CuGenDBv2

Gene ID	Lag0002423
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	General transcription and DNA repair factor IIH helicase subunit XPD
Genome location	chr4:42729528..42739775
RNA-Seq Expression	Lag0002423
Synteny	Lag0002423
Gene Ontology terms	GO:0006366 - transcription by RNA polymerase II (biological process) GO:0006979 - response to oxidative stress (biological process) GO:0009411 - response to UV (biological process) GO:0033683 - nucleotide-excision repair, DNA incision (biological process) GO:0045951 - positive regulation of mitotic recombination (biological process) GO:0000717 - nucleotide-excision repair, DNA duplex unwinding (biological process) GO:0005634 - nucleus (cellular component) GO:0016887 - ATPase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0003684 - damaged DNA binding (molecular function) GO:0003678 - DNA helicase activity (molecular function)
InterPro domains	IPR001945 - RAD3/XPD family IPR045028 - Helicase superfamily 1/2, DinG/Rad3-like IPR027417 - P-loop containing nucleoside triphosphate hydrolase IPR026960 - Reverse transcriptase zinc-binding domain IPR014013 - Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type IPR013020 - ATP-dependent helicase Rad3/Chl1-like IPR010643 - Helical and beta-bridge domain IPR010614 - DEAD2 IPR006555 - ATP-dependent helicase, C-terminal IPR006554 - Helicase-like, DEXD box c2 type IPR002464 - DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAF2262424.1 unnamed protein product [Brassica napus]

0.0e+00

70.35

Show/hide

Query:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM
        EGEGS+E +Y  EI     S   S +++IINDI  FVLYMHQQ+PS+LQDMS +FD L  E+ +L + L Q ++K   RRK   R REV+  IK+M+KLM
Subjt:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL
         ++S  ++A++LLI E P +Q V+LILG +PLRPQ  YEL F H   V+R   DF K KA E LS+K IR LIS  AGS S PGP +LF+LV+AP+S NL
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL

Query:  PLHFIPKREFRYSKKI-------------------------VPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENL
        P HF+PKR+FRY++K+                         VPLKLRFKCK Q  +  +   SD    +        ++ + SI +      LS  +   
Subjt:  PLHFIPKREFRYSKKI-------------------------VPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENL

Query:  PAAAVVAAALVLRRKLVTGGASTMKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTV
        P   +  +    RR+        M F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTV
Subjt:  PAAAVVAAALVLRRKLVTGGASTMKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTV

Query:  HEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTL
        HEMEKTL EL++LHDYQV  LG +A+ILA+GLSSRKNLCVNP+VLA+ENRDSVDA CRK TASWVRA+AAENPNV  C++FE YEKA  +A+LPPGVYTL
Subjt:  HEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTL

Query:  QDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETD
        +DLRAFG  +GWCPYFLARHMVQFANV+VYSYQYLLDPKVA IISKE+Q+ESV+VFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TD
Subjt:  QDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETD

Query:  AGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYD
        AGRLRAEYNRL+EGLA RG+L  +D WL+NPALP+DILKEAVPGNIRRAEHF+HVLRRL+QYLEGRLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYD
Subjt:  AGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYD

Query:  RLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVV
        RLHSLMMTLEITDTDEFL IQT+CDFATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLL+FNPVV
Subjt:  RLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVV

Query:  SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVET
        SRSF MS+TRDCICPMVLTRGSDQLPVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEI Q KLVF ETQDVVET
Subjt:  SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVET

Query:  TLALDNYRKACDCGRGAVFFSVAR
        TLALDNYR+ACDCGRGAVFFSVAR
Subjt:  TLALDNYRKACDCGRGAVFFSVAR

CAG7900320.1 unnamed protein product [Brassica rapa]

0.0e+00

70.35

Show/hide

Query:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM
        EGEGS+E +Y  +I     S   S +++IINDI  FVLYMHQQ+PS+LQDMS +FD L  E+ +L + L Q ++K   RRK   R REV+  IK+M+KLM
Subjt:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL
         ++S  ++A++LLI E P +Q V+LILG +PLRPQ  YEL F H   V+R   DF K+KA E LS+K IR LIS  AGS S PGP +LF+LV+AP S NL
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL

Query:  PLHFIPKREFRYSKKI-------------------------VPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENL
        P HF+PKR+FRY++K+                         VPLKLRFKCK Q  +  +   SD    +        ++ + SI +      LS  +   
Subjt:  PLHFIPKREFRYSKKI-------------------------VPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENL

Query:  PAAAVVAAALVLRRKLVTGGASTMKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTV
        P   +  +    RRK        M F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTV
Subjt:  PAAAVVAAALVLRRKLVTGGASTMKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTV

Query:  HEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTL
        HEMEKTL EL++LHDYQV  LG +A+ILA+GLSSRKNLCVNP+VLA+ENRDSVDA CRK TASWVRA+AAENPNV  C++FE YEKA  +A+LPPGVYTL
Subjt:  HEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTL

Query:  QDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETD
        +DLRAFG  +GWCPYFLARHMVQFANV+VYSYQYLLDPKVA IISKE+Q+ESV+VFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TD
Subjt:  QDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETD

Query:  AGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYD
        AGRLRAEYNRL+EGLA RG+L  +D WL+NPALP+DILKEAVPGNIRRAEHF+HVLRRL+QYLEGRLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYD
Subjt:  AGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYD

Query:  RLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVV
        RLHSLMMTLEITDTDEFL IQT+CDFATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLL+FNPVV
Subjt:  RLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVV

Query:  SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVET
        SRSF MS+TRDCICPMVLTRGSDQLPVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEI Q KLVF ETQDVVET
Subjt:  SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVET

