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Lag0002578 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002578
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:43929659..43930786
RNA-Seq ExpressionLag0002578
SyntenyLag0002578
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575810.1 hypothetical protein SDJN03_26449, partial [Cucurbita argyrosperma subsp. sororia]4.3e-0646.88Show/hide
Query:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEEEYPKSIESEAKIYDQSLKVLVSYSFGEFDEV------TSKSCSKSCSSS
        S +T S+MLVKY+ +EDS FDE +TL TK   E ND+EN V+  YEEE  +  +SE  + ++   V  S+S  EFDE       T KS S S SSS
Subjt:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEEEYPKSIESEAKIYDQSLKVLVSYSFGEFDEV------TSKSCSKSCSSS

KAG7014352.1 hypothetical protein SDJN02_24529, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-0646.39Show/hide
Query:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEEEYPKSIESEAKIYDQSLKVLVSYSFGEFDEV------TSKSCSKSCSSSS
        S +T S+MLVKY+S +DS FDE +TL TK   E ND+EN V+  YEEE  +  +SE  + ++   V  S+S  EFDE       T KS S S +SSS
Subjt:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEEEYPKSIESEAKIYDQSLKVLVSYSFGEFDEV------TSKSCSKSCSSSS

XP_008451548.1 PREDICTED: uncharacterized protein LOC103492795 [Cucumis melo]1.2e-0541.22Show/hide
Query:  YTISEMLVKYASIEDSNFDENRTLMTKPFSETND-DENTVIIIY-EEEYPK----SIESEAKIYDQSLKVLVSY-SFGEFDEVTSKSCSKSCSSSSLVVR
        +T S+ML    SIEDS + EN  + T+   E  D +EN V+IIY EEEY      SIE+  + YD+S  V  S+ S   FDE   K  S + SSSS    
Subjt:  YTISEMLVKYASIEDSNFDENRTLMTKPFSETND-DENTVIIIY-EEEYPK----SIESEAKIYDQSLKVLVSY-SFGEFDEVTSKSCSKSCSSSSLVVR

Query:  RNFFSRSS---------FREDQGDGKIIDIIIYIDNDYENGENEETRI
         +  S  S          +E + D K IDIIIYID+D EN E E   I
Subjt:  RNFFSRSS---------FREDQGDGKIIDIIIYIDNDYENGENEETRI

XP_031744420.1 putative uncharacterized protein DDB_G0281733 [Cucumis sativus]2.3e-0744.2Show/hide
Query:  SIEDSNFDENRTLMTKPFSETNDDENTVIIIY-EEEYPKSIESE---AKIYDQSLKVLVSY-SFGEFDEVTSKSCSKSCSSSSLVVRRNFFSRSSFRED-
        SIEDS  DEN TL T+P  E  +++N VIIIY EEEY  S ES+    + YD+S +V  S+ S   FDE      S + SSSSL    +  S SS  E+ 
Subjt:  SIEDSNFDENRTLMTKPFSETNDDENTVIIIY-EEEYPKSIESE---AKIYDQSLKVLVSY-SFGEFDEVTSKSCSKSCSSSSLVVRRNFFSRSSFRED-

Query:  -----------QGDGKIIDIIIYIDNDYENGENEETRI
                    GD   IDIIIYID+D EN E++  RI
Subjt:  -----------QGDGKIIDIIIYIDNDYENGENEETRI

XP_038899634.1 uncharacterized G-patch domain protein DDB_G0278987-like [Benincasa hispida]2.2e-1547.18Show/hide
Query:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEE-EYPKS---IESEAKIYDQSLKVLVSYSFGEFDEVTSK------SCSKSCSSS
        S +T S M VKY SIEDS  +ENR LMT+   E   +EN V++IYEE EYP S   IE+E + Y++S KV  S+   EFD+   +      S S S SSS
Subjt:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEE-EYPKS---IESEAKIYDQSLKVLVSYSFGEFDEVTSK------SCSKSCSSS

Query:  SLVVRRNFFSRSSF-REDQGDGKIIDIIIYIDNDYENGENEE
        S       FS   F +E  GD K +DI+IYID+D ENGE+E+
Subjt:  SLVVRRNFFSRSSF-REDQGDGKIIDIIIYIDNDYENGENEE

