CuGenDBv2

Gene ID	Lag0002395
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Methylthioribose-1-phosphate isomerase
Genome location	chr4:42415646..42416976
RNA-Seq Expression	Lag0002395
Synteny	Lag0002395
Gene Ontology terms	GO:0019284 - L-methionine salvage from S-adenosylmethionine (biological process) GO:0019509 - L-methionine salvage from methylthioadenosine (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KOM39956.1 hypothetical protein LR48_Vigan04g015400, partial [Vigna angularis]

1.4e-05

67.92

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKV-IFSIS
        EERSPKELLN+RGGL E VA SGISV     DV+PA L+SGII EKV ++S+S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKV-IFSIS

XP_021750103.1 methylthioribose-1-phosphate isomerase-like [Chenopodium quinoa]

2.4e-05

67.31

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS
        EERSPKELLNSRGGL E VA SGISV     DV+PA L+SGII EK + + S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS

XP_021750206.1 methylthioribose-1-phosphate isomerase-like [Chenopodium quinoa]

2.4e-05

67.31

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS
        EERSPKELLNSRGGL E VA SGISV     DV+PA L+SGII EK + + S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS

XP_021756686.1 methylthioribose-1-phosphate isomerase-like isoform X2 [Chenopodium quinoa]

2.4e-05

67.31

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS
        EERSPKELLNSRGGL E VA SGISV     DV+PA L+SGII EK + + S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS

XP_021757890.1 methylthioribose-1-phosphate isomerase-like [Chenopodium quinoa]

2.4e-05

67.31

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS
        EERSPKELLNSRGGL E VA SGISV     DV+PA L+SGII EK + + S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS

TrEMBL top hits

e value

%identity

Alignment

A0A0L9UBA6 Uncharacterized protein (Fragment)

6.9e-06

67.92

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKV-IFSIS
        EERSPKELLN+RGGL E VA SGISV     DV+PA L+SGII EKV ++S+S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKV-IFSIS

A0A803M8P2 Uncharacterized protein

1.2e-05

67.31

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS
        EERSPKELLNSRGGL E VA SGISV     DV+PA L+SGII EK + + S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS

A0A803MF53 Uncharacterized protein

1.2e-05

67.31

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS
        EERSPKELLNSRGGL E VA SGISV     DV+PA L+SGII EK + + S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS

A0A803NCW8 Uncharacterized protein

1.2e-05

67.31

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS
        EERSPKELLNSRGGL E VA SGISV     DV+PA L+SGII EK + + S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS

A0A803NCW9 Uncharacterized protein

1.2e-05

67.31

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS
        EERSPKELLNSRGGL E VA SGISV     DV+PA L+SGII EK + + S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS

SwissProt top hits

e value

%identity

Alignment

B9HCR2 Methylthioribose-1-phosphate isomerase

1.6e-07

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS
        EERSPKE+LN+RGGL E VA SGISV     DV+PA L+SGII EK + +
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS

B9RR88 Methylthioribose-1-phosphate isomerase

4.2e-08

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS
        EERSPKELLNSRGGL E VA SGISV     DV+PA L+SGII EK + +
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS

D7TCD0 Methylthioribose-1-phosphate isomerase

3.5e-07

58.93

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSISWKLF
        EERSPKELLNSRGGL E VA SGI V     DV+PA L++GII EK + + +  +F
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSISWKLF

Q948X8 Methylthioribose-1-phosphate isomerase

3.5e-07

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS
        EERSPKELL++RGGL E VA SGISV     DV+PA L+SGII EK + +
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS

Q9AYT7 Methylthioribose-1-phosphate isomerase

5.1e-06

59.62

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS
        EERSPKELLNS GGL + VA SGISV     DV+PA L++ II EK + + S
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFSIS

Arabidopsis top hits

e value

%identity

Alignment

AT2G05830.1 NagB/RpiA/CoA transferase-like superfamily protein

4.0e-06

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS
        EERSPKEL+++ GGL E +A  GISV     D++PA L++GII EK + +
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS

AT2G05830.2 NagB/RpiA/CoA transferase-like superfamily protein

4.0e-06

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS
        EERSPKEL+++ GGL E +A  GISV     D++PA L++GII EK + +
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS

AT2G05830.3 NagB/RpiA/CoA transferase-like superfamily protein

4.0e-06

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS
        EERSPKEL+++ GGL E +A  GISV     D++PA L++GII EK + +
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS

AT2G05830.4 NagB/RpiA/CoA transferase-like superfamily protein

4.0e-06

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Query:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS
        EERSPKEL+++ GGL E +A  GISV     D++PA L++GII EK + +
Subjt:  EERSPKELLNSRGGLEELVATSGISV----IDVSPAYLVSGIIAEKVIFS

Sequences

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CDS sequence

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ATGTCACTTTCCTTCGCTCTAATACAGTCCGTTGCCGCCAACGAAACCAAGTTCTTCTGCCGGCCGCCGCCGACGTCGCAGGCGCAGCAGCAGCCTTCTGCCGGCTGGTC
GATTGCCACCGTCCCTGCGAGCTCTCTCTCTCACATTGCAATCCGGCGGCGCCACATTATAAAATTGCTCTTCCGAGTCTCCGACTGCCCCCGACGCCGCCGGCCACATC
AAGCTTCAGTTCAGTCCTATCTCTGTAATCCGTATTTATTTCCCTCCCTTCCTTCATTCAAGCTTCGGCTCGTTCGCATAATAGATAATACCGCCACCACTGGATGTCTG
GATTGGACACCACCTCTCAAGTTTTCGTCTCACCATTGTTTCTTTCATCCTCCTCGGACTGAAGAAAGGTCTCCCAAGGAGTTGTTGAACTCTCGTGGAGGTCTCGAGGA
GCTAGTGGCTACATCTGGTATCTCTGTTATTGATGTTAGTCCGGCTTATTTGGTTTCTGGAATCATAGCAGAGAAGGTAATCTTCAGTATTTCCTGGAAACTGTTTAGGA
AAGTTGAAAGCTTGATATTACCATGA

mRNA sequence

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Protein sequence

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MSLSFALIQSVAANETKFFCRPPPTSQAQQQPSAGWSIATVPASSLSHIAIRRRHIIKLLFRVSDCPRRRRPHQASVQSYLCNPYLFPSLPSFKLRLVRIIDNTATTGCL
DWTPPLKFSSHHCFFHPPRTEERSPKELLNSRGGLEELVATSGISVIDVSPAYLVSGIIAEKVIFSISWKLFRKVESLILP

Lag0002395 (gene) of Sponge gourd (AG-4) v1 genome