; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002559 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002559
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L22-2
Genome locationchr4:43820473..43821637
RNA-Seq ExpressionLag0002559
SyntenyLag0002559
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136027.1 60S ribosomal protein L22-2 [Cucumis sativus]8.7e-6097.62Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGDSVTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022953729.1 60S ribosomal protein L22-2-like [Cucurbita moschata]2.1e-5896.03Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGD+VTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022960081.1 60S ribosomal protein L22-2-like [Cucurbita moschata]4.3e-5996.83Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKG +FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGDSVTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_022991268.1 60S ribosomal protein L22-2-like [Cucurbita maxima]4.3e-5996.03Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGD+VTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYEL+YFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

XP_023548993.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]1.9e-5996.83Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGD+VTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

TrEMBL top hitse value%identityAlignment
A0A0A0K637 Uncharacterized protein4.2e-6097.62Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGDSVTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A1S3BRQ9 60S ribosomal protein L22-24.2e-6097.62Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGDSVTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A5D3D2W6 60S ribosomal protein L22-2-like4.2e-6097.62Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGDSVTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A6J1DLK6 60S ribosomal protein L22-24.2e-6097.62Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGDSVTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

A0A6J1JVR1 60S ribosomal protein L22-2-like2.1e-5996.03Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGV+FVIDCAKPVEDKIMDIASLEKFLLERIKVGGK GALGD+VTVTR+KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKDRNVYEL+YFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

SwissProt top hitse value%identityAlignment
P13732 60S ribosomal protein L221.8e-3158.06Show/hide
Query:  RGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        +G   SG  K KK+ + F IDC  PVED IMD ++ E+FL ERIKV GKT  L  ++ + R+K+K+TV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A
Subjt:  RGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  SNKDRNVYELRYFNIAENEGEEED
        +NK+   YELRYF I +++ EEED
Subjt:  SNKDRNVYELRYFNIAENEGEEED

P47198 60S ribosomal protein L221.4e-3162.81Show/hide
Query:  ASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDS-VTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK
        A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GK G LG   VT+ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K
Subjt:  ASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDS-VTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK

Query:  DRNVYELRYFNIAENEGEEED
        +   YELRYF I ++E EEED
Subjt:  DRNVYELRYFNIAENEGEEED

Q9FE58 60S ribosomal protein L22-31.2e-5183.33Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA+   KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGK GALGDSV++TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENE EEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Q9M9W1 60S ribosomal protein L22-21.1e-5284.92Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGK GALGDSVT+TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Q9SRX7 Putative 60S ribosomal protein L22-12.5e-4169.05Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R  A S G   KKKGVSFVIDC+KPV+D I++IA+LEKFL ERIKV GK GALG+SV++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKD+NVYE+RYF I +     E+
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family1.8e-4269.05Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R  A S G   KKKGVSFVIDC+KPV+D I++IA+LEKFL ERIKV GK GALG+SV++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IASNKD+NVYE+RYF I +     E+
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT3G05560.1 Ribosomal L22e protein family7.6e-5484.92Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGK GALGDSVT+TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT3G05560.2 Ribosomal L22e protein family7.6e-5484.92Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGK GALGDSVT+TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT3G05560.3 Ribosomal L22e protein family7.6e-5484.92Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGK GALGDSVT+TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENEGEEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED

AT5G27770.1 Ribosomal L22e protein family8.4e-5383.33Show/hide
Query:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA+   KGKKKGVSF IDC+KPV+DKIM+IASLEKFL ERIKVGGK GALGDSV++TREK+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGEEED
        IA+NKDRN+YELRYFNIAENE EEED
Subjt:  IASNKDRNVYELRYFNIAENEGEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGTGGAGCAGCAGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGAGTGAGCTTCGTCATCGATTGTGCGAAGCCTGTCGAGGACAAGATCATGGATATCGCCTC
TTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAACTGGGGCACTAGGTGACTCCGTTACCGTCACTCGGGAAAAGAACAAGATCACCGTCAACTCCGATA
GCAACTTCTCCAAGAGGTATCTTAAATACTTGACTAAGAAGTATTTGAAGAAACACAATGTCAGAGATTGGCTTCGGGTTATTGCTTCAAACAAAGACCGCAACGTCTAT
GAATTGAGATACTTTAACATTGCTGAGAACGAGGGTGAGGAAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCGTGGAGCAGCAGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGAGTGAGCTTCGTCATCGATTGTGCGAAGCCTGTCGAGGACAAGATCATGGATATCGCCTC
TTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAACTGGGGCACTAGGTGACTCCGTTACCGTCACTCGGGAAAAGAACAAGATCACCGTCAACTCCGATA
GCAACTTCTCCAAGAGGTATCTTAAATACTTGACTAAGAAGTATTTGAAGAAACACAATGTCAGAGATTGGCTTCGGGTTATTGCTTCAAACAAAGACCGCAACGTCTAT
GAATTGAGATACTTTAACATTGCTGAGAACGAGGGTGAGGAAGAAGATTGA
Protein sequenceShow/hide protein sequence
MSRGAAASGGPKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKTGALGDSVTVTREKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY
ELRYFNIAENEGEEED