Query:  TLALDNYRKACDCGRGAVFFSVAR
        TLALDNYR+ACDCGRGAVFFSVAR
Subjt:  TLALDNYRKACDCGRGAVFFSVAR

CDY15454.1 BnaA08g27380D [Brassica napus]

0.0e+00

72.3

Show/hide

Query:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM
        EGEGS+E +Y  EI     S   S +++IINDI  FVLYMHQQ+PS+LQDMS +FD L  E+ +L + L Q ++K   RRK   R REV+  IK+M+KLM
Subjt:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL
         ++S  ++A++LLI E P +Q V+LILG +PLRPQ  YEL F H   V+R   DF K KA E LS+K IR LIS  AGS S PGP +LF+LV+AP+S NL
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL

Query:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK
        P HF+PKR+FRY++K VPLKLRFKCK Q  +  +   SD    +        ++ + SI +      LS  +   P   +  +    RR+        M 
Subjt:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK

Query:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA
        F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTVHEMEKTL EL++LHDYQV  LG +A
Subjt:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA

Query:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA
        +ILA+GLSSRKNLCVNP+VLA+ENRDSVDA CRK TASWVRA+AAENPNV  C++FE YEKA  +A+LPPGVYTL+DLRAFG  +GWCPYFLARHMVQFA
Subjt:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA

Query:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD
        NV+VYSYQYLLDPKVA IISKE+Q+ESV+VFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TDAGRLRAEYNRL+EGLA RG+L  +D
Subjt:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD

Query:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD
         WL+NPALP+DILKEAVPGNIRRAEHF+HVLRRL+QYLEGRLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYDRLHSLMMTLEITDTDEFL IQT+CD
Subjt:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD

Query:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL
        FATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLL+FNPVVSRSF MS+TRDCICPMVLTRGSDQL
Subjt:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL

Query:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR
        PVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEI Q KLVF ETQDVVETTLALDNYR+ACDCGRGAVFFSVAR
Subjt:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR

KAG6434985.1 hypothetical protein SASPL_106632 [Salvia splendens]

0.0e+00

70.42

Show/hide

Query:  EGEGSSEMEYTEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKAS-SRRKHTGRMREVRQGIKRMEKLM
        E  GSS++EYT I+AA D+ D S +++++ DI  F+L+MHQQ+PS+LQD++ EFD L  E+KEL  ELA++E KA   RRK   R REV+ GI+R+EKLM
Subjt:  EGEGSSEMEYTEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKAS-SRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL
          +S  +AA++LL++E PNI ++ L+LG +PLRP +++EL F + +  + G   F + K  E LSRKAIR +ISK  GS SYPGPTKLFLLVKAPS  NL
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL

Query:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKASDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSE--NLPAAAVVAAALVLRRK-----------
        PLHF+PKREFR ++K  P +LRF+C+ Q  +M  + + +   +S  L +S   D IC+     +L   +E  N+    +   +   R+            
Subjt:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKASDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSE--NLPAAAVVAAALVLRRK-----------

Query:  LVTGGASTMKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHD
          +   + MKFQ+ED+TVYFPYD+IYPEQY+YMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSY L+KP NPVKL+YCTRTVHEMEKTLAELR LHD
Subjt:  LVTGGASTMKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHD

Query:  YQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPY
        +QV++LGP A+ILA+GLSSRKNLCVNPRV+++ENRDSVDA CRKLTASWVR  A ENPNVP C+FFE YEKA S AVLPPGVYTLQDLRAFG +KGWCPY
Subjt:  YQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPY

Query:  FLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIE---------------------
        FLAR MVQFANVVVYSYQYLLDPKVA IISKEMQRE+VVVFDEAHNIDNVCIEALSV+VR QT++GA RNL++M QEIE                     
Subjt:  FLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIE---------------------

Query:  ---RFKETDAGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGID
           R K TDAGRLRAEYNRLV+GLAQRG+LP  +TWL+NPALPDDILKEAVPGNIRRAEHF+ VLRR VQYL+GR+ TENVEKEG VTFV SI SQ GID
Subjt:  ---RFKETDAGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGID

Query:  QKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYP
        QK LKFCYDRLHSLM+TLEITDTDEFLHIQTICD ATLVGTY RGFSIIIEP DERMPHIPDPVLQL CHDASLAIKPVFERFQSVVITSGTLSPIDLYP
Subjt:  QKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYP

Query:  RLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVF
        RLLNFNPVVSRSFT+SLTRDCICPMVLTRGSDQLPVSTK+D+RSD GV +NYG+LLLEM S VPDGIVCFFVSYSYMDGIVNSW+E+GILKEIM+HKLVF
Subjt:  RLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVF

Query:  IETQDVVETTLALDNYRKACDCGRGAVFFSVAR
        IET DVVETTLALDNYR+ACD GRGAVFFSVAR
Subjt:  IETQDVVETTLALDNYRKACDCGRGAVFFSVAR

VDD08616.1 unnamed protein product [Brassica rapa]

0.0e+00

72.3

Show/hide

Query:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM
        EGEGS+E +Y  +I     S   S +++IINDI  FVLYMHQQ+PS+LQDMS +FD L  E+ +L + L Q ++K   RRK   R REV+  IK+M+KLM
Subjt:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL
         ++S  ++A++LLI E P +Q V+LILG +PLRPQ  YEL F H   V+R   DF K+KA E LS+K IR LIS  AGS S PGP +LF+LV+AP S NL
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL

Query:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK
        P HF+PKR+FRY++K VPLKLRFKCK Q  +  +   SD    +        ++ + SI +      LS  +   P   +  +    RRK        M 
Subjt:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK

Query:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA
        F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTVHEMEKTL EL++LHDYQV  LG +A
Subjt:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA

Query:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA
        +ILA+GLSSRKNLCVNP+VLA+ENRDSVDA CRK TASWVRA+AAENPNV  C++FE YEKA  +A+LPPGVYTL+DLRAFG  +GWCPYFLARHMVQFA
Subjt:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA

Query:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD
        NV+VYSYQYLLDPKVA IISKE+Q+ESV+VFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TDAGRLRAEYNRL+EGLA RG+L  +D
Subjt:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD

Query:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD
         WL+NPALP+DILKEAVPGNIRRAEHF+HVLRRL+QYLEGRLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYDRLHSLMMTLEITDTDEFL IQT+CD
Subjt:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD

Query:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL
        FATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLL+FNPVVSRSF MS+TRDCICPMVLTRGSDQL
Subjt:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL

Query:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR
        PVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEI Q KLVF ETQDVVETTLALDNYR+ACDCGRGAVFFSVAR
Subjt:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR

TrEMBL top hits

e value

%identity

Alignment

A0A078FRD7 General transcription and DNA repair factor IIH helicase subunit XPD

0.0e+00

72.3

Show/hide

Query:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM
        EGEGS+E +Y  EI     S   S +++IINDI  FVLYMHQQ+PS+LQDMS +FD L  E+ +L + L Q ++K   RRK   R REV+  IK+M+KLM
Subjt:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL
         ++S  ++A++LLI E P +Q V+LILG +PLRPQ  YEL F H   V+R   DF K KA E LS+K IR LIS  AGS S PGP +LF+LV+AP+S NL
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL

Query:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK
        P HF+PKR+FRY++K VPLKLRFKCK Q  +  +   SD    +        ++ + SI +      LS  +   P   +  +    RR+        M 
Subjt:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK

Query:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA
        F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTVHEMEKTL EL++LHDYQV  LG +A
Subjt:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA

Query:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA
        +ILA+GLSSRKNLCVNP+VLA+ENRDSVDA CRK TASWVRA+AAENPNV  C++FE YEKA  +A+LPPGVYTL+DLRAFG  +GWCPYFLARHMVQFA
Subjt:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA

Query:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD
        NV+VYSYQYLLDPKVA IISKE+Q+ESV+VFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TDAGRLRAEYNRL+EGLA RG+L  +D
Subjt:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD

Query:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD
         WL+NPALP+DILKEAVPGNIRRAEHF+HVLRRL+QYLEGRLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYDRLHSLMMTLEITDTDEFL IQT+CD
Subjt:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD

Query:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL
        FATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLL+FNPVVSRSF MS+TRDCICPMVLTRGSDQL
Subjt:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL

Query:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR
        PVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEI Q KLVF ETQDVVETTLALDNYR+ACDCGRGAVFFSVAR
Subjt:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR

A0A3P6C0E9 General transcription and DNA repair factor IIH helicase subunit XPD

0.0e+00

72.3

Show/hide

Query:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM
        EGEGS+E +Y  +I     S   S +++IINDI  FVLYMHQQ+PS+LQDMS +FD L  E+ +L + L Q ++K   RRK   R REV+  IK+M+KLM
Subjt:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL
         ++S  ++A++LLI E P +Q V+LILG +PLRPQ  YEL F H   V+R   DF K+KA E LS+K IR LIS  AGS S PGP +LF+LV+AP S NL
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL

Query:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK
        P HF+PKR+FRY++K VPLKLRFKCK Q  +  +   SD    +        ++ + SI +      LS  +   P   +  +    RRK        M 
Subjt:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKA---SDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK

Query:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA
        F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTVHEMEKTL EL++LHDYQV  LG +A
Subjt:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA

Query:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA
        +ILA+GLSSRKNLCVNP+VLA+ENRDSVDA CRK TASWVRA+AAENPNV  C++FE YEKA  +A+LPPGVYTL+DLRAFG  +GWCPYFLARHMVQFA
Subjt:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA

Query:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD
        NV+VYSYQYLLDPKVA IISKE+Q+ESV+VFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TDAGRLRAEYNRL+EGLA RG+L  +D
Subjt:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD

Query:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD
         WL+NPALP+DILKEAVPGNIRRAEHF+HVLRRL+QYLEGRLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYDRLHSLMMTLEITDTDEFL IQT+CD
Subjt:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD

Query:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL
        FATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLL+FNPVVSRSF MS+TRDCICPMVLTRGSDQL
Subjt:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL

Query:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR
        PVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEI Q KLVF ETQDVVETTLALDNYR+ACDCGRGAVFFSVAR
Subjt:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR

A0A4D8Z7Y0 General transcription and DNA repair factor IIH helicase subunit XPD

0.0e+00

68.07

Show/hide

Query:  EGEGSSEMEYTEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKAS-SRRKHTGRMREVRQGIKRMEKLM
        E  GSS++EYT I+AA D+ D S +++++ DI  F+L+MHQQ+PS+LQD++ EFD L  E+KEL  ELA++E KA   RRK   R REV+ GI+R+EKLM
Subjt:  EGEGSSEMEYTEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKAS-SRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL
          +S  +AA++LL++E PNI ++ L+LG +PLRP +++EL F + +  + G   F + K  E LSRKAIR +ISK  GS SYPGPTKLFLLVKAPS  NL
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL

