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Lag0002492 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002492
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationchr4:43330761..43331096
RNA-Seq ExpressionLag0002492
SyntenyLag0002492
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575858.1 hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2267.62Show/hide
Query:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS
        MA IKSL+SIAL++LLL+SE    SAA HG A S  LAG+  R+ LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN SR SSFG+GS
Subjt:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS

Query:  VLCLC
        +LCLC
Subjt:  VLCLC

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1153.51Show/hide
Query:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIR---RRPRRPVKRAEGPSPSAANRSRMSSFGV
        MA++KSL+S+AL++LLL SES  T++AV     SNSL G++ RN+LQTA H Q+A+N + E S E+K+    +R  RPV  A G   SAANRSR++S GV
Subjt:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIR---RRPRRPVKRAEGPSPSAANRSRMSSFGV

Query:  GSVLCLCIVLGLFV
        GSVL   +VLGLF+
Subjt:  GSVLCLCIVLGLFV

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1560.18Show/hide
Query:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQ-TADHRQVAENKNGEYSFEQKIRRRPR-RPVKRAEGPSPSAANRSRMSSFGVG
        MA+IK+LLSIAL++LLL  ES  TSAAVH GA S SLAGI+ RNI+Q TADH QVAE K     F   I+RR R RPV     P  SAANRSR +  GVG
Subjt:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQ-TADHRQVAENKNGEYSFEQKIRRRPR-RPVKRAEGPSPSAANRSRMSSFGVG

Query:  SVLCLCIVLGLFV
        S+LC+ ++LGLF+
Subjt:  SVLCLCIVLGLFV

XP_022954099.1 uncharacterized protein LOC111456466 [Cucurbita moschata]5.7e-2366.07Show/hide
Query:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS
        MA IKSL+SIAL++LLL+SE    SAA HG A S  LA +  R+ LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN S+ SSFGVGS
Subjt:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS

Query:  VLCLCIVLGLFV
        +LCLC V GLF+
Subjt:  VLCLCIVLGLFV

XP_022992473.1 uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]7.5e-2366.07Show/hide
Query:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS
        MA IKSL+SIAL++LLL+ E    SAA HG A S  LAG+   + LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN SR SSFGVGS
Subjt:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS

Query:  VLCLCIVLGLFV
        +LCLC V GLF+
Subjt:  VLCLCIVLGLFV

TrEMBL top hitse value%identityAlignment
A0A0A0K7L9 Uncharacterized protein3.1e-0645.22Show/hide
Query:  ASIKSLLSIALVSL-LLISESPATSAAVHGGAYSNSLAGI--IHRNILQTADHRQVAENKNGEYSFEQKIRRRPRRPVKR--AEGPSPSAANRSRMSSFG
        +S+K+L+SI  ++L +L+S++P+TS+AV      +SL  I   HRN+LQ  D  Q     +G        RRR RR V R  A+ PSPS ANRS+  S G
Subjt:  ASIKSLLSIALVSL-LLISESPATSAAVHGGAYSNSLAGI--IHRNILQTADHRQVAENKNGEYSFEQKIRRRPRRPVKR--AEGPSPSAANRSRMSSFG

Query:  VGSVLCLCIVLGLFV
         GSVL L IV+ LFV
Subjt:  VGSVLCLCIVLGLFV

A0A0A0K934 Uncharacterized protein6.4e-1252.58Show/hide
Query:  IKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKI-RRRPRRPVKRAEGPSPSAANRSRMSSFGVG
        IKSL+S+AL++LLL+S  P+TSA  H  A ++ +       + Q  +++QV ENKNG  YSFEQKI ++R RR  K AEGPSPS ANRSRM+ F +G
Subjt:  IKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKI-RRRPRRPVKRAEGPSPSAANRSRMSSFGVG

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like7.3e-0845.83Show/hide
Query:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIR------RRPRRPVKRAEGPS---PSAANRSR
        MA+I+ L+SIAL++LL  SES  T         S+SL GI HRNIL T  HR V  N + E S+++K        RR  RP+  +        SA NRSR
Subjt:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIR------RRPRRPVKRAEGPS---PSAANRSR

Query:  MSSFGVGSVLCLCIVLGLFV
        ++SF VGS+LC+CI LGLF+
Subjt:  MSSFGVGSVLCLCIVLGLFV

A0A6J1GRX2 uncharacterized protein LOC1114564662.8e-2366.07Show/hide
Query:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS
        MA IKSL+SIAL++LLL+SE    SAA HG A S  LA +  R+ LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN S+ SSFGVGS
Subjt:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS

Query:  VLCLCIVLGLFV
        +LCLC V GLF+
Subjt:  VLCLCIVLGLFV

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X13.6e-2366.07Show/hide
Query:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS
        MA IKSL+SIAL++LLL+ E    SAA HG A S  LAG+   + LQTA+  QVAEN  G +YSFEQKIRRR RR V+RAEGPSPS+AN SR SSFGVGS
Subjt:  MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNG-EYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGS

Query:  VLCLCIVLGLFV
        +LCLC V GLF+
Subjt:  VLCLCIVLGLFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCAAATCCCTACTTTCAATTGCTCTTGTCTCTCTTCTCTTGATCTCTGAATCCCCGGCCACTTCCGCCGCCGTCCACGGTGGAGCTTATTCCAATTCTCT
TGCCGGAATCATTCACCGGAACATCCTTCAGACGGCGGATCATCGTCAAGTTGCAGAGAATAAGAATGGAGAGTACTCGTTTGAACAAAAGATCAGAAGGCGGCCCCGAC
GACCCGTAAAGAGAGCCGAAGGTCCAAGTCCGTCGGCTGCGAATCGGAGCCGAATGTCGTCGTTTGGTGTCGGGTCTGTGTTGTGTCTCTGTATTGTTCTTGGCTTGTTC
GTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCAAATCCCTACTTTCAATTGCTCTTGTCTCTCTTCTCTTGATCTCTGAATCCCCGGCCACTTCCGCCGCCGTCCACGGTGGAGCTTATTCCAATTCTCT
TGCCGGAATCATTCACCGGAACATCCTTCAGACGGCGGATCATCGTCAAGTTGCAGAGAATAAGAATGGAGAGTACTCGTTTGAACAAAAGATCAGAAGGCGGCCCCGAC
GACCCGTAAAGAGAGCCGAAGGTCCAAGTCCGTCGGCTGCGAATCGGAGCCGAATGTCGTCGTTTGGTGTCGGGTCTGTGTTGTGTCTCTGTATTGTTCTTGGCTTGTTC
GTATAG
Protein sequenceShow/hide protein sequence
MASIKSLLSIALVSLLLISESPATSAAVHGGAYSNSLAGIIHRNILQTADHRQVAENKNGEYSFEQKIRRRPRRPVKRAEGPSPSAANRSRMSSFGVGSVLCLCIVLGLF
V