; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002437 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002437
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:42877394..42878008
RNA-Seq ExpressionLag0002437
SyntenyLag0002437
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057596.1 hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa]3.2e-4347.11Show/hide
Query:  MAANEGVVSVDIDIEQELVKISGKPNLDPSIILKTIAKSGKLAQFRTMENTA---------------------ATAAETAAVSIDSNH--QNTNSGNSDD
        MA+NEGV SV+++I+  LVKISG+ N DPSI +KTIAK+GK AQF   EN+A                      T+A  A     S H  +N NS NS++
Subjt:  MAANEGVVSVDIDIEQELVKISGKPNLDPSIILKTIAKSGKLAQFRTMENTA---------------------ATAAETAAVSIDSNH--QNTNSGNSDD

Query:  HCNKIYRTENC-SSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGSVGGSGRRGFWRRMLEPL-----PLPPPPSMPP
        HC K  RT +  +S +G+FSD    S  VHINEAA+VNPPV LP   R FMR         PP Q+G +   G  GFW  M EP      P PP  +M P
Subjt:  HCNKIYRTENC-SSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGSVGGSGRRGFWRRMLEPL-----PLPPPPSMPP

Query:  AHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV
         H Y+RW EP+PYY Q+Q PP+ N P HYLFNDEN +GCV++
Subjt:  AHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV

KAG6593135.1 hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4149.77Show/hide
Query:  MAANEGVVSVDIDIEQELVKISGKPNLDPSIILKTIAKSGKLAQFRTMENTAATAAETAAVSIDSNHQNTNSGNSDDHCNKIYRTENCSSCSGHFSDRPR
        MAANE V SV IDI++ LV I+     DP  I++ ++++GKLA+ + M   A   A +AAV  DS H N  S  SD HCNKI  T+NC            
Subjt:  MAANEGVVSVDIDIEQELVKISGKPNLDPSIILKTIAKSGKLAQFRTMENTAATAAETAAVSIDSNHQNTNSGNSDDHCNKIYRTENCSSCSGHFSDRPR

Query:  SSGDVHINEAASVNPPVALPHAYRPFMRPPSQFGSVGGSGRRGFWRRMLEPL--PLPP------PPSMPPAHRYHRWSEPLPYYYQQQPPP---LENAPG
         S  VH NEAA   PPV +P+ +R  +RP SQFG VG    RGF R M+EPL  PLPP      PP+MPP   Y+RWSEP PYY+QQQPPP   +  APG
Subjt:  SSGDVHINEAASVNPPVALPHAYRPFMRPPSQFGSVGGSGRRGFWRRMLEPL--PLPP------PPSMPPAHRYHRWSEPLPYYYQQQPPP---LENAPG

Query:  HYLFNDENIDGCVMV
        HYLFNDEN+D C ++
Subjt:  HYLFNDENIDGCVMV

KGN45423.2 hypothetical protein Csa_015802, partial [Cucumis sativus]1.9e-2448.26Show/hide
Query:  QFRTMEN-TAATAAETAAVSID--SNH--QNTNSGNSDDHCNKIYRTENCSSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------P
        QF T EN T+A A   AA S D  S H   +++S NS++HC K     + +S +G+FSD       VHINEAASVNPPVALP   R  MR         P
Subjt:  QFRTMEN-TAATAAETAAVSID--SNH--QNTNSGNSDDHCNKIYRTENCSSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------P

Query:  PSQFGS-VGGSGRRGFWRRMLEPLPLPPPPSMPPAHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDG
        P Q+G  +G  G  GFW  M EP   P  P  PP H Y+RW EP+PYY Q+Q PP+ N P HY+FNDEN +G
Subjt:  PSQFGS-VGGSGRRGFWRRMLEPLPLPPPPSMPPAHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDG

TYK20998.1 hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa]7.5e-2948.21Show/hide
Query:  TAAETAAVSIDSNH--QNTNSGNSDDHCNKIYRTENC-SSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGSVGGSGR
        T+A  A     S H  +N NS NS++HC K  RT +  +S +G+FSD    S  VHINEAA+VNPPV LP   R FMR         PP Q+G +   G 
Subjt:  TAAETAAVSIDSNH--QNTNSGNSDDHCNKIYRTENC-SSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGSVGGSGR

Query:  RGFWRRMLEPL-----PLPPPPSMPPAHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV
         GFW  M EP      P PP  +M P H Y+RW EP+PYY Q+Q PP+ N P HYLFNDEN +GCV++
Subjt:  RGFWRRMLEPL-----PLPPPPSMPPAHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV

TrEMBL top hitse value%identityAlignment
A0A0A0K5U2 Uncharacterized protein4.6e-4047.68Show/hide
Query:  MAANEGVVSVDIDIEQELVKISGKPNLDPSIILKTIAKSGKLAQFRTMENTA-------------------ATAAETAAVSID--SNH--QNTNSGNSDD
        MA+NEGV SV+++IE  LVKISG+ N DP I LKTI K+GK AQF  M+NTA                   A A   AA S D  S H   +++S NS++
Subjt:  MAANEGVVSVDIDIEQELVKISGKPNLDPSIILKTIAKSGKLAQFRTMENTA-------------------ATAAETAAVSID--SNH--QNTNSGNSDD

Query:  HCNKIYRTENCSSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGS-VGGSGRRGFWRRMLEPLPLPPPPSMPPAHRYH
        HC K     + +S +G+FSD       VHINEAASVNPPVALP   R  MR         PP Q+G  +G  G  GFW  M EP   P  P  PP H Y+
Subjt:  HCNKIYRTENCSSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGS-VGGSGRRGFWRRMLEPLPLPPPPSMPPAHRYH