Query:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKASDRESQVGNSNDLTNSSVEDSIC--------SREDEVTLSQ----------TSENLPAAAVVAAAL
        PLHF+PKREFR ++K  P +LRF+C+ Q  +M  + + +   +S  L +S   D IC        S++  V++S            S  L   AV     
Subjt:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKASDRESQVGNSNDLTNSSVEDSIC--------SREDEVTLSQ----------TSENLPAAAVVAAAL

Query:  VL--------------------------------RRKL-------VTGGASTMKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGK
        VL                                RR L        +   + MKFQ+ED+TVYFPYD+IYPEQY+YMLELKRALDAKGHCLLEMPTGTGK
Subjt:  VL--------------------------------RRKL-------VTGGASTMKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGK

Query:  TIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAE
        TIALLSLITSY L+KP NPVKL+YCTRTVHEMEKTLAELR LHD+QV++LGP A+ILA+GLSSRKNLCVNPRV+++ENRDSVDA CRKLTASWVR  A E
Subjt:  TIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAE

Query:  NPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALS
        NPNVP C+FFE YEKA S AVLPPGVYTLQDLRAFG +KGWCPYFLAR MVQFANVVVYSYQYLLDPKVA IISKEMQRE+VVVFDEAHNIDNVCIEALS
Subjt:  NPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALS

Query:  VSVRRQTIEGARRNLNKMRQEIE------------------------RFKETDAGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIR
        V+VR QT++GA RNL++M QEIE                        R K TDAGRLRAEYNRLV+GLAQRG+LP  +TWL+NPALPDDILKEAVPGNIR
Subjt:  VSVRRQTIEGARRNLNKMRQEIE------------------------RFKETDAGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIR

Query:  RAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDER
        RAEHF+ VLRR VQYL+GR+ TENVEKEG VTFV SI SQ GIDQK LKFCYDRLHSLM+TLEITDTDEFLHIQTICD ATLVGTY RGFSIIIEP DER
Subjt:  RAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDER

Query:  MPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLL
        MPHIPDPVLQL CHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFT+SLTRDCICPMVLTRGSDQLPVSTK+D+RSD GV +NYG+LL
Subjt:  MPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLL

Query:  LEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR
        LEM S VPDGIVCFFVSYSYMDGIVNSW+E+GILKEIM+HKLVFIET DVVETTLALDNYR+ACD GRGAVFFSVAR
Subjt:  LEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR

A0A5A7V6V2 General transcription and DNA repair factor IIH helicase subunit XPD

0.0e+00

Show/hide

Query:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP
        MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP
Subjt:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP

Query:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ
        RAQILAVGLSSRKNLCVNP+VLASE+RDSVDAGCRKLTASWVRAMAAENPNVP+CEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ
Subjt:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ

Query:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI
        FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI
Subjt:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI

Query:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI
        SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDT+NVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLM+TLEITDTDEFLH+QTI
Subjt:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI

Query:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD
        CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD
Subjt:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD

Query:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
        QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
Subjt:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA

Query:  R
        R
Subjt:  R

M4EP04 General transcription and DNA repair factor IIH helicase subunit XPD

0.0e+00

72.19

Show/hide

Query:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM
        EGEGS+E +Y  +I     S   S +++IINDI  FVLYMHQQ+PS+LQDMS +FD L  E+ +L + L Q ++K   RRK   R REV+  IK+M+KLM
Subjt:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL
        +++S  ++A++LLI E P +Q V+LILG +PLRPQ  YEL F H   V+R   DF K+KA E LS+K IR LIS  AGS S PGP +LF+LV+AP S NL
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNL

Query:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKAS---DRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK
        P HF+PKR+FRY++K VPLKLRFKCK Q  +  +    D    +   +    ++ + SI +      LS  +   P   +  +    RRK        M 
Subjt:  PLHFIPKREFRYSKKIVPLKLRFKCKAQIQQMKAS---DRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMK

Query:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA
        F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTVHEMEKTL EL++LHDYQV  LG +A
Subjt:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRA

Query:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA
        +ILA+GLSSRKNLCVNP+VLA+ENRDSVDA CRK TASWVRA+AAENPNV  C++FE YEKA  +A+LPPGVYTL+DLRAFG  +GWCPYFLARHMVQFA
Subjt:  QILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFA

Query:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD
        NV+VYSYQYLLDPKVA IISKE+Q+ESV+VFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TDAGRLRAEYNRL+EGLA RG+L  +D
Subjt:  NVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISD

Query:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD
         WL+NPALP+DILKEAVPGNIRRAEHF+HVLRRL+QYLEGRLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYDRLHSLMMTLEITDTDEFL IQT+CD
Subjt:  TWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICD

Query:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL
        FATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLL+FNPVVSRSF MS+TRDCICPMVLTRGSDQL
Subjt:  FATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQL

Query:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR
        PVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEI Q KLVF ETQDVVETTLALDNYR+ACDCGRGAVFFSVAR
Subjt:  PVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVAR

SwissProt top hits

e value

%identity

Alignment

A6QLJ0 General transcription and DNA repair factor IIH helicase subunit XPD

2.3e-197

54.58

Show/hide

Query:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP
        MK  ++ + VYFPYD+IYPEQ++YMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y  + P    KLIYC+RTV E+EK + ELR L  +  +Q G 
Subjt:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP

Query:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ
        +   L + LSSRKNLC++P V        VD  C  LTAS+VRA    + ++P C F+E+++  G    LP G+Y L DL+A G ++GWCPYFLAR+ + 
Subjt:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ

Query:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI
         ANVVVYSY YLLDPK+A ++SKE+ R++VVVFDEAHNIDNVCI+++SV++ R+T++  + NL  +++ + R KETD  RLR EY RLVEGL +      
Subjt:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI

