; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002481 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002481
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionclassical arabinogalactan protein 26
Genome locationchr4:43240730..43241140
RNA-Seq ExpressionLag0002481
SyntenyLag0002481
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039346 - Classical arabinogalactan protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575865.1 hypothetical protein SDJN03_26504, partial [Cucurbita argyrosperma subsp. sororia]5.7e-4982.35Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP
        MAS+FSLYIPIFMAYTASI PFSFASYPN+FPPL+SSISAAPEFSPSPSPSP+SDI PLFP+PGGA L PSSLPTIPSSPSPPNPD   AAPAPE+PLPP
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP

Query:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        SQSLPFSAAA L+SG WCW + VALTA +  AE+CR
Subjt:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

XP_022953817.1 classical arabinogalactan protein 26 [Cucurbita moschata]5.7e-4982.35Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP
        MAS+FSLYIPIFMAYTASI PFSFASYPN+FPPL+SSISAAPEFSPSPSPSP+SDI PLFP+PGGA L PSSLPTIPSSPSPPNPD   AAPAPE+PLPP
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP

Query:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        SQSLPFSAAA L+SG WCW + VALTA +  AE+CR
Subjt:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

XP_022991733.1 classical arabinogalactan protein 26 [Cucurbita maxima]1.1e-4780.88Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP
        MAS+FSLYIPIFMAYTASIF FSFASYPN+FPPL+SSISAAPEFSPSPSPSP+SDI PLFP+PGGA L PSSLPTIPSSPSPPNPD   A PAPE+PLPP
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP

Query:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        SQSLPFSAAA L+SG WCW + VALTA +   E+CR
Subjt:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

XP_023548939.1 classical arabinogalactan protein 26-like [Cucurbita pepo subsp. pepo]3.3e-4982.35Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP
        MAS+FSLYIPIFMAYTASIFPFSFASYPN+FPPL+SSISAAPEFSPSPSPSP+SDI PLFP+PGGA L PSSLPTIPSSPSPPNPD   AAPAPE+PLPP
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP

Query:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        SQSLPFSA A L+SG WCW + VALTA +  AE+CR
Subjt:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

XP_038876736.1 classical arabinogalactan protein 26-like [Benincasa hispida]2.5e-4478.99Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFS--PSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPL
        MAS+FSLYIPIFMAYTASI PFS ASYPNY P L+SSISAAPEFS  PSPSPSP+SDI PLFP+PGGA L PSSLPTIPSSPSPPNPD   AAPAPE+ L
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFS--PSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPL

Query:  PPSQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        PPSQSLPFSAA  L+   WCWPVLVALT  + A ELCR
Subjt:  PPSQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

TrEMBL top hitse value%identityAlignment
A0A0A0K510 Uncharacterized protein2.6e-3975.91Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPP-LLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLP
        MAS+FSLYIPIFMAYTAS+FPFSFASYPN FP  L+SSISAAPEF  SPSP+P+SDI PLFP+PG A L PSSLPTIPSSPSPPNPD   AAPAPE+PL 
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPP-LLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLP

Query:  PSQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        PSQSLPFS AA L+SG WC  V VALT  +  AEL R
Subjt:  PSQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

A0A1S3BRG9 classical arabinogalactan protein 261.0e-3570Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPP----LLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPEL
        MAS+FSLYIPIFMAYTAS FPF+FASYPNYFP     + SSISAAPEF  SP+P+PSSDI PLFP+PG A L PSSLPTIPSSPSPPNPD    APAPE+
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPP----LLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPEL

Query:  PLPPSQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        PL P+ S+PFSAAA L+S  WC  V +AL   + AAEL R
Subjt:  PLPPSQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

A0A5A7UQZ3 Classical arabinogalactan protein 261.0e-3570Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPP----LLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPEL
        MAS+FSLYIPIFMAYTAS FPF+FASYPNYFP     + SSISAAPEF  SP+P+PSSDI PLFP+PG A L PSSLPTIPSSPSPPNPD    APAPE+
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPP----LLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPEL

Query:  PLPPSQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        PL P+ S+PFSAAA L+S  WC  V +AL   + AAEL R
Subjt:  PLPPSQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

A0A6J1GPB2 classical arabinogalactan protein 262.8e-4982.35Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP
        MAS+FSLYIPIFMAYTASI PFSFASYPN+FPPL+SSISAAPEFSPSPSPSP+SDI PLFP+PGGA L PSSLPTIPSSPSPPNPD   AAPAPE+PLPP
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP

