; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002309 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002309
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEthylene-responsive transcription factor
Genome locationchr4:41542438..41542833
RNA-Seq ExpressionLag0002309
SyntenyLag0002309
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5560331.1 hypothetical protein RHGRI_003581 [Rhododendron griersonianum]4.2e-3365.41Show/hide
Query:  EIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYP-----LMNASSSESQSTS---------L
        E +GGD+ VKYRGVRRRPWGKFAAEIRDSAR G R+WLGTF TAEEAARAYDRAA+ MRGQLA LNFPEEYP        ASSS S + S          
Subjt:  EIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYP-----LMNASSSESQSTS---------L

Query:  RDDETERKEE-SVFEFECLDDKLLDELLDFDNE
        R++  ER ++  VFEFECLDDKLL+ELL+ D E
Subjt:  RDDETERKEE-SVFEFECLDDKLLDELLDFDNE

PON62613.1 AP2/ERF transcription factor [Parasponia andersonii]4.7e-3266.94Show/hide
Query:  GDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN-----ASSSESQSTSLRDDETERKEESVF
        G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL       +SS+ S S++ R+ ET+++ E VF
Subjt:  GDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN-----ASSSESQSTSLRDDETERKEESVF

Query:  EFECLDDKLLDELLDFDNEIN
        EFE LDDKLLDELLDF+ + N
Subjt:  EFECLDDKLLDELLDFDNEIN

XP_030498307.1 ethylene-responsive transcription factor ERF098-like [Cannabis sativa]1.9e-3366.67Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-----------NASSSESQSTSLRDDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP +           ++SSS S S+++R+ ET+++
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-----------NASSSESQSTSLRDDETERK

Query:  EESVFEFECLDDKLLDELLDFDNEIN
        E  VFEFE LDDKLLDELLDFDN+ N
Subjt:  EESVFEFECLDDKLLDELLDFDNEIN

XP_038896382.1 ethylene-responsive transcription factor 14-like [Benincasa hispida]1.5e-5180Show/hide
Query:  MEDRRRRAPEID---------GGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQ
        MED R+R PEI+         GG+RCVKYRGVRRRPWGKFAAEIRDS RRG RIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM  SS ESQ
Subjt:  MEDRRRRAPEID---------GGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQ

Query:  STSLRDDETERKEESVFEFECLDDKLLDELLDFDNEINSK
        S+SL++DETERKEE+V EFECLD+ LLDELLDF  EINSK
Subjt:  STSLRDDETERKEESVFEFECLDDKLLDELLDFDNEINSK

XP_042496191.1 ethylene-responsive transcription factor ERF098-like [Macadamia integrifolia]2.1e-3266.67Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL----MNASSSESQSTSLRDDETERKE--ESVFEFE
        VKYRGVRRRPWGKFAAEIRDS R GVR+WLGTF TAEEAARAYD+AAFRMRG LA LNFP+EYP      ++ SS S S+SLR++  +++   + V E E
Subjt:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL----MNASSSESQSTSLRDDETERKE--ESVFEFE

Query:  CLDDKLLDELLDFDNEINSK
        CLDDKLLDELL  D + N K
Subjt:  CLDDKLLDELLDFDNEINSK

TrEMBL top hitse value%identityAlignment
A0A2P5CNI8 AP2/ERF transcription factor2.3e-3266.94Show/hide
Query:  GDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN-----ASSSESQSTSLRDDETERKEESVF
        G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL       +SS+ S S++ R+ ET+++ E VF
Subjt:  GDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN-----ASSSESQSTSLRDDETERKEESVF

Query:  EFECLDDKLLDELLDFDNEIN
        EFE LDDKLLDELLDF+ + N
Subjt:  EFECLDDKLLDELLDFDNEIN

A0A2P5E849 AP2/ERF transcription factor6.6e-3263.57Show/hide
Query:  GDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNA-------------SSSESQSTSLRDDET
        G + V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAAF MRG  A LNFP EYPL  A             SS+ S S++ R+ ET
Subjt:  GDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNA-------------SSSESQSTSLRDDET