Query:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI
        +D  L+NP LPD++LKEAVPG+IR AEHF+  LRRL++Y++ RL  ++V +E    F+  +  +  I +K L+FC +RL SL+ TLEI+D  +F  +  +
Subjt:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI

Query:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD
         +FATLV TYA+GF+IIIEP D+R P I +P+L  SC DASLAIKPVFERFQSV+ITSGTLSP+D+YP++L+F+PV   +FTM+L R C+CPM++ RG+D
Subjt:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD

Query:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
        Q+ +S+KF+ R D+ V+RNYG LLLEM + VPDGIV FF SY YM+  V SW E GIL+ I ++KL+FIETQD  ET++AL+ Y++AC+ GRGA+  SVA
Subjt:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA

Query:  R
        R
Subjt:  R

O08811 General transcription and DNA repair factor IIH helicase subunit XPD

3.1e-197

54.74

Show/hide

Query:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP
        MK  ++ + VYFPYD+IYPEQ++YMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y  + P    KLIYC+RTV E+EK + ELR L  +  QQ G 
Subjt:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP

Query:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ
        +   L + LSSRKNLC++P V        VD  C  LTAS+VRA   ++ ++P C F+E+++  G    LP G+Y L DL+A G ++GWCPYFLAR+ + 
Subjt:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ

Query:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI
         ANVVVYSY YLLDPK+A ++SKE+ R++VVVFDEAHNIDNVCI+++SV++ R+T++  + NL+ +++ + R KETD  RLR EY RLVEGL +      
Subjt:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI

Query:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI
        +D  L+NP LPD++L+EAVPG+IR AEHF+  LRRL++Y++ RL  ++V +E    F+  +  +  I +K L+FC +RL SL+ TLEI D  +F  +  +
Subjt:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI

Query:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD
         +FATLV TYA+GF+IIIEP D+R P I +PVL  SC DASLAIKPVFERFQSV+ITSGTLSP+D+YP++L+F+PV   +FTM+L R C+CPM++ RG+D
Subjt:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD

Query:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
        Q+ +S+KF+ R D+ V+RNYG LLLEM + VPDGIV FF SY YM+  V SW E GIL+ I ++KL+FIETQD  ET++AL+ Y++AC+ GRGA+  SVA
Subjt:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA

Query:  R
        R
Subjt:  R

P18074 General transcription and DNA repair factor IIH helicase subunit XPD

1.5e-196

54.41

Show/hide

Query:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP
        MK  ++ + VYFPYD+IYPEQ++YM ELKR LDAKGH +LEMP+GTGKT++LL+LI +Y  + P    KLIYC+RTV E+EK + ELR L ++  +Q G 
Subjt:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP

Query:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ
        +   L + LSSRKNLC++P V        VD  C  LTAS+VRA    + ++P C F+E+++  G    LP G+Y L DL+A G ++GWCPYFLAR+ + 
Subjt:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ

Query:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI
         ANVVVYSY YLLDPK+A ++SKE+ R++VVVFDEAHNIDNVCI+++SV++ R+T++  + NL  +++ + R KETD  RLR EY RLVEGL +      
Subjt:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI

Query:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI
        +D  L+NP LPD++L+EAVPG+IR AEHF+  LRRL++Y++ RL  ++V +E    F+  +  +  I +K L+FC +RL SL+ TLEITD  +F  +  +
Subjt:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI

Query:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD
         +FATLV TYA+GF+IIIEP D+R P I +P+L  SC DASLAIKPVFERFQSV+ITSGTLSP+D+YP++L+F+PV   +FTM+L R C+CPM++ RG+D
Subjt:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD

Query:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
        Q+ +S+KF+ R D+ V+RNYG LLLEM + VPDGIV FF SY YM+  V SW E GIL+ I ++KL+FIETQD  ET++AL+ Y++AC+ GRGA+  SVA
Subjt:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA

Query:  R
        R
Subjt:  R

Q60452 General transcription and DNA repair factor IIH helicase subunit XPD

1.8e-197

54.58

Show/hide

Query:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP
        MK  ++ + VYFPYD+IYPEQ++YMLELKR LDAKGH +LEMP+GTGKT++LL+LI +Y  + P    KLIYC+RTV E+EK + ELR L  +  QQ G 
Subjt:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP

Query:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ
        +   L + LSSRKNLC++P V        VD  C  LTAS+VRA   ++ ++P C F+E+++  G    LP G+Y L DL+A G ++GWCPYFLAR+ + 
Subjt:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ

Query:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI
         ANVVVYSY YLLDPK+A ++SKE+ R++VVVFDEAHNIDNVCI+++SV++ R+T++  + NL+ +++ + R KETD  RLR EY RLVEGL +      
Subjt:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI

Query:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI
        +D  L+NP LPD++L+EAVPG+IR AEHF+  LRRL++Y++ RL  ++V +E    F+  +  +  I +K L+FC +RL SL+ TLEI D  +F  +  +
Subjt:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI

Query:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD
         +FATLV TYA+GF+IIIEP D+R P I +P+L  SC DASLAIKPVFERFQSV+ITSGTLSP+D+YP++L+F+PV   +FTM+L R C+CPM++ RG+D
Subjt:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD

Query:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
        Q+ +S+KF+ R D+ V+RNYG LLLEM + VPDGIV FF SY YM+  V SW E GIL+ I ++KL+FIETQD  ET++AL+ Y++AC+ GRGA+  SVA
Subjt:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA

Query:  R
        R
Subjt:  R

Q8W4M7 General transcription and DNA repair factor IIH helicase subunit XPD

1.2e-305

84.86

Show/hide

Query:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP
        M F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTVHEMEKTL EL+LLHDYQV+ LG 
Subjt:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP

Query:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ
        +A+ILA+GLSSRKNLCVN +VLA+ENRDSVDA CRK TASWVRA++ ENPNV  C+FFE YEKA  +A+LPPGVYTL+DLRAFG  +GWCPYFLARHM+Q
Subjt:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ

Query:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI
        FANV+VYSYQYLLDPKVA  ISKE+Q+ESVVVFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TDAGRLRAEYNRLVEGLA RG+L  
Subjt:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI

Query:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI
         D WL+NPALP DILKEAVPGNIRRAEHF+HVLRRL+QYL  RLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYDRL SLM+TLEITDTDEFL IQT+
Subjt:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI

Query:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD
        CDFATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLLNF PVVSRSF MS+TRDCICPMVLTRGSD
Subjt:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD

Query:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
        QLPVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEIMQ KLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Subjt:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA

Query:  R
        R
Subjt:  R

Arabidopsis top hits

e value

%identity

Alignment

AT1G03180.1 unknown protein

1.2e-60

54.15

Show/hide

Query:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM
        EGEG++E  Y  +I     S   S +++IINDI  FVLYMHQQ+PS+LQDMS EF+ L  E+ +L + LA+ ++K   RRK   R REV+  IK++EKLM
Subjt:  EGEGSSEMEY-TEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLM

Query:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGAD-DFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFN
         ++S  ++A++L+I E P IQ+V+LILG +PLRPQ  YEL F  ++  V G + DF K KAAE LS+K IR LIS  AGS SYPGP +LF+LV AP + N
Subjt:  NSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGAD-DFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFN

Query:  LPLHFIPKREFRYSKKIVPLKLRFKCKAQ
        LP HF+PKR+FRY++K VP KLRFKC+ Q
Subjt:  LPLHFIPKREFRYSKKIVPLKLRFKCKAQ

AT1G03180.2 unknown protein

1.9e-48

53.4

Show/hide

Query:  YMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVY
        Y+H  +  +LQDMS EF+ L  E+ +L + LA+ ++K   RRK   R REV+  IK++EKLM ++S  ++A++L+I E P IQ+V+LILG +PLRPQ  Y
Subjt:  YMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKLLISETPNIQEVLLILGATPLRPQYVY

Query:  ELCFLHKKVVVRGAD-DFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSKKIVPLKLRFKCKAQ
        EL F  ++  V G + DF K KAAE LS+K IR LIS  AGS SYPGP +LF+LV AP + NLP HF+PKR+FRY++K VP KLRFKC+ Q
Subjt:  ELCFLHKKVVVRGAD-DFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSKKIVPLKLRFKCKAQ

AT1G03190.1 RAD3-like DNA-binding helicase protein

8.3e-307

84.86

Show/hide

Query:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP
        M F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTVHEMEKTL EL+LLHDYQV+ LG 
Subjt:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP

Query:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ
        +A+ILA+GLSSRKNLCVN +VLA+ENRDSVDA CRK TASWVRA++ ENPNV  C+FFE YEKA  +A+LPPGVYTL+DLRAFG  +GWCPYFLARHM+Q
Subjt:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ

Query:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI
        FANV+VYSYQYLLDPKVA  ISKE+Q+ESVVVFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TDAGRLRAEYNRLVEGLA RG+L  
Subjt:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI

Query:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI
         D WL+NPALP DILKEAVPGNIRRAEHF+HVLRRL+QYL  RLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYDRL SLM+TLEITDTDEFL IQT+
Subjt:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI

Query:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD
        CDFATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLLNF PVVSRSF MS+TRDCICPMVLTRGSD
Subjt:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD

Query:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
        QLPVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEIMQ KLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Subjt:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA

Query:  R
        R
Subjt:  R

AT1G03190.2 RAD3-like DNA-binding helicase protein

8.3e-307

84.86

Show/hide

Query:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP
        M F++EDVTVYFPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY LS+P +P+KL+YCTRTVHEMEKTL EL+LLHDYQV+ LG 
Subjt:  MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGP

Query:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ
        +A+ILA+GLSSRKNLCVN +VLA+ENRDSVDA CRK TASWVRA++ ENPNV  C+FFE YEKA  +A+LPPGVYTL+DLRAFG  +GWCPYFLARHM+Q
Subjt:  RAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQ

Query:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI
        FANV+VYSYQYLLDPKVA  ISKE+Q+ESVVVFDEAHNIDNVCIEALSVSVRR T+EGA RNLNK+RQEI+RFK TDAGRLRAEYNRLVEGLA RG+L  
Subjt:  FANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPI

Query:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI
         D WL+NPALP DILKEAVPGNIRRAEHF+HVLRRL+QYL  RLDTENVEKE  V+FV S+ SQAGI+QKTLKFCYDRL SLM+TLEITDTDEFL IQT+
Subjt:  SDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTI

Query:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD
        CDFATLVGTYARGFSIIIEP DERMPHIPDP+LQLSCHDASLAIKPVF+RFQSVVITSGTLSPIDLYPRLLNF PVVSRSF MS+TRDCICPMVLTRGSD
Subjt:  CDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSD

Query:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
        QLPVSTKFDMRSD GVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+ +WNETGILKEIMQ KLVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVA
Subjt:  QLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA

Query:  R
        R
Subjt:  R

AT1G20720.1 RAD3-like DNA-binding helicase protein

1.7e-25

22.5

Show/hide

Query:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALD---AKGHC--LLEMPTGTGKTIALLSLITSYA-------------------------------------
        +Q+  + V FPY   Y  Q A+M  +   LD     GHC  LLE PTGTGK+++LL  + ++                                      
Subjt:  FQLEDVTVYFPYDHIYPEQYAYMLELKRALD---AKGHC--LLEMPTGTGKTIALLSLITSYA-------------------------------------

