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Lag0002574 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002574
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionexopolygalacturonase-like
Genome locationchr4:43914204..43915238
RNA-Seq ExpressionLag0002574
SyntenyLag0002574
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575809.1 Exopolygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]6.4e-1456.38Show/hide
Query:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDL--NGKGGAVFDV
        MTT+ + SLFQ LLLV   QCCA VAA+F++     N + GI  T NQQ  P APP  LGIGTL  S G VA+N  KA +DL  NG G AVFDV
Subjt:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDL--NGKGGAVFDV

KAG7014351.1 Exopolygalacturonase-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-1456.38Show/hide
Query:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDL--NGKGGAVFDV
        MTT+ + SLFQ LLLV   QCCA VAA+F++     N + GI  T NQQ  P APP  LGIGTL  S G VA+N  KA +DL  NG G AVFDV
Subjt:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDL--NGKGGAVFDV

XP_022953910.1 exopolygalacturonase-like [Cucurbita moschata]1.4e-1355.32Show/hide
Query:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDL--NGKGGAVFDV
        MTT+ + SLFQ LLLV   QCCA VAA+F++     N + GI  T +QQ  P APP  LGIGTL  S G VA+N  KA +DL  NG G AVFDV
Subjt:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDL--NGKGGAVFDV

XP_038896336.1 exopolygalacturonase-like [Benincasa hispida]1.4e-1661.54Show/hide
Query:  TSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV
        T  S SLFQILLL F WQCCA VAAIF++  G  NLV G+  TVNQ L  P A P  LGIGTL    G+  VND+KA +DLNG GG+VFDV
Subjt:  TSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV

XP_038896337.1 exopolygalacturonase clone GBGE184-like [Benincasa hispida]6.8e-1661.8Show/hide
Query:  RSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV
        +S SLFQILLLV  WQCCA VAAI ++  G  NLV GI   VNQ+L  P A P++LGIGTL    G+  VND+KA  DLNG GGAVFDV
Subjt:  RSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV

TrEMBL top hitse value%identityAlignment
A0A0A0K588 Uncharacterized protein1.3e-0948.89Show/hide
Query:  SRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV
        +R+ SL QILLLVF WQCCA+V   F +  G  N + GI  T N+Q   PT  P+ LG  TL+   G+  VND+KA +DLN  G ++FDV
Subjt:  SRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV

A0A0A0K5I2 Uncharacterized protein1.2e-1050Show/hide
Query:  SRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV
        +R+FSL QILLLVF W+CCA  AAIF + +    L+ GI   VN+Q   P   P  LG  TL    G   VND+K  +DLN  GG VFDV
Subjt:  SRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV

A0A0A0K8F1 Uncharacterized protein3.0e-0948.89Show/hide
Query:  SRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV
        +R+ SL QILLLVF WQCCA+V   F++  G  N + GI  T N+Q   P   P+ LG  TL    G+  VND+KA + LN  GG+VFDV
Subjt:  SRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQL--PTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV

A0A6J1GQZ3 exopolygalacturonase-like6.9e-1455.32Show/hide
Query:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDL--NGKGGAVFDV
        MTT+ + SLFQ LLLV   QCCA VAA+F++     N + GI  T +QQ  P APP  LGIGTL  S G VA+N  KA +DL  NG G AVFDV
Subjt:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDL--NGKGGAVFDV

A0A6J1JX85 exopolygalacturonase-like6.9e-1455.43Show/hide
Query:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV
        MTT+R+ SLFQ LLLV   QCCA VAA+F++  G  NL+ GI  T NQQ  P A P  LGI T     GSVA+N  KA + L G G AVFDV
Subjt:  MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQ-LPTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACGTCAAGAAGTTTTAGCCTCTTCCAAATCCTTCTCTTGGTATTTGTTTGGCAATGTTGTGCAATGGTGGCTGCCATTTTCAACAACGACCTCGGTATTGTGAA
TCTCGTCGGCGGGATTGCATTGACGGTAAATCAGCAACTTCCTACAGCCCCTCCACAGGCTCTTGGTATCGGAACTCTGACAGGCAGTGACGGTAGTGTTGCAGTAAATG
ACGTTAAGGCCACTATTGATCTGAATGGGAAGGGTGGTGCAGTTTTTGATGTAGTTTTGGCTCAAGTGTCCCAATCCTGTAGTGAAGCTATAATATATGACCTAAGCTTG
AAAGTTCCAGGGAGTTATTCCTTCAGAGAATTTGATGAAGTCACTTGGTTGGAAGAGTTGACAGATAAATCATCATCAACATCATCATCTTCGTCTTCGTCGTCATCCTC
ATCGTCAGAAGAAATTTCTTCTCATGGAGTTGTTTTGGAGAAGATCAAGGGAGATGAAAAACTCATTGATATAGTTATATATATTGACGATAATGATGATGAGAATGGAG
AGAACGAAGAGAGTCATATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACGTCAAGAAGTTTTAGCCTCTTCCAAATCCTTCTCTTGGTATTTGTTTGGCAATGTTGTGCAATGGTGGCTGCCATTTTCAACAACGACCTCGGTATTGTGAA
TCTCGTCGGCGGGATTGCATTGACGGTAAATCAGCAACTTCCTACAGCCCCTCCACAGGCTCTTGGTATCGGAACTCTGACAGGCAGTGACGGTAGTGTTGCAGTAAATG
ACGTTAAGGCCACTATTGATCTGAATGGGAAGGGTGGTGCAGTTTTTGATGTAGTTTTGGCTCAAGTGTCCCAATCCTGTAGTGAAGCTATAATATATGACCTAAGCTTG
AAAGTTCCAGGGAGTTATTCCTTCAGAGAATTTGATGAAGTCACTTGGTTGGAAGAGTTGACAGATAAATCATCATCAACATCATCATCTTCGTCTTCGTCGTCATCCTC
ATCGTCAGAAGAAATTTCTTCTCATGGAGTTGTTTTGGAGAAGATCAAGGGAGATGAAAAACTCATTGATATAGTTATATATATTGACGATAATGATGATGAGAATGGAG
AGAACGAAGAGAGTCATATTGTTTGA
Protein sequenceShow/hide protein sequence
MTTSRSFSLFQILLLVFVWQCCAMVAAIFNNDLGIVNLVGGIALTVNQQLPTAPPQALGIGTLTGSDGSVAVNDVKATIDLNGKGGAVFDVVLAQVSQSCSEAIIYDLSL
KVPGSYSFREFDEVTWLEELTDKSSSTSSSSSSSSSSSSEEISSHGVVLEKIKGDEKLIDIVIYIDDNDDENGENEESHIV