Query:  ERKEESVFEFECLDDKLLDELLDFDNEIN
        +++ E VFEFE LDDKLLDELLDF+ + N
Subjt:  ERKEESVFEFECLDDKLLDELLDFDNEIN

A0A6A1W1S6 AP2/ERF domain-containing protein8.6e-3258.57Show/hide
Query:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL----MNASSSESQSTSLR
        M D  +   E +G +  VKYRGVRRRPWGKFAAEIRDS R+G R+WLGTF TAEEAARAYD+AA+ MRG LA LNFP EYPL     +A+ S S S+S R
Subjt:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL----MNASSSESQSTSLR

Query:  DDETERKE-----ESVFEFECLDDKLLDELLDFDNEINSK
            E+       + VFEFECLDDKLL+ELL+++ + N K
Subjt:  DDETERKE-----ESVFEFECLDDKLLDELLDFDNEINSK

A0A7J6GXW5 AP2/ERF domain-containing protein9.2e-3466.67Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-----------NASSSESQSTSLRDDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP +           ++SSS S S+++R+ ET+++
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-----------NASSSESQSTSLRDDETERK

Query:  EESVFEFECLDDKLLDELLDFDNEIN
        E  VFEFE LDDKLLDELLDFDN+ N
Subjt:  EESVFEFECLDDKLLDELLDFDNEIN

A0A803PGP0 Uncharacterized protein9.2e-3466.67Show/hide
Query:  DRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-----------NASSSESQSTSLRDDETERK
        D+ VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP +           ++SSS S S+++R+ ET+++
Subjt:  DRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-----------NASSSESQSTSLRDDETERK

Query:  EESVFEFECLDDKLLDELLDFDNEIN
        E  VFEFE LDDKLLDELLDFDN+ N
Subjt:  EESVFEFECLDDKLLDELLDFDNEIN

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI55.4e-2360.38Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNAS--------SSESQSTSLRDD----ETERKEES
        KYRGVRRRPWGK+AAEIRDSAR G R+WLGTFETAEEAA AYDRAAFRMRG  A LNFP E  ++NAS         S S +T+   D    E       
Subjt:  KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNAS--------SSESQSTSLRDD----ETERKEES

Query:  VFEFEC
        VFE  C
Subjt:  VFEFEC

P93822 Ethylene-responsive transcription factor 145.0e-2954.26Show/hide
Query:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDET
        M+   R +    GG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SSS + ++S      
Subjt:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDET

Query:  ERKEESVFEFECLDDKLLDELLDFDNEIN
            + VFEFE LDD +LDELL++    N
Subjt:  ERKEESVFEFECLDDKLLDELLDFDNEIN

Q9LSX0 Ethylene-responsive transcription factor ERF0964.7e-2760.91Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDETERKEES-----VFEFECL
        KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY   N  S  S ST++    +     S     VFEFE L
Subjt:  KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDETERKEES-----VFEFECL

Query:  DDKLLDELLD
        DD +L+ELL+
Subjt:  DDKLLDELLD

Q9LTC5 Ethylene-responsive transcription factor ERF0985.4e-3156.39Show/hide
Query:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNASSSES
        ME   R +      D+  ++RGVRRRPWGKFAAEIRD +R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P   +SSS S
Subjt:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNASSSES

Query:  QSTSLRDDETERKEESVFEFECLDDKLLDELLD
         S S   + + + +  VFEFE LDDK+L+ELLD
Subjt:  QSTSLRDDETERKEESVFEFECLDDKLLDELLD

Q9LTC6 Ethylene-responsive transcription factor ERF0953.3e-2857.98Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NASSSESQSTSLRDDETERKEESVFEF
        +KYRGVR+RPWGK+AAEIRDSAR G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M       + ++  S S+  R          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NASSSESQSTSLRDDETERKEESVFEF