Query:  ---------LSKPQNPVKLIYCTRTVHEMEKTLAEL-RLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENP
                 + K +   K      T++   +T +++ +++ +Y  ++ G R  +    L+SRK+ C N  VL    +D+VD  CR L         +E  
Subjt:  ---------LSKPQNPVKLIYCTRTVHEMEKTLAEL-RLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAMAAENP

Query:  NVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVS
        NV         +  G +      V+ ++DL   G     CPYF +  M + A +V   Y Y+++P + + +  ++ + ++++FDEAHN++++  EA S++
Subjt:  NVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVS

Query:  VRRQTIEGARRNLNKMR----QEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDT
        +   T+   +  L +M        +   E   G L +   R  + LA+R       +W       D  L+E    NI R E F  +L    + +     +
Subjt:  VRRQTIEGARRNLNKMR----QEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDT

Query:  ENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKP
        +  E E  + ++      +GI   TL+  +  L            D  L +Q         GT+   FS                   L C + ++  K 
Subjt:  ENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKP

Query:  VFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPM-------VLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFF
        + +   SV++TSGTLSP++      +F+  +   F  SL    +           ++ G    P++  +            G+ L E+ + VP G + FF
Subjt:  VFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPM-------VLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFF

Query:  VSYSYMDGIVNSWNETGILKEIMQHKLVFIE
         SY  M+ +   W ET     +   K +F+E
Subjt:  VSYSYMDGIVNSWNETGILKEIMQHKLVFIE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGGAGAAGGCAGCTCAGAGATGGAGTATACGGAGATCGAAGCCGCCGTCGACTCCTTCGATAGCTCCATACTGTACAATATCATCAACGATATCTCCGCCTTCGT
CTTGTACATGCACCAGCAAGTCCCTTCAATCCTACAAGATATGAGCTTTGAATTTGATACTTTGCATGAAGAATACAAAGAGCTGGGAAGTGAATTGGCACAAAATGAAC
TAAAAGCATCATCACGAAGAAAGCATACTGGCAGAATGAGGGAGGTCAGACAGGGAATTAAGAGAATGGAGAAGTTAATGAATTCAGTCTCTGGTTTTCAAGCTGCCATC
AAATTGTTGATTAGCGAGACTCCTAACATCCAGGAAGTCTTATTAATTCTTGGAGCAACCCCACTACGACCTCAATATGTTTATGAGCTGTGCTTTTTACATAAAAAGGT
TGTGGTGAGAGGTGCAGATGACTTCGTCAAACACAAAGCAGCAGAAGTTCTTTCAAGAAAGGCTATTCGAACATTAATCTCGAAGGATGCTGGCTCTGCCTCGTATCCAG
GCCCTACTAAGTTGTTTCTATTGGTGAAGGCCCCTTCTTCTTTCAATCTGCCATTGCACTTCATTCCAAAACGTGAGTTCCGATACAGCAAGAAGATAGTGCCTTTGAAA
CTACGGTTTAAGTGCAAAGCCCAAATCCAGCAGATGAAAGCTTCTGACCGTGAATCTCAAGTTGGAAACTCCAACGACTTAACCAACTCTTCAGTAGAAGATTCAATCTG
TTCGCGTGAAGACGAAGTCACCCTCAGCCAGACCTCTGAAAATCTCCCTGCCGCCGCCGTCGTCGCCGCCGCTCTGGTTCTCCGTCGTAAGCTCGTCACCGGCGGAGCAA
GCACCATGAAGTTCCAATTGGAGGATGTCACAGTCTACTTCCCTTACGATCACATTTACCCGGAACAGTACGCTTACATGCTCGAGCTGAAGCGAGCTCTCGACGCCAAG
GGCCATTGTCTTCTCGAGATGCCCACGGGCACTGGCAAAACCATCGCTCTTCTTTCCCTCATCACCAGCTACGCCCTCTCCAAGCCCCAAAACCCCGTCAAGCTCATCTA
CTGCACTCGCACTGTCCACGAAATGGAGAAGACCCTTGCCGAGCTTAGATTGCTCCATGATTACCAGGTTCAGCAGCTTGGCCCTCGCGCTCAGATCTTGGCTGTGGGGC
TTTCGTCCAGGAAGAATCTGTGTGTCAATCCGAGGGTTTTGGCGTCGGAGAATCGGGATTCTGTCGACGCCGGTTGCCGCAAGCTGACGGCGAGTTGGGTTAGGGCCATG
GCGGCGGAGAATCCAAATGTGCCTAGTTGTGAGTTCTTTGAGCAGTATGAGAAGGCGGGTTCCAGTGCGGTGTTGCCTCCGGGGGTTTATACGTTGCAGGATCTGAGAGC
TTTTGGGACAAAGAAGGGTTGGTGTCCTTACTTCTTGGCACGGCATATGGTACAGTTTGCAAACGTGGTAGTATATAGTTATCAATACTTGCTTGATCCCAAAGTGGCTA
GCATTATATCCAAGGAAATGCAGCGAGAGTCTGTTGTGGTGTTTGATGAGGCACACAATATTGATAACGTGTGTATTGAAGCTCTTAGTGTTAGTGTGAGGAGGCAGACA
