; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002458 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002458
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionABC transporter B family member 6-like
Genome locationchr4:43050421..43053917
RNA-Seq ExpressionLag0002458
SyntenyLag0002458
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578721.1 ABC transporter B family member 20, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4051.72Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        +LALR +YIAIGVFVAGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
                                                      VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
Subjt:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA

Query:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        L LWVGRFLVTH+KAHGGEIITALF VILSGL
Subjt:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL

MBA0629634.1 hypothetical protein [Gossypium davidsonii]5.9e-4258.21Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        QLAL  VYIA GVF AGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ---------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALPLWVGRFLVTHYKAHGGEIITALFGVILSG
                       VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL LWVGRFLVTH++AHGGEIITALF +ILSG
Subjt:  ---------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALPLWVGRFLVTHYKAHGGEIITALFGVILSG

Query:  L
        L
Subjt:  L

XP_022938954.1 ABC transporter B family member 20 isoform X1 [Cucurbita moschata]2.5e-4051.72Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        +LALR +YIAIGVFVAGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
                                                      VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
Subjt:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA

Query:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        L LWVGRFLVTH+KAHGGEIITALF VILSGL
Subjt:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL

XP_023534705.1 ABC transporter B family member 6-like [Cucurbita pepo subsp. pepo]1.9e-4052.16Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        +LALR VYIAIGVFVAGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
                                                      VSYA+TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
Subjt:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA

Query:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        L LWVGRFLVTH KAHGGEIITALF +ILSGL
Subjt:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL

XP_023550201.1 ABC transporter B family member 20 isoform X1 [Cucurbita pepo subsp. pepo]2.5e-4051.72Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        +LALR +YIAIGVFVAGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
                                                      VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
Subjt:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA

Query:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        L LWVGRFLVTH+KAHGGEIITALF VILSGL
Subjt:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL

TrEMBL top hitse value%identityAlignment
A0A6J1BVG5 ABC transporter B family member 20 isoform X12.0e-4052.16Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        +LALR VYIAIGVFVAGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
                                                      VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
Subjt:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA

Query:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        L LWVGRFLVTH KAHGGEIITALF VILSGL
Subjt:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL

A0A6J1FFM1 ABC transporter B family member 20 isoform X11.2e-4051.72Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        +LALR +YIAIGVFVAGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
                                                      VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
Subjt:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA

Query:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        L LWVGRFLVTH+KAHGGEIITALF VILSGL
Subjt:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL

A0A6J1JPG7 ABC transporter B family member 6-like2.7e-4051.72Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        +LALR VYIAIGVFVAGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
                                                      VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
Subjt:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA

Query:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        L LWVGRFLVTH KAHGGEIITALF +ILSGL
Subjt:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL

A0A6J1JUU7 ABC transporter B family member 6 isoform X11.2e-4051.72Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        +LALR +YIAIGVFVAGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
                                                      VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA
Subjt:  ----------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCA

Query:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        L LWVGRFLVTH+KAHGGEIITALF VILSGL
Subjt:  LPLWVGRFLVTHYKAHGGEIITALFGVILSGL

A0A7J8SU53 Uncharacterized protein2.8e-4258.21Show/hide
Query:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------
        QLAL  VYIA GVF AGWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                     
Subjt:  QLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV---------------------

Query:  ---------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALPLWVGRFLVTHYKAHGGEIITALFGVILSG
                       VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL LWVGRFLVTH++AHGGEIITALF +ILSG
Subjt:  ---------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALPLWVGRFLVTHYKAHGGEIITALFGVILSG

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
Q8LPT1 ABC transporter B family member 63.1e-3847.01Show/hide
Query:  MTQLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV-------------------
        + +L+L  VYIA GVF++GWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                   
Subjt:  MTQLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV-------------------

Query:  ------------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS
                                                        VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS
Subjt:  ------------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS

Query:  CALPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        CA+ LW+GRF V H++A+GGEIITALF VILSGL
Subjt:  CALPLWVGRFLVTHYKAHGGEIITALFGVILSGL