Query:  RWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV
        RW EP+PYY Q+Q PP+ N P HY+FNDEN +GC++V
Subjt:  RWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV

A0A5A7UTY4 Uncharacterized protein1.5e-4347.11Show/hide
Query:  MAANEGVVSVDIDIEQELVKISGKPNLDPSIILKTIAKSGKLAQFRTMENTA---------------------ATAAETAAVSIDSNH--QNTNSGNSDD
        MA+NEGV SV+++I+  LVKISG+ N DPSI +KTIAK+GK AQF   EN+A                      T+A  A     S H  +N NS NS++
Subjt:  MAANEGVVSVDIDIEQELVKISGKPNLDPSIILKTIAKSGKLAQFRTMENTA---------------------ATAAETAAVSIDSNH--QNTNSGNSDD

Query:  HCNKIYRTENC-SSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGSVGGSGRRGFWRRMLEPL-----PLPPPPSMPP
        HC K  RT +  +S +G+FSD    S  VHINEAA+VNPPV LP   R FMR         PP Q+G +   G  GFW  M EP      P PP  +M P
Subjt:  HCNKIYRTENC-SSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGSVGGSGRRGFWRRMLEPL-----PLPPPPSMPP

Query:  AHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV
         H Y+RW EP+PYY Q+Q PP+ N P HYLFNDEN +GCV++
Subjt:  AHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV

A0A5D3DBX5 Uncharacterized protein3.6e-2948.21Show/hide
Query:  TAAETAAVSIDSNH--QNTNSGNSDDHCNKIYRTENC-SSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGSVGGSGR
        T+A  A     S H  +N NS NS++HC K  RT +  +S +G+FSD    S  VHINEAA+VNPPV LP   R FMR         PP Q+G +   G 
Subjt:  TAAETAAVSIDSNH--QNTNSGNSDDHCNKIYRTENC-SSCSGHFSDRPRSSGDVHINEAASVNPPVALPHAYRPFMR---------PPSQFGSVGGSGR

Query:  RGFWRRMLEPL-----PLPPPPSMPPAHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV
         GFW  M EP      P PP  +M P H Y+RW EP+PYY Q+Q PP+ N P HYLFNDEN +GCV++
Subjt:  RGFWRRMLEPL-----PLPPPPSMPPAHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCAATGAAGGAGTTGTCTCCGTAGACATTGATATAGAGCAAGAATTGGTAAAAATCAGTGGAAAACCCAACTTAGATCCATCAATCATTCTAAAAACAATAGC
AAAATCCGGCAAATTAGCACAGTTTCGAACCATGGAGAATACGGCGGCGACGGCGGCGGAGACGGCAGCCGTTTCCATTGATTCCAATCATCAAAACACTAATTCCGGTA
ATTCAGACGATCACTGCAACAAAATTTACAGGACGGAGAATTGCAGTTCCTGTTCCGGCCACTTTTCCGACCGCCCCCGCTCGTCCGGCGACGTCCATATCAATGAGGCA
GCCAGCGTCAATCCGCCGGTGGCTTTACCACACGCCTACCGGCCGTTTATGCGGCCGCCGTCTCAATTTGGAAGTGTGGGTGGTAGTGGACGCCGTGGTTTTTGGCGTCG
AATGTTGGAGCCATTGCCACTGCCGCCACCGCCGTCGATGCCACCGGCACATAGATATCATCGGTGGTCGGAGCCGTTGCCTTATTATTACCAGCAGCAACCGCCACCGT
TGGAGAATGCACCGGGGCACTACTTGTTCAATGATGAGAATATAGACGGGTGCGTAATGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCCAATGAAGGAGTTGTCTCCGTAGACATTGATATAGAGCAAGAATTGGTAAAAATCAGTGGAAAACCCAACTTAGATCCATCAATCATTCTAAAAACAATAGC
AAAATCCGGCAAATTAGCACAGTTTCGAACCATGGAGAATACGGCGGCGACGGCGGCGGAGACGGCAGCCGTTTCCATTGATTCCAATCATCAAAACACTAATTCCGGTA
ATTCAGACGATCACTGCAACAAAATTTACAGGACGGAGAATTGCAGTTCCTGTTCCGGCCACTTTTCCGACCGCCCCCGCTCGTCCGGCGACGTCCATATCAATGAGGCA
GCCAGCGTCAATCCGCCGGTGGCTTTACCACACGCCTACCGGCCGTTTATGCGGCCGCCGTCTCAATTTGGAAGTGTGGGTGGTAGTGGACGCCGTGGTTTTTGGCGTCG
AATGTTGGAGCCATTGCCACTGCCGCCACCGCCGTCGATGCCACCGGCACATAGATATCATCGGTGGTCGGAGCCGTTGCCTTATTATTACCAGCAGCAACCGCCACCGT
TGGAGAATGCACCGGGGCACTACTTGTTCAATGATGAGAATATAGACGGGTGCGTAATGGTTTAG
Protein sequenceShow/hide protein sequence
MAANEGVVSVDIDIEQELVKISGKPNLDPSIILKTIAKSGKLAQFRTMENTAATAAETAAVSIDSNHQNTNSGNSDDHCNKIYRTENCSSCSGHFSDRPRSSGDVHINEA
ASVNPPVALPHAYRPFMRPPSQFGSVGGSGRRGFWRRMLEPLPLPPPPSMPPAHRYHRWSEPLPYYYQQQPPPLENAPGHYLFNDENIDGCVMV