; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002455 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002455
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmyb-like transcription factor family protein
Genome locationchr4:43038186..43038810
RNA-Seq ExpressionLag0002455
SyntenyLag0002455
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044787 - Myb family transcription factor HRS1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141926.1 transcription factor HHO5 [Cucumis sativus]1.3e-4393.2Show/hide
Query:  MTPISDPFPVNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS
        MTPISDPFPVNLTVKNGG G R GRAAVSGLSSPA Q+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVD LTNDEVKS
Subjt:  MTPISDPFPVNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS

Query:  HLQ
        HLQ
Subjt:  HLQ

XP_008440244.1 PREDICTED: uncharacterized protein LOC103484758 [Cucumis melo]9.7e-4493.2Show/hide
Query:  MTPISDPFPVNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS
        MTPISDPFPVNLTVKNGG G R GRAAVSGLSSPA Q+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVD LTNDEVKS
Subjt:  MTPISDPFPVNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS

Query:  HLQ
        HLQ
Subjt:  HLQ

XP_022133033.1 transcription factor HHO5 [Momordica charantia]1.8e-4292.16Show/hide
Query:  MTPISDPFPVNLTVKNGGGSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSH
        MTPISDPFPVNLTVKN G  RG RAAV GLSSPAAQ+K QTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVD LTNDEVKSH
Subjt:  MTPISDPFPVNLTVKNGGGSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSH

Query:  LQ
        LQ
Subjt:  LQ

XP_023543987.1 myb family transcription factor EFM-like [Cucurbita pepo subsp. pepo]1.2e-3885.71Show/hide
Query:  MTPISDPFP--VNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEV
        MT ISDPFP  VNLTVKNG  G R GRAAVSG SSPA Q+ GQTKLSQQQQTIRKQRRCWSP LHRRF+DALHRLGGSQVATPKQI+ELMQVD LTNDEV
Subjt:  MTPISDPFP--VNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEV

Query:  KSHLQ
        KSHLQ
Subjt:  KSHLQ

XP_038881045.1 transcription factor HHO5 [Benincasa hispida]4.8e-4392.23Show/hide
Query:  MTPISDPFPVNLTVKN-GGGSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS
        MTPISDPFPV+LTVK+ GGG R GRAAVSGLSSPAAQ+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVD LTNDEVKS
Subjt:  MTPISDPFPVNLTVKN-GGGSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS

Query:  HLQ
        HLQ
Subjt:  HLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KIA9 HTH myb-type domain-containing protein6.1e-4493.2Show/hide
Query:  MTPISDPFPVNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS
        MTPISDPFPVNLTVKNGG G R GRAAVSGLSSPA Q+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVD LTNDEVKS
Subjt:  MTPISDPFPVNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS

Query:  HLQ
        HLQ
Subjt:  HLQ

A0A1S3B0P5 uncharacterized protein LOC1034847584.7e-4493.2Show/hide
Query:  MTPISDPFPVNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS
        MTPISDPFPVNLTVKNGG G R GRAAVSGLSSPA Q+KGQ KLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVD LTNDEVKS
Subjt:  MTPISDPFPVNLTVKNGG-GSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKS

Query:  HLQ
        HLQ
Subjt:  HLQ

A0A6J1BXV9 transcription factor HHO58.9e-4392.16Show/hide
Query:  MTPISDPFPVNLTVKNGGGSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSH
        MTPISDPFPVNLTVKN G  RG RAAV GLSSPAAQ+K QTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVD LTNDEVKSH
Subjt:  MTPISDPFPVNLTVKNGGGSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSH

Query:  LQ
        LQ
Subjt:  LQ

A0A6J1GGX4 transcription factor HHO5-like2.3e-3885.71Show/hide
Query:  MTPISDPFP--VNLTVKNGGGS-RGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEV
        MT ISDPFP  VNLTVKNG  S R GRAAVSG SSPA Q+ GQTKLSQQQQTIRKQRRCWSP LHRRF+DALHRLGGSQVATPKQI+ELMQVD LTNDEV
Subjt:  MTPISDPFP--VNLTVKNGGGS-RGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEV

Query:  KSHLQ
        KSHLQ
Subjt:  KSHLQ

A0A6J1KS63 transcription factor HHO5-like1.0e-3885.29Show/hide
Query:  MTPISDPFPVNLTVKNGGGSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSH
        MTPISDPF  NLT+KN G +RG  A+VSGLSSPAAQ+ G  KLSQ QQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVD LTNDEVKSH
Subjt:  MTPISDPFPVNLTVKNGGGSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSH

Query:  LQ
        LQ
Subjt:  LQ

SwissProt top hitse value%identityAlignment
Q5VRW2 Transcription factor NIGTH15.0e-1965.82Show/hide
Query:  RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ
        R A +G   P+    GQ  +    Q  RK RRCWSPELHRRFV+AL  LGG+QVATPKQIRELM+VD LTNDEVKSHLQ
Subjt:  RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ

Q8VZS3 Transcription factor HHO21.1e-1871.21Show/hide
Query:  QTKLSQQQ---QTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ
        + ++ QQQ    T RKQRRCWSPELHRRF++AL +LGGS VATPKQIR+ M+VD LTNDEVKSHLQ
Subjt:  QTKLSQQQ---QTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ

Q9FPE8 Transcription factor HHO31.7e-1968.92Show/hide
Query:  SSPAAQVKGQTKLSQQQQ--TIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ
        SS A  V G  +  +Q+Q  + RKQRRCWSPELHRRF+ AL +LGGS VATPKQIR+LM+VD LTNDEVKSHLQ
Subjt:  SSPAAQVKGQTKLSQQQQ--TIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ

Q9FX84 Transcription factor HHO61.1e-1849.56Show/hide
Query:  SGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQSPDFRDLAGKKIRKLQSVWILSKGS
        + +  P      Q     +QQ +RKQRRCW+PELHRRFVDAL +LGG  VATPKQIRE MQ + LTNDEVKSHLQ           IRK  S        
Subjt:  SGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQSPDFRDLAGKKIRKLQSVWILSKGS

Query:  FLDFTVWISYFTD
         L F +W S   D
Subjt:  FLDFTVWISYFTD

Q9ZQ85 Myb family transcription factor EFM5.0e-1979.66Show/hide
Query:  SQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ
        S   Q+ RK RRCWSP+LHRRFV AL  LGGSQVATPKQIRELM+VD LTNDEVKSHLQ
Subjt:  SQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ

Arabidopsis top hitse value%identityAlignment
AT1G25550.1 myb-like transcription factor family protein1.2e-2068.92Show/hide
Query:  SSPAAQVKGQTKLSQQQQ--TIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ
        SS A  V G  +  +Q+Q  + RKQRRCWSPELHRRF+ AL +LGGS VATPKQIR+LM+VD LTNDEVKSHLQ
Subjt:  SSPAAQVKGQTKLSQQQQ--TIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ

AT1G49560.1 Homeodomain-like superfamily protein8.0e-2049.56Show/hide
Query:  SGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQSPDFRDLAGKKIRKLQSVWILSKGS
        + +  P      Q     +QQ +RKQRRCW+PELHRRFVDAL +LGG  VATPKQIRE MQ + LTNDEVKSHLQ           IRK  S        
Subjt:  SGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQSPDFRDLAGKKIRKLQSVWILSKGS

Query:  FLDFTVWISYFTD
         L F +W S   D
Subjt:  FLDFTVWISYFTD

AT1G68670.1 myb-like transcription factor family protein8.0e-2071.21Show/hide
Query:  QTKLSQQQ---QTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ
        + ++ QQQ    T RKQRRCWSPELHRRF++AL +LGGS VATPKQIR+ M+VD LTNDEVKSHLQ
Subjt:  QTKLSQQQ---QTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ

AT2G03500.1 Homeodomain-like superfamily protein3.6e-2079.66Show/hide
Query:  SQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ
        S   Q+ RK RRCWSP+LHRRFV AL  LGGSQVATPKQIRELM+VD LTNDEVKSHLQ
Subjt:  SQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ

AT4G37180.2 Homeodomain-like superfamily protein6.8e-1976.19Show/hide
Query:  KLSQQQQTIRK--QRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ
        K S Q   I+K  QRR WS ELHR+FVDALHRLGG QVATPKQIR+LM+VD LTNDEVKSHLQ
Subjt:  KLSQQQQTIRK--QRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCCAATCTCCGATCCCTTTCCTGTTAATTTGACCGTCAAGAACGGCGGCGGCAGCCGGGGCGGCAGAGCTGCTGTTTCTGGGTTGTCTTCGCCGGCGGCGCAAGT
GAAAGGACAGACAAAATTGTCCCAACAGCAACAGACCATAAGAAAACAGAGAAGATGTTGGTCGCCGGAGCTCCACCGGCGCTTCGTCGACGCACTGCACCGACTCGGCG
GATCTCAAGTGGCAACACCAAAACAGATAAGGGAATTGATGCAAGTGGACAGCCTCACCAACGACGAAGTGAAAAGCCATTTACAATCGCCGGATTTCAGGGATCTCGCC
GGAAAGAAAATTCGAAAGTTACAGTCGGTTTGGATTTTATCGAAAGGATCTTTCTTAGATTTCACAGTTTGGATCTCATATTTTACCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCCCAATCTCCGATCCCTTTCCTGTTAATTTGACCGTCAAGAACGGCGGCGGCAGCCGGGGCGGCAGAGCTGCTGTTTCTGGGTTGTCTTCGCCGGCGGCGCAAGT
GAAAGGACAGACAAAATTGTCCCAACAGCAACAGACCATAAGAAAACAGAGAAGATGTTGGTCGCCGGAGCTCCACCGGCGCTTCGTCGACGCACTGCACCGACTCGGCG
GATCTCAAGTGGCAACACCAAAACAGATAAGGGAATTGATGCAAGTGGACAGCCTCACCAACGACGAAGTGAAAAGCCATTTACAATCGCCGGATTTCAGGGATCTCGCC
GGAAAGAAAATTCGAAAGTTACAGTCGGTTTGGATTTTATCGAAAGGATCTTTCTTAGATTTCACAGTTTGGATCTCATATTTTACCGATTAA
Protein sequenceShow/hide protein sequence
MTPISDPFPVNLTVKNGGGSRGGRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRRCWSPELHRRFVDALHRLGGSQVATPKQIRELMQVDSLTNDEVKSHLQSPDFRDLA
GKKIRKLQSVWILSKGSFLDFTVWISYFTD