; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002293 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002293
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmaternal effect embryo arrest 60
Genome locationchr4:41357068..41363130
RNA-Seq ExpressionLag0002293
SyntenyLag0002293
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0752839.1 hypothetical protein [Gossypium gossypioides]1.8e-5674.39Show/hide
Query:  LLVVFLDHQRPRYGTGWTRQRQLTLHHRCVRRAFVDHPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHI
        ++  F+ ++R R+  G   +RQL LHHRC+R  F+  PGQHSLEN + CDAGID A+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA RAHI
Subjt:  LLVVFLDHQRPRYGTGWTRQRQLTLHHRCVRRAFVDHPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHI

Query:  NLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVAALVVLVSSVCFPWL
        NLKVLRLGM+ SAVGSVMGCLFLMLSMV+VI+IRLGMLSCGSKSAVH+V ALV+LVSS    ++
Subjt:  NLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVAALVVLVSSVCFPWL

XP_004148951.1 uncharacterized protein LOC101219594 [Cucumis sativus]5.4e-5392.91Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASA+GSVMGCLFLMLSMVDVIQIRLGM
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSSVCFPWL
        LSCGSKSAVHAV+AL+VLVSS    ++
Subjt:  LSCGSKSAVHAVAALVVLVSSVCFPWL

XP_008451246.1 PREDICTED: uncharacterized protein LOC103492593 [Cucumis melo]2.4e-5393.7Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASA+GSVMGCLFLMLSMVDVIQIRLGM
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSSVCFPWL
        LSCGSKSAVHAVAAL+VLVSS    ++
Subjt:  LSCGSKSAVHAVAALVVLVSSVCFPWL

XP_022991540.1 uncharacterized protein LOC111488123 isoform X1 [Cucurbita maxima]1.8e-5383.33Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSL+NSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMV+VIQIRLGM
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSSVCFPW------------LHCIRFELIPVA
        LSCGSKSAVHAVAAL+VLV+S                 LHC  FELI  A
Subjt:  LSCGSKSAVHAVAALVVLVSSVCFPW------------LHCIRFELIPVA

XP_038899808.1 uncharacterized protein LOC120087035 [Benincasa hispida]2.4e-5393.7Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASA+GSVMGCLFLMLSMVDVIQIRLGM
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSSVCFPWL
        LSCGSKSAVHAVAAL+VLVSS    ++
Subjt:  LSCGSKSAVHAVAALVVLVSSVCFPWL

TrEMBL top hitse value%identityAlignment
A0A0A0K8N3 Uncharacterized protein2.6e-5392.91Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASA+GSVMGCLFLMLSMVDVIQIRLGM
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSSVCFPWL
        LSCGSKSAVHAV+AL+VLVSS    ++
Subjt:  LSCGSKSAVHAVAALVVLVSSVCFPWL

A0A1S3BRT3 uncharacterized protein LOC1034925931.2e-5393.7Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASA+GSVMGCLFLMLSMVDVIQIRLGM
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSSVCFPWL
        LSCGSKSAVHAVAAL+VLVSS    ++
Subjt:  LSCGSKSAVHAVAALVVLVSSVCFPWL

A0A5A7UUP5 Uncharacterized protein1.2e-5393.7Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASA+GSVMGCLFLMLSMVDVIQIRLGM
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSSVCFPWL
        LSCGSKSAVHAVAAL+VLVSS    ++
Subjt:  LSCGSKSAVHAVAALVVLVSSVCFPWL

A0A6J1JT84 uncharacterized protein LOC111488123 isoform X18.9e-5483.33Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSL+NSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMV+VIQIRLGM
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSSVCFPW------------LHCIRFELIPVA
        LSCGSKSAVHAVAAL+VLV+S                 LHC  FELI  A
Subjt:  LSCGSKSAVHAVAALVVLVSSVCFPW------------LHCIRFELIPVA

A0A7J9CWE1 Uncharacterized protein8.6e-5774.39Show/hide
Query:  LLVVFLDHQRPRYGTGWTRQRQLTLHHRCVRRAFVDHPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHI
        ++  F+ ++R R+  G   +RQL LHHRC+R  F+  PGQHSLEN + CDAGID A+KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA RAHI
Subjt:  LLVVFLDHQRPRYGTGWTRQRQLTLHHRCVRRAFVDHPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHI

Query:  NLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVAALVVLVSSVCFPWL
        NLKVLRLGM+ SAVGSVMGCLFLMLSMV+VI+IRLGMLSCGSKSAVH+V ALV+LVSS    ++
Subjt:  NLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVAALVVLVSSVCFPWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01580.1 unknown protein1.7e-3663.41Show/hide
Query:  DHPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRL
        D P   +L + + C AG DV R L+VFEV+SF+FFLFSSLVAQG+KLAINLLNSK+ DE F+A+IN  VLR G++ +A GS++GC+FL+LS+VDVIQ+RL
Subjt:  DHPGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRL

Query:  GMLSCGSKSAVHAVAALVVLVSS
        G+LSCG+  A+H V  LVVLVSS
Subjt:  GMLSCGSKSAVHAVAALVVLVSS

AT3G07510.1 unknown protein1.9e-4885.12Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSLE  S CDA  DVA+KLLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR GM+ASAVGSVMGCLFLMLSMV+VIQIRLG+
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSS
        LSCGSKSA  AVA LV LVSS
Subjt:  LSCGSKSAVHAVAALVVLVSS

AT3G07510.2 unknown protein1.9e-4885.12Show/hide
Query:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM
        PGQHSLE  S CDA  DVA+KLLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR GM+ASAVGSVMGCLFLMLSMV+VIQIRLG+
Subjt:  PGQHSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGM

Query:  LSCGSKSAVHAVAALVVLVSS
        LSCGSKSA  AVA LV LVSS
Subjt:  LSCGSKSAVHAVAALVVLVSS

AT3G46890.1 BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1)2.0e-1341.04Show/hide
Query:  GIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAI----NLLNSKDVDEAFR------AHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGMLSCG
        G  +A +L+   V SFS FLFSSL+A  LK AI       N   ++E  R        +NL  LR+G++AS V SV+GC FL +++VD++QI+LG L C 
Subjt:  GIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAI----NLLNSKDVDEAFR------AHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGMLSCG

Query:  SKSAVHAVAA---LVVLVSSVCFPWLHCIRFELI
         K + HA+AA   LVVLV S    ++  + +  I
Subjt:  SKSAVHAVAA---LVVLVSSVCFPWLHCIRFELI

AT5G05950.1 maternal effect embryo arrest 603.6e-1541.73Show/hide
Query:  HSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRA-----HINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRL
        +SL     C     +A  L+ F V SF+ FLFSSL+A GLK A+ L  +     + R      ++N   LR GM+ S +GSV GC FLML++++V+QI+L
Subjt:  HSLENSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRA-----HINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRL

Query:  GMLSCGSKSAVH-AVAALVVLVSSVCF
        G L CG+    + AV  LV+LV S  F
Subjt:  GMLSCGSKSAVH-AVAALVVLVSSVCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTCGAAGTCACAGATTCCACCATCAATGGCCGAGTAAGCTCAATCTCTCCACCCCCATCTTCAAATTCTTCGCTCTTTCATCTGATTTTCTCTCTTTCTCACCA
GATCGGAGGCGTACCCAAAAGAGTACTACAATGGCCGGAGCAGAGGAGACGAAATCCGAACCTCCTCCTCGTCGTCTTCCTCGACCACCAGCGTCCACGTTACGGCACTG
GATGGACTCGTCAACGTCAACTCACTCTTCACCATCGCTGTGTTCGTAGGGCTTTCGTTGACCACCCCGGGCAGCACAGTCTCGAGAACTCCTCGGTCTGCGATGCCGGC
ATTGACGTCGCTCGGAAGCTTCTGGTGTTCGAGGTCGTCTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGTTTGAAGCTTGCGATTAATCTCTTGAATAG
TAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATCTGAAGGTGCTGCGATTGGGGATGTTGGCCTCCGCCGTTGGATCCGTGATGGGGTGCTTGTTTCTGATGCTGT
CGATGGTGGATGTCATTCAAATTCGCCTTGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCGGTGGCGGCGCTTGTTGTTCTGGTGTCCTCTGTTTGTTTCCCC
TGGCTCCATTGTATTAGATTTGAGCTCATTCCAGTTGCGAATTGGGAAGAAGTGGTGGAGAATGGTCGAGGTGATAAGCAAGATTTTCGTTATAGCTTCCCCTCCTCTTT
GCTTAGCTTCAAGGAAAAGCCACACAATGGAATATCTCAAATGTACTTAGAGGCTCTCGGGTTGTTGGTGGTTTCCGGAGCGACGGTGGTGGCATGGATCACAGTGTTGG
TGCCGTTGGCGTTCGTCGGAAACCAGCGGCGAGTTTTGGTGAAACAGGGAAGACAGATCACCGTCGTGTTGGTTAAAGAAAGAGGGCTTCCTGTTGTTGCTTTCGCGGCC
GTCTTCAGCTTCGTCACCGTCATTCGTTTGATGGAGATCAATCCACTTTCTATTTCTATGGGTTCCTTCTTGTTCCATGGATCAGAGATAAACCCTCCACCTTCCCACTT
TGGGTTTCGTCCTTCAATTACAGCCCCCTTCGAATTCTTTTCAATTTTTCCCTTGCCTCATTCTTCGTCCGGACGACTCTTCGTACAACCTCCCTCCATCCTTCGTGCAG
ACGATCGTTCGCAACCCCCTCTCCAACGACCGTACGCAGCCCCATCCCCGACGACCGTTCGCAATCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTCGAAGTCACAGATTCCACCATCAATGGCCGAGTAAGCTCAATCTCTCCACCCCCATCTTCAAATTCTTCGCTCTTTCATCTGATTTTCTCTCTTTCTCACCA
GATCGGAGGCGTACCCAAAAGAGTACTACAATGGCCGGAGCAGAGGAGACGAAATCCGAACCTCCTCCTCGTCGTCTTCCTCGACCACCAGCGTCCACGTTACGGCACTG
GATGGACTCGTCAACGTCAACTCACTCTTCACCATCGCTGTGTTCGTAGGGCTTTCGTTGACCACCCCGGGCAGCACAGTCTCGAGAACTCCTCGGTCTGCGATGCCGGC
ATTGACGTCGCTCGGAAGCTTCTGGTGTTCGAGGTCGTCTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGTTTGAAGCTTGCGATTAATCTCTTGAATAG
TAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATCTGAAGGTGCTGCGATTGGGGATGTTGGCCTCCGCCGTTGGATCCGTGATGGGGTGCTTGTTTCTGATGCTGT
CGATGGTGGATGTCATTCAAATTCGCCTTGGGATGCTGTCCTGTGGGAGTAAATCGGCTGTTCATGCGGTGGCGGCGCTTGTTGTTCTGGTGTCCTCTGTTTGTTTCCCC
TGGCTCCATTGTATTAGATTTGAGCTCATTCCAGTTGCGAATTGGGAAGAAGTGGTGGAGAATGGTCGAGGTGATAAGCAAGATTTTCGTTATAGCTTCCCCTCCTCTTT
GCTTAGCTTCAAGGAAAAGCCACACAATGGAATATCTCAAATGTACTTAGAGGCTCTCGGGTTGTTGGTGGTTTCCGGAGCGACGGTGGTGGCATGGATCACAGTGTTGG
TGCCGTTGGCGTTCGTCGGAAACCAGCGGCGAGTTTTGGTGAAACAGGGAAGACAGATCACCGTCGTGTTGGTTAAAGAAAGAGGGCTTCCTGTTGTTGCTTTCGCGGCC
GTCTTCAGCTTCGTCACCGTCATTCGTTTGATGGAGATCAATCCACTTTCTATTTCTATGGGTTCCTTCTTGTTCCATGGATCAGAGATAAACCCTCCACCTTCCCACTT
TGGGTTTCGTCCTTCAATTACAGCCCCCTTCGAATTCTTTTCAATTTTTCCCTTGCCTCATTCTTCGTCCGGACGACTCTTCGTACAACCTCCCTCCATCCTTCGTGCAG
ACGATCGTTCGCAACCCCCTCTCCAACGACCGTACGCAGCCCCATCCCCGACGACCGTTCGCAATCTTTAA
Protein sequenceShow/hide protein sequence
MLLEVTDSTINGRVSSISPPPSSNSSLFHLIFSLSHQIGGVPKRVLQWPEQRRRNPNLLLVVFLDHQRPRYGTGWTRQRQLTLHHRCVRRAFVDHPGQHSLENSSVCDAG
IDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVDVIQIRLGMLSCGSKSAVHAVAALVVLVSSVCFP
WLHCIRFELIPVANWEEVVENGRGDKQDFRYSFPSSLLSFKEKPHNGISQMYLEALGLLVVSGATVVAWITVLVPLAFVGNQRRVLVKQGRQITVVLVKERGLPVVAFAA
VFSFVTVIRLMEINPLSISMGSFLFHGSEINPPPSHFGFRPSITAPFEFFSIFPLPHSSSGRLFVQPPSILRADDRSQPPLQRPYAAPSPTTVRNL