TrEMBL top hitse value%identityAlignment
A0A1S3BRP4 uncharacterized protein LOC1034927956.0e-0641.22Show/hide
Query:  YTISEMLVKYASIEDSNFDENRTLMTKPFSETND-DENTVIIIY-EEEYPK----SIESEAKIYDQSLKVLVSY-SFGEFDEVTSKSCSKSCSSSSLVVR
        +T S+ML    SIEDS + EN  + T+   E  D +EN V+IIY EEEY      SIE+  + YD+S  V  S+ S   FDE   K  S + SSSS    
Subjt:  YTISEMLVKYASIEDSNFDENRTLMTKPFSETND-DENTVIIIY-EEEYPK----SIESEAKIYDQSLKVLVSY-SFGEFDEVTSKSCSKSCSSSSLVVR

Query:  RNFFSRSS---------FREDQGDGKIIDIIIYIDNDYENGENEETRI
         +  S  S          +E + D K IDIIIYID+D EN E E   I
Subjt:  RNFFSRSS---------FREDQGDGKIIDIIIYIDNDYENGENEETRI

A0A6J1GP08 uncharacterized protein LOC1114561641.7e-0544.79Show/hide
Query:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEEEYPKSIESEAKIYDQSLKVLVSYSFGEFDEV-----TSKSCSKSCSSSS
        S +T S+MLVKY+ +EDS  DE +TL TK   + ND+EN V+  YEEE  +  +SE  + ++   V  S+S  EFDE      T KS S S +SSS
Subjt:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEEEYPKSIESEAKIYDQSLKVLVSYSFGEFDEV-----TSKSCSKSCSSSS

A0A6J1JQ73 uncharacterized protein LOC1114879565.1e-0545.36Show/hide
Query:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEEEYPKSIESEAKIYDQSLKVLVSYSFGEFDEV------TSKSCSKSCSSSS
        S Y  S+MLVKY+ +EDS  DE +TL TK   E ND+EN V+  YEEE  +  +SE  + +    V  S+S  EFDE       T KS S S +SSS
Subjt:  SSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEEEYPKSIESEAKIYDQSLKVLVSYSFGEFDEV------TSKSCSKSCSSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCGACCAGGAAAAATCAAGCTCCGACCTCAAGCGGGCAGACAAACCAGCCAACAAGAAGTACGTCGAGAACGACTATGGTGTATCAAGCTACACAATCTCCGA
AATGTTGGTGAAATATGCTTCAATAGAAGATTCCAACTTCGACGAAAATCGAACTCTAATGACGAAACCCTTCTCAGAAACAAATGACGACGAAAATACTGTGATTATTA
TTTATGAAGAAGAGTACCCAAAATCTATAGAAAGTGAAGCTAAAATATATGACCAAAGCTTGAAAGTTCTAGTGAGTTATTCCTTTGGAGAGTTTGATGAAGTCACTTCG
AAATCATGTTCGAAATCATGTTCATCTTCATCCCTCGTCGTCAGAAGAAACTTCTTTTCAAGGAGTTCTTTTCGAGAAGATCAAGGGGATGGAAAAATCATCGATATAAT
TATATATATTGACAATGATTATGAGAATGGAGAGAACGAAGAGACTCGAATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCCGACCAGGAAAAATCAAGCTCCGACCTCAAGCGGGCAGACAAACCAGCCAACAAGAAGTACGTCGAGAACGACTATGGTGTATCAAGCTACACAATCTCCGA
AATGTTGGTGAAATATGCTTCAATAGAAGATTCCAACTTCGACGAAAATCGAACTCTAATGACGAAACCCTTCTCAGAAACAAATGACGACGAAAATACTGTGATTATTA
TTTATGAAGAAGAGTACCCAAAATCTATAGAAAGTGAAGCTAAAATATATGACCAAAGCTTGAAAGTTCTAGTGAGTTATTCCTTTGGAGAGTTTGATGAAGTCACTTCG
AAATCATGTTCGAAATCATGTTCATCTTCATCCCTCGTCGTCAGAAGAAACTTCTTTTCAAGGAGTTCTTTTCGAGAAGATCAAGGGGATGGAAAAATCATCGATATAAT
TATATATATTGACAATGATTATGAGAATGGAGAGAACGAAGAGACTCGAATTGTTTGA
Protein sequenceShow/hide protein sequence
MSSDQEKSSSDLKRADKPANKKYVENDYGVSSYTISEMLVKYASIEDSNFDENRTLMTKPFSETNDDENTVIIIYEEEYPKSIESEAKIYDQSLKVLVSYSFGEFDEVTS
KSCSKSCSSSSLVVRRNFFSRSSFREDQGDGKIIDIIIYIDNDYENGENEETRIV