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Lag0002489 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002489
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein no-on-transient A-like
Genome locationchr4:43324776..43325099
RNA-Seq ExpressionLag0002489
SyntenyLag0002489
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]6.8e-1353.98Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASFGVG
        MAAI+ LVS+AL+ LL FSE    S   S+SLTG+  R++L   AH+I + SVESS  RK N +H K  RRIR    +G  G HH+SA NR+R ASF VG
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASFGVG

Query:  -LLCICIFWGIVL
         +LCICIF G+ L
Subjt:  -LLCICIFWGIVL

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]3.1e-1052.34Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAA----ASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIKR----RIRAGLTG----GHHRSAANRNRGA
        MAAIK L+ ++L+ LL FSES + SAA    ASNS+TGM RR+VLQ A H+IAD+        KMNVHIKR    RIR    G    G+ +SAA+R++ A
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAA----ASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIKR----RIRAGLTG----GHHRSAANRNRGA

Query:  SFGVGLL
        SFG+G L
Subjt:  SFGVGLL

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1865.05Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASA----AASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIKRRIRAGLTGGHHRSAANRNRGASFGVGLLC
        MAA+K LVS+AL+ LLLFSES  ASA      SNSLTGM RR+VLQ AAH+IADNSVESS  RKMNVHIKRR+R   T G   SAANR+R AS GVG + 
Subjt:  MAAIKFLVSLALVVLLLFSESPAASA----AASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIKRRIRAGLTGGHHRSAANRNRGASFGVGLLC

Query:  ICI
        + +
Subjt:  ICI

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]4.1e-1050Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAA----ASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIK-------RRIRAGLTGGHHRSAANRNRGAS
        MAAIK L+S++L+ LL FSES + SAA    ASNS+T M RR++LQ A H+IAD+        KMNV IK       R I AG   G   SAANR+R  S
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAA----ASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIK-------RRIRAGLTGGHHRSAANRNRGAS

Query:  FGVGLLCICIFWGIVL
        FG+G L    F+G+VL
Subjt:  FGVGLLCICIFWGIVL

XP_008451651.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]2.3e-0852.58Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF
        MAAI+ LVS+AL+ LL FSE    S   S+SLTG+  R++L   AH+I + SVESS  RK N +H K  RRIR    +G  G HH+SA NR+R ASF
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF

TrEMBL top hitse value%identityAlignment
A0A0A0K929 Uncharacterized protein9.2e-0845.76Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESS---VGRKMNVHIK--RRIRAG------LTGGHHRSAANR-NRGA
        MAAI+ L+S+A + L  FSE    S   S+SLTG+  R +L  AAH+I D SVE S   + +   +HIK  R+ R+G        G HH+SAANR +  A
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESS---VGRKMNVHIK--RRIRAG------LTGGHHRSAANR-NRGA

Query:  SFGVG-LLCICIFWGIVL
        S  VG +LCICIF G+ L
Subjt:  SFGVG-LLCICIFWGIVL

A0A0A0KAQ7 Uncharacterized protein2.0e-1050Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAA----ASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIK-------RRIRAGLTGGHHRSAANRNRGAS
        MAAIK L+S++L+ LL FSES + SAA    ASNS+T M RR++LQ A H+IAD+        KMNV IK       R I AG   G   SAANR+R  S
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAA----ASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIK-------RRIRAGLTGGHHRSAANRNRGAS

Query:  FGVGLLCICIFWGIVL
        FG+G L    F+G+VL
Subjt:  FGVGLLCICIFWGIVL

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like1.1e-0852.58Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF
        MAAI+ LVS+AL+ LL FSE    S   S+SLTG+  R++L   AH+I + SVESS  RK N +H K  RRIR    +G  G HH+SA NR+R ASF
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF

A0A5A7VLE5 Protein no-on-transient A-like1.5e-1052.34Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAA----ASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIKR----RIRAGLTG----GHHRSAANRNRGA
        MAAIK L+ ++L+ LL FSES + SAA    ASNS+TGM RR+VLQ A H+IAD+        KMNVHIKR    RIR    G    G+ +SAA+R++ A
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAA----ASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIKR----RIRAGLTG----GHHRSAANRNRGA

Query:  SFGVGLL
        SFG+G L
Subjt:  SFGVGLL

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like3.3e-1353.98Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASFGVG
        MAAI+ LVS+AL+ LL FSE    S   S+SLTG+  R++L   AH+I + SVESS  RK N +H K  RRIR    +G  G HH+SA NR+R ASF VG
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASFGVG

Query:  -LLCICIFWGIVL
         +LCICIF G+ L
Subjt:  -LLCICIFWGIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGATCAAATTCCTAGTTTCGCTAGCTCTTGTCGTTCTTCTCTTGTTCTCTGAGTCTCCAGCCGCTTCTGCCGCCGCTTCGAATTCTCTTACCGGAATGTTTCG
CCGGGACGTCCTTCAGGCGGCGGCTCATAAGATTGCAGATAACAGTGTCGAGTCCTCTGTTGGACGGAAGATGAATGTTCATATCAAAAGGCGGATCCGAGCGGGACTAA
CCGGTGGCCACCACAGATCGGCGGCGAATCGGAACCGAGGCGCGTCCTTTGGCGTTGGATTGCTTTGTATCTGCATTTTTTGGGGGATTGTTCTTGATCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCGATCAAATTCCTAGTTTCGCTAGCTCTTGTCGTTCTTCTCTTGTTCTCTGAGTCTCCAGCCGCTTCTGCCGCCGCTTCGAATTCTCTTACCGGAATGTTTCG
CCGGGACGTCCTTCAGGCGGCGGCTCATAAGATTGCAGATAACAGTGTCGAGTCCTCTGTTGGACGGAAGATGAATGTTCATATCAAAAGGCGGATCCGAGCGGGACTAA
CCGGTGGCCACCACAGATCGGCGGCGAATCGGAACCGAGGCGCGTCCTTTGGCGTTGGATTGCTTTGTATCTGCATTTTTTGGGGGATTGTTCTTGATCTGTAA
Protein sequenceShow/hide protein sequence
MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIKRRIRAGLTGGHHRSAANRNRGASFGVGLLCICIFWGIVLDL