ATTGAAGGTGCCAGAAGAAATCTCAATAAGATGCGCCAGGAGATTGAGAGGTTCAAGGAAACTGATGCAGGTAGACTGCGTGCAGAATATAACAGGCTGGTTGAGGGTTT
GGCACAAAGAGGAAACCTACCTATCTCGGATACTTGGCTCTCAAACCCTGCCCTTCCAGATGATATTTTGAAGGAGGCTGTACCAGGAAATATACGCCGAGCCGAACACT
TTATACATGTACTGCGGAGATTGGTTCAGTATCTTGAGGGACGTTTGGACACTGAAAATGTTGAGAAGGAAGGGCTGGTTACTTTTGTTGGCTCTATTGGTTCACAAGCT
GGAATTGACCAAAAAACCCTGAAGTTCTGTTATGATCGTCTCCACTCCCTCATGATGACACTTGAAATTACTGACACAGATGAGTTTTTGCATATACAGACCATATGTGA
CTTTGCAACACTTGTTGGGACATATGCACGAGGTTTCTCAATTATAATCGAACCTGTTGATGAGAGAATGCCTCATATTCCTGACCCTGTTCTGCAGCTTAGCTGTCATG
ATGCCTCACTTGCTATTAAGCCTGTGTTTGAACGATTTCAATCAGTTGTAATTACATCTGGAACTCTGAGCCCAATTGATCTCTACCCTCGATTGCTCAATTTTAATCCT
GTTGTTAGCAGAAGTTTTACAATGTCCTTGACCAGAGACTGCATATGCCCAATGGTTCTTACTCGTGGCAGTGATCAGCTTCCAGTTAGTACTAAATTTGATATGAGAAG
CGACCTTGGTGTAGTAAGGAATTATGGCAGGCTCTTGCTTGAGATGGTCTCAGCAGTTCCTGACGGAATAGTATGTTTCTTCGTCAGTTACTCATATATGGATGGGATTG
TAAACAGTTGGAATGAAACTGGCATATTAAAGGAAATAATGCAGCATAAACTTGTGTTCATTGAAACCCAAGATGTGGTGGAGACTACACTGGCTCTTGACAATTACCGC
AAGGCTTGTGATTGTGGGAGAGGTGCTGTATTTTTTTCCGTAGCCAGATGGGTGGGGGATAGACCCTTTTGCGTTACCTTTCCTCGGCTCTATCATCTTTCTTCTATGAA
AAATCATTCCGTGGCCGAGGTTCTGATTCATTCAGGGAACTCTCTTTCTTATTGCTTTGGCTTTGCGCGTCCGTTGTCTGATCGTGAAACAACGGACCTCGTGACTCTCC
TTTCTCTGATTGGGGAAATCGCTTTTAGTACCACTAGGAAAGACATTCGAGTCTGGAGTCCCGACCCTTCCCTCAGGTTTTCTTGTCATTCCTTCTTCCGATGCCTTTTG
GACCCTGTTTCCTCTGAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAGAAGGTGCATTTTTTTATTTGGCAGGTGATTCATGGAAGAGTTAATACTCT
TGATCGGCTGTCCAGAAAGATTCCTAGTTTGTTTGGGCCTTTTTGTTGCATTCTTTGTCGGATGGCGGAGGAAGACCTCGATCATATGTTATGGAACTGCGCTTTTGCTA
GGACAGTGTGGGATGAGTTCTTTGGTTCGTTCGGGTTGCAGTTTGCCAGACAAAGAGGCCTCAGAGAGATGATCGAAGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAA
GGAAAGTTTTTGTGGCAAGCAGGGATTTGTGCTATTATTTGGGGGTTGTGGGAGTGCGTTGCTGTGATTTTCTGGTCTTGGGGAGTATTGTTAGTTAGAGGATTTGTGGT
GACTGATGAGGTGTTGTTGGAGGGAGAGCTAACTTTGCTAGGGATGGTGGGCAAGATGGAAATGAGGGTAAACGTTTTGGAAGAGAAGTTTGCAGCGATGCAAGTAGGAG
TAGAGGAGGAGATTGATTGGAAGTTTGTAGCGATACAGATGGTTGTGGAGGAGAAATTGATTGACAGCTATCTCAGTTCTGGAATTGATTTGATCTGTTTTGCAATCTTT
GGTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEGEGSSEMEYTEIEAAVDSFDSSILYNIINDISAFVLYMHQQVPSILQDMSFEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAI
KLLISETPNIQEVLLILGATPLRPQYVYELCFLHKKVVVRGADDFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSKKIVPLK
LRFKCKAQIQQMKASDRESQVGNSNDLTNSSVEDSICSREDEVTLSQTSENLPAAAVVAAALVLRRKLVTGGASTMKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAK
GHCLLEMPTGTGKTIALLSLITSYALSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPRVLASENRDSVDAGCRKLTASWVRAM
AAENPNVPSCEFFEQYEKAGSSAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRRQT
IEGARRNLNKMRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQA
GIDQKTLKFCYDRLHSLMMTLEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNP
VVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHKLVFIETQDVVETTLALDNYR
KACDCGRGAVFFSVARWVGDRPFCVTFPRLYHLSSMKNHSVAEVLIHSGNSLSYCFGFARPLSDRETTDLVTLLSLIGEIAFSTTRKDIRVWSPDPSLRFSCHSFFRCLL
DPVSSEPSIFSLLWKVKVPKKVHFFIWQVIHGRVNTLDRLSRKIPSLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARQRGLREMIEEFLPHPPFREQ
GKFLWQAGICAIIWGLWECVAVIFWSWGVLLVRGFVVTDEVLLEGELTLLGMVGKMEMRVNVLEEKFAAMQVGVEEEIDWKFVAIQMVVEEKLIDSYLSSGIDLICFAIF
G

Lag0002423 (gene) of Sponge gourd (AG-4) v1 genome