Query:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        SQSLPFSAAA L+SG WCW + VALTA +  AE+CR
Subjt:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

A0A6J1JX46 classical arabinogalactan protein 265.2e-4880.88Show/hide
Query:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP
        MAS+FSLYIPIFMAYTASIF FSFASYPN+FPPL+SSISAAPEFSPSPSPSP+SDI PLFP+PGGA L PSSLPTIPSSPSPPNPD   A PAPE+PLPP
Subjt:  MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPP

Query:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR
        SQSLPFSAAA L+SG WCW + VALTA +   E+CR
Subjt:  SQSLPFSAAAPLSSGWWCWPVLVALTAVSFAAELCR

SwissProt top hitse value%identityAlignment
Q94F57 Classical arabinogalactan protein 261.5e-0444.83Show/hide
Query:  LSSISAAPEFSP-------SPSPSPSSDIFPLFPSPGGAALTPSS-----LPTIPSSPSPPNPDSTVAAPAPEL-----PLPPSQSL
        LS+ISAAP F P       + +P+ S D  PLFP+PG + ++PS      +PTIPSS SPPNPD+    P  E+     PLP S S+
Subjt:  LSSISAAPEFSP-------SPSPSPSSDIFPLFPSPGGAALTPSS-----LPTIPSSPSPPNPDSTVAAPAPEL-----PLPPSQSL

Arabidopsis top hitse value%identityAlignment
AT2G47930.1 arabinogalactan protein 261.1e-0544.83Show/hide
Query:  LSSISAAPEFSP-------SPSPSPSSDIFPLFPSPGGAALTPSS-----LPTIPSSPSPPNPDSTVAAPAPEL-----PLPPSQSL
        LS+ISAAP F P       + +P+ S D  PLFP+PG + ++PS      +PTIPSS SPPNPD+    P  E+     PLP S S+
Subjt:  LSSISAAPEFSP-------SPSPSPSSDIFPLFPSPGGAALTPSS-----LPTIPSSPSPPNPDSTVAAPAPEL-----PLPPSQSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTTTTCTCTCTCTACATCCCCATTTTCATGGCCTACACAGCTTCTATTTTCCCTTTCTCTTTCGCTTCTTATCCCAATTACTTCCCTCCCCTCCTTTCTTC
CATCTCCGCCGCGCCGGAATTTTCCCCCTCGCCGTCGCCGTCGCCGTCGTCGGACATTTTTCCGCTCTTTCCATCGCCCGGCGGTGCCGCCCTTACGCCGTCCTCCTTGC
CGACCATCCCCTCCAGCCCCAGCCCTCCCAACCCGGATTCTACGGTTGCCGCGCCGGCGCCGGAGCTGCCTCTTCCGCCGTCTCAGTCCTTGCCGTTCTCTGCTGCTGCT
CCTCTCAGCTCCGGTTGGTGGTGTTGGCCTGTTTTGGTGGCTCTCACGGCGGTTTCTTTCGCGGCTGAGCTCTGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGTTTTCTCTCTCTACATCCCCATTTTCATGGCCTACACAGCTTCTATTTTCCCTTTCTCTTTCGCTTCTTATCCCAATTACTTCCCTCCCCTCCTTTCTTC
CATCTCCGCCGCGCCGGAATTTTCCCCCTCGCCGTCGCCGTCGCCGTCGTCGGACATTTTTCCGCTCTTTCCATCGCCCGGCGGTGCCGCCCTTACGCCGTCCTCCTTGC
CGACCATCCCCTCCAGCCCCAGCCCTCCCAACCCGGATTCTACGGTTGCCGCGCCGGCGCCGGAGCTGCCTCTTCCGCCGTCTCAGTCCTTGCCGTTCTCTGCTGCTGCT
CCTCTCAGCTCCGGTTGGTGGTGTTGGCCTGTTTTGGTGGCTCTCACGGCGGTTTCTTTCGCGGCTGAGCTCTGCCGGTGA
Protein sequenceShow/hide protein sequence
MASVFSLYIPIFMAYTASIFPFSFASYPNYFPPLLSSISAAPEFSPSPSPSPSSDIFPLFPSPGGAALTPSSLPTIPSSPSPPNPDSTVAAPAPELPLPPSQSLPFSAAA
PLSSGWWCWPVLVALTAVSFAAELCR