Query:  ECLDDKLLDELLDFDNEIN
        E LDD LL+ELLD+    N
Subjt:  ECLDDKLLDELLDFDNEIN

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 143.6e-3054.26Show/hide
Query:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDET
        M+   R +    GG    KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SSS + ++S      
Subjt:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDET

Query:  ERKEESVFEFECLDDKLLDELLDFDNEIN
            + VFEFE LDD +LDELL++    N
Subjt:  ERKEESVFEFECLDDKLLDELLDFDNEIN

AT3G23220.1 Integrase-type DNA-binding superfamily protein2.3e-2957.98Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NASSSESQSTSLRDDETERKEESVFEF
        +KYRGVR+RPWGK+AAEIRDSAR G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M       + ++  S S+  R          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NASSSESQSTSLRDDETERKEESVFEF

Query:  ECLDDKLLDELLDFDNEIN
        E LDD LL+ELLD+    N
Subjt:  ECLDDKLLDELLDFDNEIN

AT3G23230.1 Integrase-type DNA-binding superfamily protein3.8e-3256.39Show/hide
Query:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNASSSES
        ME   R +      D+  ++RGVRRRPWGKFAAEIRD +R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P   +SSS S
Subjt:  MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNASSSES

Query:  QSTSLRDDETERKEESVFEFECLDDKLLDELLD
         S S   + + + +  VFEFE LDDK+L+ELLD
Subjt:  QSTSLRDDETERKEESVFEFECLDDKLLDELLD

AT5G43410.1 Integrase-type DNA-binding superfamily protein3.3e-2860.91Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDETERKEES-----VFEFECL
        KYRGVRRRPWGK+AAEIRDS + G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY   N  S  S ST++    +     S     VFEFE L
Subjt:  KYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDETERKEES-----VFEFECL

Query:  DDKLLDELLD
        DD +L+ELL+
Subjt:  DDKLLDELLD

AT5G47230.1 ethylene responsive element binding factor 51.0e-2162.5Show/hide
Query:  YRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDE
        YRGVR+RPWGKFAAEIRD  +RG R+WLGTF+TA EAARAYD AAFR+RG  A LNFP E       + E +    RDD+
Subjt:  YRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCGCCGCCGGAGAGCACCGGAGATCGACGGCGGAGATAGGTGTGTGAAGTACAGGGGAGTGCGGCGACGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGGGA
CTCGGCGCGGCGGGGGGTTCGGATTTGGCTGGGGACATTCGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCCGCGTTCAGAATGAGAGGTCAATTGGCCACTC
TGAATTTTCCGGAAGAGTATCCATTGATGAACGCTTCGAGCTCTGAATCTCAATCGACTTCATTGCGAGATGATGAAACAGAGAGAAAAGAGGAATCGGTTTTTGAATTT
GAGTGTTTGGATGATAAATTGTTGGATGAGCTTCTCGACTTTGACAACGAAATCAATTCTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATCGCCGCCGGAGAGCACCGGAGATCGACGGCGGAGATAGGTGTGTGAAGTACAGGGGAGTGCGGCGACGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGGGA
CTCGGCGCGGCGGGGGGTTCGGATTTGGCTGGGGACATTCGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCCGCGTTCAGAATGAGAGGTCAATTGGCCACTC
TGAATTTTCCGGAAGAGTATCCATTGATGAACGCTTCGAGCTCTGAATCTCAATCGACTTCATTGCGAGATGATGAAACAGAGAGAAAAGAGGAATCGGTTTTTGAATTT
GAGTGTTTGGATGATAAATTGTTGGATGAGCTTCTCGACTTTGACAACGAAATCAATTCTAAGTGA
Protein sequenceShow/hide protein sequence
MEDRRRRAPEIDGGDRCVKYRGVRRRPWGKFAAEIRDSARRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNASSSESQSTSLRDDETERKEESVFEF
ECLDDKLLDELLDFDNEINSK