        Y++DDEGI+KYF+AFHLHH   LP AV+IDDFGD+F +        N R RD+AMVRTLALCHNA+  A ++  C+LVLS+T+HG+SPR +FIYKRW+  
Subjt:  YLEDDEGIKKYFSAFHLHHT--LPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVST

Query:  IFTIRGDGTGWFILRSINNCGNNCCLRTTSAKYSIALQFLSLEEISEDN
        IFTI+G G G F+L S     N+   R  SAKYSIALQ+L LE+I +D+
Subjt:  IFTIRGDGTGWFILRSINNCGNNCCLRTTSAKYSIALQFLSLEEISEDN

AT3G23255.2 unknown protein

1.9e-42

58.39

Show/hide

Query:  YLEDDEGIKKYFSAFHLHHT--LPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVST
        Y++DDEGI+KYF+AFHLHH   LP AV+IDDFGD+F +        N R RD+AMVRTLALCHNA+  AN+   C+LVLS+T+HG+SPR +FIYKRW+  
Subjt:  YLEDDEGIKKYFSAFHLHHT--LPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTHHGESPRLIFIYKRWVST

Query:  IFTIRGDGTGWFILRSINNCGNNCCLRTTSAKYSIALQFLSLEEISEDN
        IFTI+G G G F+L S     N+   R  SAKYSIALQ+L LE+I +D+
Subjt:  IFTIRGDGTGWFILRSINNCGNNCCLRTTSAKYSIALQFLSLEEISEDN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGAGGTTCTTCTCGGTGCAGCAAATCCACACTCGCTGCGACTCTTCCCACTCAATCAAGCTTGTTTCAGGGCCTCCTTCCTGGTATTTGGAGGACGACGAAGGAAT
TAAGAAGTACTTCTCTGCATTTCACCTGCATCATACACTTCCTGTGGCAGTTGTTATTGATGATTTTGGAGATTTTTTCGATGAAAGGCGATGTCAAGAAAAATATGCCA
ATCCTCGCGGAAGAGACTTGGCAATGGTTAGAACGCTAGCTCTTTGTCATAATGCCGTGAGCCTAGCAAATCAAAGTAGGTCTTGCCAACTCGTGTTGTCTGATACGCAC
CATGGAGAGTCCCCAAGGCTGATCTTCATATATAAGAGATGGGTTTCAACCATTTTCACCATTAGAGGGGATGGGACTGGATGGTTCATCCTGAGAAGTATAAACAATTG
TGGAAACAACTGTTGTTTGAGGACTACAAGTGCAAAGTACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAATTTCTGAAGACAATAGTGAACAATGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MERFFSVQQIHTRCDSSHSIKLVSGPPSWYLEDDEGIKKYFSAFHLHHTLPVAVVIDDFGDFFDERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRSCQLVLSDTH
HGESPRLIFIYKRWVSTIFTIRGDGTGWFILRSINNCGNNCCLRTTSAKYSIALQFLSLEEISEDNSEQ

Lag0002232 (gene) of Sponge gourd (AG-4) v1 genome