Q9LJX0 ABC transporter B family member 198.1e-1029.17Show/hide
Query:  QLALRGVYIAIGVFVAGWIVLLNGDIVNQVLSDVLLIQSALSEKVVSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL
        +LAL  V +  G+  AG +       +     +       ++E+ ++  +T+Y +  E  A  +Y+ ++Q TL+ G    + +GLGLG TYG+A  S AL
Subjt:  QLALRGVYIAIGVFVAGWIVLLNGDIVNQVLSDVLLIQSALSEKVVSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL

Query:  PLWVGRFLVTHYKAHGGEIITALFGVILSGLS--AMFSPLGTLA
          W     + + +  GG+  TA+F  I+ G+S    FS LG  +
Subjt:  PLWVGRFLVTHYKAHGGEIITALFGVILSGLS--AMFSPLGTLA

Q9M3B9 ABC transporter B family member 201.3e-3646.58Show/hide
Query:  MTQLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV-------------------
        + QL+L  VYIA GVF++GWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                   
Subjt:  MTQLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV-------------------

Query:  ------------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS
                                                        +SY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS
Subjt:  ------------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS

Query:  CALPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        CAL LW+GRF V + +A+GGEII ALF VILSGL
Subjt:  CALPLWVGRFLVTHYKAHGGEIITALFGVILSGL

Q9ZR72 ABC transporter B family member 11.7e-0729.55Show/hide
Query:  QLALRGVYIAIGVFVAGWIVLLNGDIVNQVLSDVLLIQSALSEKVVSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL
        QLAL  + +   + V G I       ++    + L     + E+ V   + +  F  E  A  +Y+++L+   + G    L +G+GLG TY +  C  AL
Subjt:  QLALRGVYIAIGVFVAGWIVLLNGDIVNQVLSDVLLIQSALSEKVVSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL

Query:  PLWVGRFLVTHYKAHGGEIITALFGVILSGLS
         LW G +LV H+  +GG  I  +F V++ GL+
Subjt:  PLWVGRFLVTHYKAHGGEIITALFGVILSGLS

Arabidopsis top hitse value%identityAlignment
AT2G36910.1 ATP binding cassette subfamily B11.2e-0829.55Show/hide
Query:  QLALRGVYIAIGVFVAGWIVLLNGDIVNQVLSDVLLIQSALSEKVVSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL
        QLAL  + +   + V G I       ++    + L     + E+ V   + +  F  E  A  +Y+++L+   + G    L +G+GLG TY +  C  AL
Subjt:  QLALRGVYIAIGVFVAGWIVLLNGDIVNQVLSDVLLIQSALSEKVVSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL

Query:  PLWVGRFLVTHYKAHGGEIITALFGVILSGLS
         LW G +LV H+  +GG  I  +F V++ GL+
Subjt:  PLWVGRFLVTHYKAHGGEIITALFGVILSGLS

AT2G39480.1 P-glycoprotein 62.2e-3947.01Show/hide
Query:  MTQLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV-------------------
        + +L+L  VYIA GVF++GWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                   
Subjt:  MTQLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV-------------------

Query:  ------------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS
                                                        VSY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS
Subjt:  ------------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS

Query:  CALPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        CA+ LW+GRF V H++A+GGEIITALF VILSGL
Subjt:  CALPLWVGRFLVTHYKAHGGEIITALFGVILSGL

AT3G28860.1 ATP binding cassette subfamily B195.7e-1129.17Show/hide
Query:  QLALRGVYIAIGVFVAGWIVLLNGDIVNQVLSDVLLIQSALSEKVVSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL
        +LAL  V +  G+  AG +       +     +       ++E+ ++  +T+Y +  E  A  +Y+ ++Q TL+ G    + +GLGLG TYG+A  S AL
Subjt:  QLALRGVYIAIGVFVAGWIVLLNGDIVNQVLSDVLLIQSALSEKVVSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCAL

Query:  PLWVGRFLVTHYKAHGGEIITALFGVILSGLS--AMFSPLGTLA
          W     + + +  GG+  TA+F  I+ G+S    FS LG  +
Subjt:  PLWVGRFLVTHYKAHGGEIITALFGVILSGLS--AMFSPLGTLA

