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Lag0002345 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002345
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr4:41906922..41907343
RNA-Seq ExpressionLag0002345
SyntenyLag0002345
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]1.7e-0548.98Show/hide
Query:  DFDLICVGAWAIWNDRNHLVYNRPIPTIEERCTWILDYIADYRKANRPN
        DFDL+ VG WAIWNDRN +   R IP  + R  WIL Y+ D++  + P+
Subjt:  DFDLICVGAWAIWNDRNHLVYNRPIPTIEERCTWILDYIADYRKANRPN
TrEMBL top hitse value%identityAlignment
A0A6J1CTE3 uncharacterized protein LOC1110145788.3e-0648.98Show/hide
Query:  DFDLICVGAWAIWNDRNHLVYNRPIPTIEERCTWILDYIADYRKANRPN
        DFDL+ VG WAIWNDRN +   R IP  + R  WIL Y+ D++  + P+
Subjt:  DFDLICVGAWAIWNDRNHLVYNRPIPTIEERCTWILDYIADYRKANRPN
A0A7J8Z422 RNase H domain-containing protein6.0e-0431.4Show/hide
Query:  LICVGAWAIWNDRNHLVYNRPIPTIEERCTWILDYIADYRKANRPNPKSIVDKQGTLLAGSSSSSNICITPICAKAAAILEGLRFA
        +I V  WAIW  RN  V+ R + ++EE  T+I  +  +YR     + +++ + +G ++       N+  + + A+A AIL GL+FA
Subjt:  LICVGAWAIWNDRNHLVYNRPIPTIEERCTWILDYIADYRKANRPNPKSIVDKQGTLLAGSSSSSNICITPICAKAAAILEGLRFA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAGAAGATCAGTGGATACTTATGAGTACATGGCAGGATTTCGATCTTATCTGTGTAGGAGCTTGGGCGATATGGAATGATAGAAATCATTTGGTGTATAATCG
GCCTATTCCTACCATTGAGGAACGATGCACGTGGATTCTTGATTATATTGCCGATTATCGCAAGGCTAATCGACCGAACCCCAAGTCTATAGTAGATAAGCAAGGTACTT
TGCTAGCAGGGTCATCGTCGTCTTCCAATATTTGTATCACTCCAATTTGTGCAAAAGCGGCGGCTATTCTTGAAGGATTACGTTTTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATAGAAGATCAGTGGATACTTATGAGTACATGGCAGGATTTCGATCTTATCTGTGTAGGAGCTTGGGCGATATGGAATGATAGAAATCATTTGGTGTATAATCG
GCCTATTCCTACCATTGAGGAACGATGCACGTGGATTCTTGATTATATTGCCGATTATCGCAAGGCTAATCGACCGAACCCCAAGTCTATAGTAGATAAGCAAGGTACTT
TGCTAGCAGGGTCATCGTCGTCTTCCAATATTTGTATCACTCCAATTTGTGCAAAAGCGGCGGCTATTCTTGAAGGATTACGTTTTGCCTGA
Protein sequenceShow/hide protein sequence
MDIEDQWILMSTWQDFDLICVGAWAIWNDRNHLVYNRPIPTIEERCTWILDYIADYRKANRPNPKSIVDKQGTLLAGSSSSSNICITPICAKAAAILEGLRFA