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Lag0002554 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002554
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:43799314..43800489
RNA-Seq ExpressionLag0002554
SyntenyLag0002554
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2598128.1 ribonuclease H protein [Pyrus ussuriensis x Pyrus communis]7.8e-0541.33Show/hide
Query:  DEIFWGSNPKGNFTVVKHAYFLAQNLS-IVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANV
        DE+ W   PKGNFT  K  YF+ ++ S I  D+   + + L   WK  W+ KV  K K C WR   N LPT+ N+
Subjt:  DEIFWGSNPKGNFTVVKHAYFLAQNLS-IVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANV

XP_024178154.1 uncharacterized protein LOC112184104 [Rosa chinensis]4.6e-0538.27Show/hide
Query:  NNSKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAK
        +N  D   WG + KG FT VK AY +AQN  + +D ST NP     +WK  W+  V    K C  +   NILPT++ ++ +
Subjt:  NNSKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAK

XP_028946810.1 uncharacterized protein LOC103403753 [Malus domestica]3.8e-0742.5Show/hide
Query:  DEIFWGSNPKGNFTVVKHAYFLAQNLSIV---EDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAK
        DE+FW  +PKG FT  K AYF+A+  S +     V +  P ++K +WK  W+ KV  K K C WR   N LP++AN+  K
Subjt:  DEIFWGSNPKGNFTVVKHAYFLAQNLSIV---EDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAK

XP_030970994.1 uncharacterized protein LOC115991444 [Quercus lobata]1.4e-0639.24Show/hide
Query:  SKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAK
        +KD IFW  N  GN++ VK  Y +     +V+  S SNP  +KA+WK  WK KV P+ +   WR   + LPT+ N+  +
Subjt:  SKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAK

XP_040374850.1 uncharacterized protein LOC112200370 [Rosa chinensis]2.1e-0532.22Show/hide
Query:  NSKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAKYPQMTSYRPL
        N +D   WG + +G FT VK AY +A+N  + +  +T NP    ++W   W + V    K CAW+ + N+LPT++ ++ +   + +  PL
Subjt:  NSKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAKYPQMTSYRPL

TrEMBL top hitse value%identityAlignment
A0A2N9GTH6 Uncharacterized protein3.2e-0437.84Show/hide
Query:  DEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANV
        D + W    KGNFTV      L    S  E   +S  ++   +W   WK +V PK K   WR  +NILPTQ N+
Subjt:  DEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANV

A0A2N9IE72 Uncharacterized protein3.2e-0437.84Show/hide
Query:  DEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANV
        D + W    KGNFTV      L    S  E   +S  ++   +W   WK +V PK K   WR  +NILPTQ N+
Subjt:  DEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANV

A0A803P379 Uncharacterized protein3.2e-0440.51Show/hide
Query:  SKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAK
        S D + WG +  G  T VK+AY LA +L+ V+  S+SNP      WK  W   V PK K   WR   +ILP   N+  K
Subjt:  SKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAK

A0A803Q247 Uncharacterized protein4.2e-0431.65Show/hide
Query:  MNNSKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANV
        +++  D +FW ++ KGNF+ VK+AY+L+QN     +         +  W+  WK K+ P++K   W+ + N LP ++N+
Subjt:  MNNSKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANV

A0A803Q3L9 Uncharacterized protein1.1e-0433.33Show/hide
Query:  NNSKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAKYPQMTSYRP
        +NS D  +W     G+++ VK AY L Q+L +    S S+      +W+D W  K+ PK K   WR + N LPT+A +  ++  + S  P
Subjt:  NNSKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAKYPQMTSYRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACTCAAAGGATGAAATCTTTTGGGGGTCGAATCCAAAGGGGAATTTCACCGTCGTCAAACATGCCTACTTCTTAGCACAAAATCTCTCAATAGTTGAGGATGT
TTCTACGTCAAATCCCTTGAAGTTAAAAGCGATGTGGAAAGACCAATGGAAAACCAAGGTCATCCCTAAGGAGAAAACTTGTGCTTGGAGGGAAATCCAAAACATTTTAC
CAACCCAAGCAAATGTTACAGCTAAATATCCTCAAATGACGTCGTATAGACCTCTGTTTTCACAATCTCAAACTCAACTTAATGAGCACGACCAGGACCGTACCGTCCAG
ACCGCCACCGATGAAAGCCACCCCTCAGCCGCCCACCGTCGTCCGTTTCCTCTCTTCACCGTTAGATGTCGGCTCTGGCCACCGCCGTCTGAAGGTTTCGATCGTCGCAG
GAGTAAGGCCTCTGCCCCTCAGCTTTCATTTTCAGTTACTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACTCAAAGGATGAAATCTTTTGGGGGTCGAATCCAAAGGGGAATTTCACCGTCGTCAAACATGCCTACTTCTTAGCACAAAATCTCTCAATAGTTGAGGATGT
TTCTACGTCAAATCCCTTGAAGTTAAAAGCGATGTGGAAAGACCAATGGAAAACCAAGGTCATCCCTAAGGAGAAAACTTGTGCTTGGAGGGAAATCCAAAACATTTTAC
CAACCCAAGCAAATGTTACAGCTAAATATCCTCAAATGACGTCGTATAGACCTCTGTTTTCACAATCTCAAACTCAACTTAATGAGCACGACCAGGACCGTACCGTCCAG
ACCGCCACCGATGAAAGCCACCCCTCAGCCGCCCACCGTCGTCCGTTTCCTCTCTTCACCGTTAGATGTCGGCTCTGGCCACCGCCGTCTGAAGGTTTCGATCGTCGCAG
GAGTAAGGCCTCTGCCCCTCAGCTTTCATTTTCAGTTACTGTCTAA
Protein sequenceShow/hide protein sequence
MNNSKDEIFWGSNPKGNFTVVKHAYFLAQNLSIVEDVSTSNPLKLKAMWKDQWKTKVIPKEKTCAWREIQNILPTQANVTAKYPQMTSYRPLFSQSQTQLNEHDQDRTVQ
TATDESHPSAAHRRPFPLFTVRCRLWPPPSEGFDRRRSKASAPQLSFSVTV