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Lag0002493 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002493
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationchr4:43333719..43334057
RNA-Seq ExpressionLag0002493
SyntenyLag0002493
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575858.1 hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2368.87Show/hide
Query:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLIS+AL+ALLL+SE LP SAA H  A + LAG+  R+ LQTA+ HQVAEN    +YSFEQKIRRR+RR+V R AEGPSPS+AN SRT+SFG+G
Subjt:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLC
        S+LCLC
Subjt:  SVLCLC

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1254.63Show/hide
Query:  IKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENRNAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLCL
        +KSL+S+AL+ALLL SESL  SA   +G SNSL G+L RN+LQTA  HQ+A+N + E S E+K+    +R +   A G   SAANRSR AS GVGSVL  
Subjt:  IKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENRNAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLCL

Query:  CIVFGLFV
         +V GLF+
Subjt:  CIVFGLFV

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]4.0e-1658.72Show/hide
Query:  IKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQ-TADHHQVAENRNAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLC
        IK+L+S+AL+ALLL  ESLPTSAAVH GAS SLAGIL RN++Q TADHHQVAE +     F   I+RR R         P  SAANRSR A  GVGS+LC
Subjt:  IKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQ-TADHHQVAENRNAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLC

Query:  LCIVFGLFV
        + ++ GLF+
Subjt:  LCIVFGLFV

XP_022954099.1 uncharacterized protein LOC111456466 [Cucurbita moschata]1.8e-2468.14Show/hide
Query:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLIS+AL+ALLL+SE LP SAA H  A + LA +  R+ LQTA+ HQVAEN    +YSFEQKIRRR+RR+V R AEGPSPS+AN S+T+SFGVG
Subjt:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLCIVFGLFV
        S+LCLC VFGLF+
Subjt:  SVLCLCIVFGLFV

XP_022992473.1 uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]2.3e-2468.14Show/hide
Query:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLIS+AL+ALLL+ E LP SAA H  A + LAG+   + LQTA+ HQVAEN    +YSFEQKIRRR+RR+V R AEGPSPS+AN SRT+SFGVG
Subjt:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLCIVFGLFV
        S+LCLC VFGLF+
Subjt:  SVLCLCIVFGLFV

TrEMBL top hitse value%identityAlignment
A0A0A0K7L9 Uncharacterized protein3.7e-0744.44Show/hide
Query:  MAPMIKSLISMALVALLLISESLP--TSAAVHAGASNSLAGI--LHRNMLQTADHHQVAENRNAEYSFEQKIRRRSRRSVER-AAEGPSPSAANRSRTAS
        MA  +K+L+S+  +AL ++    P  +SA +H  A +SL  I   HRN+LQ  D HQ               RRR+RR+V R  A+ PSPS ANRS+T S
Subjt:  MAPMIKSLISMALVALLLISESLP--TSAAVHAGASNSLAGI--LHRNMLQTADHHQVAENRNAEYSFEQKIRRRSRRSVER-AAEGPSPSAANRSRTAS

Query:  FGVGSVLCLCIVFGLFV
         G GSVL L IV  LFV
Subjt:  FGVGSVLCLCIVFGLFV

A0A0A0K934 Uncharacterized protein6.1e-1052Show/hide
Query:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENRNA-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        M P IKSLIS+AL+ALLL+S    TSA  H  A NS  G     M Q  ++ QV EN+N   YSFEQKI ++  R  ++ AEGPSPS ANRSR   F +G
Subjt:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENRNA-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like1.1e-0645.69Show/hide
Query:  IKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENRNAEYSFEQKI-------RRRSRRSVERAAEG-PSPSAANRSRTASF
        I+ L+S+AL+ALL  SESL T        S+SL GI HRN+L T  H  V  N + E S+++K        RRR R  +   + G    SA NRSR ASF
Subjt:  IKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENRNAEYSFEQKI-------RRRSRRSVERAAEG-PSPSAANRSRTASF

Query:  GVGSVLCLCIVFGLFV
         VGS+LC+CI  GLF+
Subjt:  GVGSVLCLCIVFGLFV

A0A6J1GRX2 uncharacterized protein LOC1114564668.7e-2568.14Show/hide
Query:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLIS+AL+ALLL+SE LP SAA H  A + LA +  R+ LQTA+ HQVAEN    +YSFEQKIRRR+RR+V R AEGPSPS+AN S+T+SFGVG
Subjt:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLCIVFGLFV
        S+LCLC VFGLF+
Subjt:  SVLCLCIVFGLFV

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X11.1e-2468.14Show/hide
Query:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLIS+AL+ALLL+ E LP SAA H  A + LAG+   + LQTA+ HQVAEN    +YSFEQKIRRR+RR+V R AEGPSPS+AN SRT+SFGVG
Subjt:  MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENR-NAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLCIVFGLFV
        S+LCLC VFGLF+
Subjt:  SVLCLCIVFGLFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCATGATCAAATCCCTAATTTCGATGGCGCTTGTCGCTCTTCTCTTGATCTCTGAATCCCTACCCACTTCTGCCGCCGTTCACGCCGGCGCTTCCAATTCTCT
TGCCGGAATTCTTCACCGGAATATGCTCCAGACGGCGGATCATCATCAAGTTGCAGAGAATAGGAATGCAGAGTACTCTTTTGAACAAAAGATTAGAAGGCGGAGCCGAC
GATCCGTAGAGAGAGCCGCCGAAGGTCCGAGTCCATCGGCGGCGAATCGGAGCCGAACGGCGTCGTTTGGCGTCGGGTCTGTGCTGTGTCTCTGTATTGTTTTTGGTTTG
TTCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCATGATCAAATCCCTAATTTCGATGGCGCTTGTCGCTCTTCTCTTGATCTCTGAATCCCTACCCACTTCTGCCGCCGTTCACGCCGGCGCTTCCAATTCTCT
TGCCGGAATTCTTCACCGGAATATGCTCCAGACGGCGGATCATCATCAAGTTGCAGAGAATAGGAATGCAGAGTACTCTTTTGAACAAAAGATTAGAAGGCGGAGCCGAC
GATCCGTAGAGAGAGCCGCCGAAGGTCCGAGTCCATCGGCGGCGAATCGGAGCCGAACGGCGTCGTTTGGCGTCGGGTCTGTGCTGTGTCTCTGTATTGTTTTTGGTTTG
TTCGTGTGA
Protein sequenceShow/hide protein sequence
MAPMIKSLISMALVALLLISESLPTSAAVHAGASNSLAGILHRNMLQTADHHQVAENRNAEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLCLCIVFGL
FV