; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002593 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002593
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAnkyrin repeat protein
Genome locationchr4:44052727..44053844
RNA-Seq ExpressionLag0002593
SyntenyLag0002593
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.3e-1744.06Show/hide
Query:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI
        TF D T VV+  LNH FSF AFG    G   V G+I S+V  Q   EAP  IAP+GL+T +NK+ KA S+ L+I K IKG   +S+ HE +   G N+  
Subjt:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI

Query:  SYGGKISPKNRGNVFSHG----IGATKSSNNVVVSHGVRTKKN
        S+GGK+S K++G+V         G   + NN  +S GV+ KK+
Subjt:  SYGGKISPKNRGNVFSHG----IGATKSSNNVVVSHGVRTKKN

KAA0048677.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.0e-1437.23Show/hide
Query:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAP-RIAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI
        TF+D T VV+  LNH FSF AFG    G   V GSI S+V  Q   EAP  IAP+GLETP+NK +K  S   +I K IKG   VS+ HE     G N+  
Subjt:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAP-RIAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI

Query:  SYGGKISPKNRGNVFS------HGIGATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVSHG
        SY GK+S K++ +V        +G+ +  ++  + +  GV  KK+       H     ++  K  +    S      +   NV VSHG
Subjt:  SYGGKISPKNRGNVFS------HGIGATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVSHG

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]8.4e-2545.95Show/hide
Query:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI
        TFNDVT VV+LDLNHHFSF  FG    G     GS+AS+V+  +  EAP  IAP+GL+TP+NK +K  +FGLEI K I+  + VS  HEI+ K G N+ +
Subjt:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI

Query:  SYGGKISPKNRGNV---FSHGIGATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVSHG
        S+GGKIS K +G V    + G    KSS NV+VSHG  T  + NN   S G    +  +K     V S      +   N  VSHG
Subjt:  SYGGKISPKNRGNV---FSHGIGATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVSHG

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]2.9e-1742.94Show/hide
Query:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IK-GDITVSHGHEISTKRGINVV
        TF+D T VV+  LNH FSF AFG    G   V GSI S+V+ Q   EAP  IAP+GLET +NK++K  S+ L+I K IK G   VSH HE +   G N+ 
Subjt:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IK-GDITVSHGHEISTKRGINVV

Query:  ISYGGKISPKNRGNVFSHGIG-----ATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRK
         S+GGK+S K++G+V     G       K  N   +S GV  KK+       HG    L+  K
Subjt:  ISYGGKISPKNRGNVFSHGIG-----ATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRK

XP_022960412.1 uncharacterized protein LOC111461146 [Cucurbita moschata]4.8e-1237.43Show/hide
Query:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPRIAPIGLETPMNKDNKALSFGLEIPKIKGDITVSHGHEISTKRGINVVISY
        TFNDVT V+    NH FSF +FG H  GI K          +QSP  +           + KD      G E+PKI G    S GHEI  KRG N+V SY
Subjt:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPRIAPIGLETPMNKDNKALSFGLEIPKIKGDITVSHGHEISTKRGINVVISY

Query:  GGKISPKN------RGNVFSHGIGA---------TKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDN
        GGKI P         G   S  +GA          KSS+NVV SHG      D       G + DL   KS+   V SHS   +  N
Subjt:  GGKISPKN------RGNVFSHGIGA---------TKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDN

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein4.1e-2545.95Show/hide
Query:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI
        TFNDVT VV+LDLNHHFSF  FG    G     GS+AS+V+  +  EAP  IAP+GL+TP+NK +K  +FGLEI K I+  + VS  HEI+ K G N+ +
Subjt:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI

Query:  SYGGKISPKNRGNV---FSHGIGATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVSHG
        S+GGKIS K +G V    + G    KSS NV+VSHG  T  + NN   S G    +  +K     V S      +   N  VSHG
Subjt:  SYGGKISPKNRGNV---FSHGIGATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVSHG

A0A0A0K7W7 Uncharacterized protein6.3e-1839.78Show/hide
Query:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IK-GDITVSHGHEISTKRGINVV
        TF+D T VV+  LNH FSF AFG    G   V GSI S+V  Q   EAP  IAP+GLET +NK++K  S+ L+I K IK G   VSH HE +   G N+ 
Subjt:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IK-GDITVSHGHEISTKRGINVV

Query:  ISYGGKISPKNRGNVFSHGIG-----ATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVS
         S+GGK+S K++G+V     G       K  N   +S GV  KK+       HG    L+  K    + +SH        GN++++
Subjt:  ISYGGKISPKNRGNVFSHGIG-----ATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVS

A0A0A0KAZ8 Uncharacterized protein3.3e-1939.47Show/hide
Query:  MASVTFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IK-GDITVSHGHEISTKRG
        + S TF+D T VV+  LNH FSF AFG    G   V GSI S+V+ Q   EAP  IAP+GLET +NK++K  S+ L+I K IK G   VSH HE +   G
Subjt:  MASVTFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IK-GDITVSHGHEISTKRG