AT3G55320.1 P-glycoprotein 209.4e-3846.58Show/hide
Query:  MTQLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV-------------------
        + QL+L  VYIA GVF++GWI                      VLL            NGDIV+QVLSDVLLIQSALSEKV                   
Subjt:  MTQLALRGVYIAIGVFVAGWI----------------------VLL------------NGDIVNQVLSDVLLIQSALSEKV-------------------

Query:  ------------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS
                                                        +SY +TLY FTNE LAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS
Subjt:  ------------------------------------------------VSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICS

Query:  CALPLWVGRFLVTHYKAHGGEIITALFGVILSGL
        CAL LW+GRF V + +A+GGEII ALF VILSGL
Subjt:  CALPLWVGRFLVTHYKAHGGEIITALFGVILSGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACATACGTTTATTAGCTCTCTTGAGGAAGGATATGACACAGCTTGCTTTAAGAGGAGTTTATATTGCTATTGGTGTTTTCGTTGCTGGTTGGATTGTGCTACTTAA
TGGGGATATTGTGAACCAAGTACTGAGTGATGTGCTGCTCATTCAATCTGCTCTTAGTGAAAAAGTCGTCTCTTATGCCAAAACGTTGTATCCTTTCACGAATGAAATAT
TAGCCAAGTATTCTTATGCAACATCATTGCAAGCAACTCTGAGATATGGTATATTGATAAGCCTTGTGCAAGGTCTTGGGCTTGGATTCACATATGGGCTTGCAATATGT
TCCTGTGCTTTACCACTTTGGGTTGGAAGGTTCTTGGTCACACATTACAAAGCTCATGGAGGAGAGATTATAACAGCACTATTTGGTGTAATTTTAAGTGGCCTGTCTGC
TATGTTTTCTCCACTTGGGACTCTAGCATGGGTGGCGCCTCATTCTCACTCTAATTACATTTTTGGAAATGTTGTAGCACAAGGTATTGTTGTAGCACAAGCCAAACACG
CATTCCCTGTTGATAATGGCCTCCGTCTGCCTCCCCTTCCTTTGTTCTCCATCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACATACGTTTATTAGCTCTCTTGAGGAAGGATATGACACAGCTTGCTTTAAGAGGAGTTTATATTGCTATTGGTGTTTTCGTTGCTGGTTGGATTGTGCTACTTAA
TGGGGATATTGTGAACCAAGTACTGAGTGATGTGCTGCTCATTCAATCTGCTCTTAGTGAAAAAGTCGTCTCTTATGCCAAAACGTTGTATCCTTTCACGAATGAAATAT
TAGCCAAGTATTCTTATGCAACATCATTGCAAGCAACTCTGAGATATGGTATATTGATAAGCCTTGTGCAAGGTCTTGGGCTTGGATTCACATATGGGCTTGCAATATGT
TCCTGTGCTTTACCACTTTGGGTTGGAAGGTTCTTGGTCACACATTACAAAGCTCATGGAGGAGAGATTATAACAGCACTATTTGGTGTAATTTTAAGTGGCCTGTCTGC
TATGTTTTCTCCACTTGGGACTCTAGCATGGGTGGCGCCTCATTCTCACTCTAATTACATTTTTGGAAATGTTGTAGCACAAGGTATTGTTGTAGCACAAGCCAAACACG
CATTCCCTGTTGATAATGGCCTCCGTCTGCCTCCCCTTCCTTTGTTCTCCATCTTTTAG
Protein sequenceShow/hide protein sequence
MHIRLLALLRKDMTQLALRGVYIAIGVFVAGWIVLLNGDIVNQVLSDVLLIQSALSEKVVSYAKTLYPFTNEILAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAIC
SCALPLWVGRFLVTHYKAHGGEIITALFGVILSGLSAMFSPLGTLAWVAPHSHSNYIFGNVVAQGIVVAQAKHAFPVDNGLRLPPLPLFSIF