; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002411 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002411
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionABC transporter B family member 20-like
Genome locationchr4:42617574..42618652
RNA-Seq ExpressionLag0002411
SyntenyLag0002411
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033034.1 ABC transporter B family member 20 [Cucurbita argyrosperma subsp. argyrosperma]7.0e-1967.42Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRVVYIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

XP_022133515.1 ABC transporter B family member 20 isoform X1 [Momordica charantia]7.0e-1967.42Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRVVYIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

XP_022958077.1 ABC transporter B family member 6-like [Cucurbita moschata]7.0e-1967.42Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRVVYIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

XP_022990200.1 ABC transporter B family member 6-like [Cucurbita maxima]7.0e-1967.42Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRVVYIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

XP_023534705.1 ABC transporter B family member 6-like [Cucurbita pepo subsp. pepo]7.0e-1967.42Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRVVYIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

TrEMBL top hitse value%identityAlignment
A0A6J1BVG5 ABC transporter B family member 20 isoform X13.4e-1967.42Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRVVYIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

A0A6J1FFM1 ABC transporter B family member 20 isoform X14.4e-1966.29Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRV+YIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

A0A6J1H0X7 ABC transporter B family member 6-like3.4e-1967.42Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRVVYIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

A0A6J1JPG7 ABC transporter B family member 6-like3.4e-1967.42Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRVVYIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

A0A6J1JUU7 ABC transporter B family member 6 isoform X14.4e-1966.29Show/hide
Query:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY
        L LRV+YIAIGVFVAGWI                  +YVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F+
Subjt:  LVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFY

SwissProt top hitse value%identityAlignment
Q8LPK2 ABC transporter B family member 22.7e-0528.57Show/hide
Query:  LRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFYYNFA
        L  VY+++ +  + W+                   Y++ +L+QD+S FDT  + G+++S + SD+L+++ ALSEK   ++H  ++F   FA
Subjt:  LRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFYYNFA

Q8LPT1 ABC transporter B family member 62.3e-2062.11Show/hide
Query:  NSIMELSLVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF
        N ++ELSL   +VYIA GVF++GWI                  KYVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F
Subjt:  NSIMELSLVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF

Q9LJX0 ABC transporter B family member 193.5e-0544.83Show/hide
Query:  VAGWIGKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF
        VA    KY++ +L QD+ FFDT    GDIV  V +D LL++ A+SEK   +IH  + F
Subjt:  VAGWIGKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF

Q9M3B9 ABC transporter B family member 201.9e-1962.22Show/hide
Query:  LSLVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF
        + L L +VYIA GVF++GWI                  KYVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F
Subjt:  LSLVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF

Q9SGY1 ABC transporter B family member 105.1e-0435.71Show/hide
Query:  YVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFYYNFA
        Y++ +L+QD+S FDT  + G+++S + S++L+++ A+SEK   ++H  ++F   FA
Subjt:  YVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFYYNFA

Arabidopsis top hitse value%identityAlignment
AT1G10680.1 P-glycoprotein 103.6e-0535.71Show/hide
Query:  YVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFYYNFA
        Y++ +L+QD+S FDT  + G+++S + S++L+++ A+SEK   ++H  ++F   FA
Subjt:  YVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFYYNFA

AT2G39480.1 P-glycoprotein 61.6e-2162.11Show/hide
Query:  NSIMELSLVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF
        N ++ELSL   +VYIA GVF++GWI                  KYVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F
Subjt:  NSIMELSLVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF

AT3G28860.1 ATP binding cassette subfamily B192.5e-0644.83Show/hide
Query:  VAGWIGKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF
        VA    KY++ +L QD+ FFDT    GDIV  V +D LL++ A+SEK   +IH  + F
Subjt:  VAGWIGKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF

AT3G55320.1 P-glycoprotein 201.4e-2062.22Show/hide
Query:  LSLVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF
        + L L +VYIA GVF++GWI                  KYVQVLLNQDMSFFDT+GNNGDIVSQVLSDVLLI+SALSEK   +IHN A F
Subjt:  LSLVLRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKF

AT4G25960.1 P-glycoprotein 21.9e-0628.57Show/hide
Query:  LRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFYYNFA
        L  VY+++ +  + W+                   Y++ +L+QD+S FDT  + G+++S + SD+L+++ ALSEK   ++H  ++F   FA
Subjt:  LRVVYIAIGVFVAGWI-----------------GKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEK---WIHNTAKFYYNFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACTCAATTATGGAGTTGAGTCTTGTTTTAAGAGTTGTTTATATTGCTATTGGTGTTTTCGTTGCTGGTTGGATTGGTAAATATGTTCAAGTGCTACTTAATCA
GGATATGAGTTTCTTTGATACATTTGGCAACAATGGGGATATTGTGAGCCAAGTACTGAGTGATGTGCTGCTCATTCGGTCTGCTCTTAGTGAAAAATGGATTCATAACA
CTGCGAAGTTCTACTACAACTTTGCCTTTTATAATATGGATAGTGATGGAGTCGAACAAGTGAATAACCTCAAGATTATATTAGATGATCTAACCAAAGGGGATAGGAGC
CCTTTAAATAGGCTATCCACAGGCGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACTCAATTATGGAGTTGAGTCTTGTTTTAAGAGTTGTTTATATTGCTATTGGTGTTTTCGTTGCTGGTTGGATTGGTAAATATGTTCAAGTGCTACTTAATCA
GGATATGAGTTTCTTTGATACATTTGGCAACAATGGGGATATTGTGAGCCAAGTACTGAGTGATGTGCTGCTCATTCGGTCTGCTCTTAGTGAAAAATGGATTCATAACA
CTGCGAAGTTCTACTACAACTTTGCCTTTTATAATATGGATAGTGATGGAGTCGAACAAGTGAATAACCTCAAGATTATATTAGATGATCTAACCAAAGGGGATAGGAGC
CCTTTAAATAGGCTATCCACAGGCGGTTAG
Protein sequenceShow/hide protein sequence
MENSIMELSLVLRVVYIAIGVFVAGWIGKYVQVLLNQDMSFFDTFGNNGDIVSQVLSDVLLIRSALSEKWIHNTAKFYYNFAFYNMDSDGVEQVNNLKIILDDLTKGDRS
PLNRLSTGG