Query:  INVVISYGGKISPKNRGNVFSHGIG-----ATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQD-NGNVNV
         N+  S+GGK+S K++G+V     G       K  N   +S GV  KK+       HG    L+  K    + +SH    + +  G++N+
Subjt:  INVVISYGGKISPKNRGNVFSHGIG-----ATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQD-NGNVNV

A0A5A7U057 Ankyrin repeat protein6.3e-1844.06Show/hide
Query:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI
        TF D T VV+  LNH FSF AFG    G   V G+I S+V  Q   EAP  IAP+GL+T +NK+ KA S+ L+I K IKG   +S+ HE +   G N+  
Subjt:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPR-IAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI

Query:  SYGGKISPKNRGNVFSHG----IGATKSSNNVVVSHGVRTKKN
        S+GGK+S K++G+V         G   + NN  +S GV+ KK+
Subjt:  SYGGKISPKNRGNVFSHG----IGATKSSNNVVVSHGVRTKKN

A0A5A7U318 Ankyrin repeat protein5.0e-1537.23Show/hide
Query:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAP-RIAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI
        TF+D T VV+  LNH FSF AFG    G   V GSI S+V  Q   EAP  IAP+GLETP+NK +K  S   +I K IKG   VS+ HE     G N+  
Subjt:  TFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAP-RIAPIGLETPMNKDNKALSFGLEIPK-IKGDITVSHGHEISTKRGINVVI

Query:  SYGGKISPKNRGNVFS------HGIGATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVSHG
        SY GK+S K++ +V        +G+ +  ++  + +  GV  KK+       H     ++  K  +    S      +   NV VSHG
Subjt:  SYGGKISPKNRGNVFS------HGIGATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVSHG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGTGTCACTTTCAACGATGTCACTAGTGTTGTTGATCTCGACCTCAATCATCATTTTTCCTTCTGTGCATTTGGATCACATGGTTTCGGGATCCTAAAAGTTGG
TGGTAGTATTGCATCAAGTGTAGACATGCAGAGTCCTACCGAAGCACCACGGATTGCCCCCATTGGACTTGAAACTCCAATGAACAAAGACAATAAAGCTTTGTCTTTTG
GTCTCGAAATTCCCAAGATCAAGGGTGACATAACTGTTTCTCATGGTCATGAAATAAGTACGAAGAGGGGCATCAACGTTGTTATTTCCTATGGTGGAAAAATTAGTCCG
AAGAATAGAGGCAATGTTTTTTCTCATGGTATTGGAGCTACAAAGAGTAGCAACAACGTTGTTGTTTCTCATGGTGTTCGAACTAAAAAGAACGACAACAACGTTGTTTT
CTCTCATGGTCCTAGACATGATCTTAGAACTAGAAAGAGCACCAGCAAACTTGTTCTTTCTCATAGCTTCACAACTACACAGGACAACGGCAATGTTAATGTTTCTCATG
GTCTCAAAACTCAAAGTACTGTGGAAGTTGACCATCTGCAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGTGTCACTTTCAACGATGTCACTAGTGTTGTTGATCTCGACCTCAATCATCATTTTTCCTTCTGTGCATTTGGATCACATGGTTTCGGGATCCTAAAAGTTGG
TGGTAGTATTGCATCAAGTGTAGACATGCAGAGTCCTACCGAAGCACCACGGATTGCCCCCATTGGACTTGAAACTCCAATGAACAAAGACAATAAAGCTTTGTCTTTTG
GTCTCGAAATTCCCAAGATCAAGGGTGACATAACTGTTTCTCATGGTCATGAAATAAGTACGAAGAGGGGCATCAACGTTGTTATTTCCTATGGTGGAAAAATTAGTCCG
AAGAATAGAGGCAATGTTTTTTCTCATGGTATTGGAGCTACAAAGAGTAGCAACAACGTTGTTGTTTCTCATGGTGTTCGAACTAAAAAGAACGACAACAACGTTGTTTT
CTCTCATGGTCCTAGACATGATCTTAGAACTAGAAAGAGCACCAGCAAACTTGTTCTTTCTCATAGCTTCACAACTACACAGGACAACGGCAATGTTAATGTTTCTCATG
GTCTCAAAACTCAAAGTACTGTGGAAGTTGACCATCTGCAATGGTGA
Protein sequenceShow/hide protein sequence
MASVTFNDVTSVVDLDLNHHFSFCAFGSHGFGILKVGGSIASSVDMQSPTEAPRIAPIGLETPMNKDNKALSFGLEIPKIKGDITVSHGHEISTKRGINVVISYGGKISP
KNRGNVFSHGIGATKSSNNVVVSHGVRTKKNDNNVVFSHGPRHDLRTRKSTSKLVLSHSFTTTQDNGNVNVSHGLKTQSTVEVDHLQW