CuGenDBv2

Gene ID	Lag0002549
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Nucleolar protein 16
Genome location	chr4:43766319..43767510
RNA-Seq Expression	Lag0002549
Synteny	Lag0002549
Gene Ontology terms	GO:0042273 - ribosomal large subunit biogenesis (biological process) GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR019002 - Ribosome biogenesis protein Nop16

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7014368.1 hypothetical protein SDJN02_24545, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.0e-97

94.3

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYKRSR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESD LQVPPS PPSDDP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKR+ GKSAPLKPLTTIQRVHVGRL+EKYGDD+E MFMDTKLNSMQHSVATLE LCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

XP_022954094.1 uncharacterized protein LOC111456462 [Cucurbita moschata]

7.2e-98

94.82

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYKRSR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESD LQVPPS PPSDDP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKR+DGKSAPLKPLTTIQRVHVGRL+EKYGDD+E MFMDTKLNSMQHSVATLE LCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

XP_022991747.1 uncharacterized protein LOC111488281 [Cucurbita maxima]

6.5e-99

95.85

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYKRSR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPS PPSDDP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRL+EKYGDD+E MFMDTKLNSMQHSVATLE LCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

XP_023547523.1 uncharacterized protein LOC111806441 [Cucurbita pepo subsp. pepo]

2.5e-98

95.34

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYKRSR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPS PPSDDP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRL+EKYGDD+E MFMDTKLNSMQHSVATLE LCKRYH CLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

XP_038898931.1 nucleolar protein 16 [Benincasa hispida]

6.5e-99

94.82

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYKRSRPKVKVGLPKR+PNVFKPSFCMPPKLRSLLAEQFEEDPTWD+KA VIHNYKSFGV+SNPNLLSVRSRTDHIVESDSLQVPPSQPPSD+P
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTTIQRVHVGRL+EKYGDDYE MFMDTKLNSMQHSVATLE LCKRYHSCLDKNPLIL R
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAV9 Nucleolar protein 16

2.0e-93

90.67

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYK+SRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEK SVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQV    PPSDDP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        D+VLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTT+QRVHVG+L+EKYGDDY+ MFMDTKLNSMQHSVATLE LCKRY+SCLD NPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

A0A1S3BSM4 Nucleolar protein 16

3.6e-95

92.23

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYK+SRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEK SVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQV    PPSDDP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTT+QRVHVG+L+EKYGDDY+ MFMDTKLNSMQHSVATLE LCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

A0A5A7VLA5 Nucleolar protein 16

3.6e-95

92.23

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYK+SRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEK SVI NYKSFGV+SNPNLLSVRSRTDHIVESDSLQV    PPSDDP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPL+PLTT+QRVHVG+L+EKYGDDY+ MFMDTKLNSMQHSVATLE LCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

A0A6J1GRW5 Nucleolar protein 16

3.5e-98

94.82

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYKRSR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESD LQVPPS PPSDDP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKR+DGKSAPLKPLTTIQRVHVGRL+EKYGDD+E MFMDTKLNSMQHSVATLE LCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

A0A6J1JMQ4 Nucleolar protein 16

3.2e-99

95.85

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP
        MGRSRRKYKRSR KV+VGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDP WDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPS PPSDDP
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDP

Query:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR
        DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRL+EKYGDD+E MFMDTKLNSMQHSVATLE LCKRYHSCLDKNPLILTR
Subjt:  DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

SwissProt top hits

e value

%identity

Alignment

Q9Y7Z1 Nucleolar protein 16

5.7e-05

24.76

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Query:  RSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLS----------VRSRTDHIVESDSL-QVP
        R R K +  +P+    L +RN N          K ++ +   F     WD+ A++  NY   G+L+ PN ++           R   D  + S+ L ++ 
Subjt:  RSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLS----------VRSRTDHIVESDSL-QVP

Query:  PSQPPS------DDPDSVLD------SSGSDVEEDDLKTALGK------------KRKDGKSAPLKPLTTIQRVHVGRLVEKYG-DDYEGMFMDTKLNSM
         S PP       DD  ++++       +  DV + ++  A  K            K+   +S  + PL+  +  ++ RL+ KYG +D+E M  D KLNS 
Subjt:  PSQPPS------DDPDSVLD------SSGSDVEEDDLKTALGK------------KRKDGKSAPLKPLTTIQRVHVGRLVEKYG-DDYEGMFMDTKLNSM

Query:  QHSVATLENL
          + + L+NL
Subjt:  QHSVATLENL

Arabidopsis top hits

e value

%identity

Alignment

AT1G02870.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome biogenesis protein Nop16 (InterPro:IPR019002); Has 104 Blast hits to 104 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

2.4e-67

64.29

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Query:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPS-QPPSDD
        M RSRRKY+ SR KV+V LPK+NPN+FKP+F  PPKLR+L+    ++ P WD++ASVI NYKSFGV+SNPNLL +R+RTDH+++ DSL VPP  +PP+DD
Subjt:  MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPS-QPPSDD

Query:  P---DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILT
        P   +     SGS++EEDDLKTALGK+RKDGKSAPL+PLTT+QR H+ RLVEK+GDD EGM+ D KLNSMQHSVATL  LC RY    DKNP++++
Subjt:  P---DSVLDSSGSDVEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILT

Sequences

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CDS sequence

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ATGGGAAGATCTCGAAGAAAGTACAAGAGATCTCGGCCAAAAGTCAAGGTCGGCCTGCCCAAAAGAAACCCCAATGTTTTCAAGCCATCCTTCTGCATGCCGCCGAAGCT
CCGCTCTTTGCTCGCCGAACAATTCGAAGAAGATCCCACATGGGACGAGAAAGCCAGTGTCATTCACAACTACAAGTCCTTCGGTGTTCTTTCCAACCCTAATTTGCTCA
GCGTTCGTTCCCGAACTGATCACATCGTTGAGAGCGACTCTCTCCAGGTCCCGCCGTCTCAGCCGCCCTCCGATGACCCTGATTCTGTGCTGGATTCTTCTGGTAGCGAT
GTCGAGGAGGACGATTTGAAAACAGCTCTGGGAAAGAAGCGCAAAGATGGCAAATCTGCTCCTCTAAAACCTTTAACCACGATTCAACGTGTTCATGTTGGTAGGCTAGT
TGAGAAATATGGAGATGATTATGAGGGGATGTTCATGGATACAAAGCTGAACTCAATGCAACATTCTGTTGCCACTCTGGAGAATCTATGCAAAAGATATCACAGTTGTT
TAGATAAGAATCCATTGATATTGACTCGATAA

mRNA sequence

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Protein sequence

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MGRSRRKYKRSRPKVKVGLPKRNPNVFKPSFCMPPKLRSLLAEQFEEDPTWDEKASVIHNYKSFGVLSNPNLLSVRSRTDHIVESDSLQVPPSQPPSDDPDSVLDSSGSD
VEEDDLKTALGKKRKDGKSAPLKPLTTIQRVHVGRLVEKYGDDYEGMFMDTKLNSMQHSVATLENLCKRYHSCLDKNPLILTR

Lag0002549 (gene) of Sponge gourd (AG-4) v1 genome