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Lag0002490 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002490
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein no-on-transient A-like
Genome locationchr4:43326517..43326858
RNA-Seq ExpressionLag0002490
SyntenyLag0002490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]2.4e-1652.14Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVL---IKKRLRPV-VTGTGGRGRTSAANRGRAAS
        MAAI+ LVS+A +ALL FS+S  T        S+SLTG+  RNIL T AHRI + + +SS+ RK N L    ++R+RP+ ++G+ G    SA NR R AS
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVL---IKKRLRPV-VTGTGGRGRTSAANRGRAAS

Query:  FGVGSVLCISIFLGLFL
        F VGS+LCI IFLGLFL
Subjt:  FGVGSVLCISIFLGLFL

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]4.8e-1756.76Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKK----RLRPVVTGTGGRG-RTSAANRGRAA
        MAAIKSL+ ++ +ALL FS+S +TSAAD    SNS+TGMLRRN+LQTA H IAD+ G      KMNV IK+    R+RPV  GTG  G R SAA+R + A
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKK----RLRPVVTGTGGRG-RTSAANRGRAA

Query:  SFGVGSVLCIS
        SFG+G +L  S
Subjt:  SFGVGSVLCIS

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]6.7e-2768.14Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKKRLRPVVTGTGGRGRTSAANRGRAASFGVG
        MAA+KSLVS+A +ALLLFS+S   SA DR   SNSLTGMLRRN+LQTAAH+IADN+ +SS +RKMNV IK+R+RPV TGT    R+SAANR R AS GVG
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKKRLRPVVTGTGGRGRTSAANRGRAASFGVG

Query:  SVLCISIFLGLFL
        SVL   + LGLFL
Subjt:  SVLCISIFLGLFL

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1554.7Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAA--HRIADNNGDSSFDRKMNVLIKK--RLRPVVTGTGGRGRTSAANRGRAAS
        MAAIK+L+S+A IALLLF +S  TSAA     S SL G+LRRNI+QT A  H++A        ++K NV IK+  R+RPV+    GR +TSAANR R A 
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAA--HRIADNNGDSSFDRKMNVLIKK--RLRPVVTGTGGRGRTSAANRGRAAS

Query:  FGVGSVLCISIFLGLFL
         GVGS+LCI + LGLFL
Subjt:  FGVGSVLCISIFLGLFL

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]1.3e-1756.41Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKK----RLRPVVTGTGGRGRTSAANRGRAAS
        MAAIKSL+S++ +ALL FS+S +TSAA+    SNS+T MLRRNILQTA H IAD+ G      KMNV IKK    R RP+  GTG   R+SAANR R  S
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKK----RLRPVVTGTGGRGRTSAANRGRAAS

Query:  FGVGSVLCISIFLGLFL
        FG+G +L    F GL L
Subjt:  FGVGSVLCISIFLGLFL

TrEMBL top hitse value%identityAlignment
A0A0A0K929 Uncharacterized protein3.6e-1048.36Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGD-SSFD-RKMNVLIKKRLRP------VVTGTGGRGRTSAANR-
        MAAI+ L+S+AF+AL  FS+S  T        S+SLTG+  R IL TAAHRI D + + SS+  RK N L  K +R       +V+ + G    SAANR 
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGD-SSFD-RKMNVLIKKRLRP------VVTGTGGRGRTSAANR-

Query:  GRAASFGVGSVLCISIFLGLFL
           AS  VGS+LCI IFLGLFL
Subjt:  GRAASFGVGSVLCISIFLGLFL

A0A0A0KAQ7 Uncharacterized protein6.1e-1856.41Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKK----RLRPVVTGTGGRGRTSAANRGRAAS
        MAAIKSL+S++ +ALL FS+S +TSAA+    SNS+T MLRRNILQTA H IAD+ G      KMNV IKK    R RP+  GTG   R+SAANR R  S
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKK----RLRPVVTGTGGRGRTSAANRGRAAS

Query:  FGVGSVLCISIFLGLFL
        FG+G +L    F GL L
Subjt:  FGVGSVLCISIFLGLFL

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like2.7e-1043.22Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVL---IKKRLRPV-VTGTGGRGRTSAANRGRAAS
        MAAI+ LVS+A +ALL FS+S  T        S+SLTG+  RNIL T AHRI + + +SS+ RK N L    ++R+RP+ ++G+ G    SA NR R AS
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVL---IKKRLRPV-VTGTGGRGRTSAANRGRAAS

Query:  F---------GVGSVLCI
        F          +G V+C+
Subjt:  F---------GVGSVLCI

A0A5A7VLE5 Protein no-on-transient A-like2.3e-1756.76Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKK----RLRPVVTGTGGRG-RTSAANRGRAA
        MAAIKSL+ ++ +ALL FS+S +TSAAD    SNS+TGMLRRN+LQTA H IAD+ G      KMNV IK+    R+RPV  GTG  G R SAA+R + A
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKK----RLRPVVTGTGGRG-RTSAANRGRAA

Query:  SFGVGSVLCIS
        SFG+G +L  S
Subjt:  SFGVGSVLCIS

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like1.2e-1652.14Show/hide
Query:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVL---IKKRLRPV-VTGTGGRGRTSAANRGRAAS
        MAAI+ LVS+A +ALL FS+S  T        S+SLTG+  RNIL T AHRI + + +SS+ RK N L    ++R+RP+ ++G+ G    SA NR R AS
Subjt:  MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVL---IKKRLRPV-VTGTGGRGRTSAANRGRAAS

Query:  FGVGSVLCISIFLGLFL
        F VGS+LCI IFLGLFL
Subjt:  FGVGSVLCISIFLGLFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGATCAAATCCCTAGTTTCCATGGCTTTCATCGCTCTTCTCTTGTTCTCCGATTCCCCGGCCACTTCCGCCGCCGATCGCGGCGAGCCTTCGAATTCTCTCAC
CGGAATGCTCCGCCGGAACATCCTTCAGACGGCGGCTCATCGGATTGCTGACAACAACGGCGATTCCTCTTTCGATCGGAAAATGAATGTTCTTATCAAAAAGCGGCTTC
GACCTGTAGTAACTGGCACCGGCGGCCGTGGCCGTACATCGGCGGCGAATCGGGGCCGAGCTGCGTCGTTTGGCGTTGGATCTGTGCTGTGTATCTCCATTTTTTTGGGA
TTGTTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCGATCAAATCCCTAGTTTCCATGGCTTTCATCGCTCTTCTCTTGTTCTCCGATTCCCCGGCCACTTCCGCCGCCGATCGCGGCGAGCCTTCGAATTCTCTCAC
CGGAATGCTCCGCCGGAACATCCTTCAGACGGCGGCTCATCGGATTGCTGACAACAACGGCGATTCCTCTTTCGATCGGAAAATGAATGTTCTTATCAAAAAGCGGCTTC
GACCTGTAGTAACTGGCACCGGCGGCCGTGGCCGTACATCGGCGGCGAATCGGGGCCGAGCTGCGTCGTTTGGCGTTGGATCTGTGCTGTGTATCTCCATTTTTTTGGGA
TTGTTCTTGTGA
Protein sequenceShow/hide protein sequence
MAAIKSLVSMAFIALLLFSDSPATSAADRGEPSNSLTGMLRRNILQTAAHRIADNNGDSSFDRKMNVLIKKRLRPVVTGTGGRGRTSAANRGRAASFGVGSVLCISIFLG
LFL