; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002618 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002618
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionH15 domain-containing protein
Genome locationchr4:44294109..44294693
RNA-Seq ExpressionLag0002618
SyntenyLag0002618
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3970275.1 hypothetical protein CMV_006013 [Castanea mollissima]1.4e-2850Show/hide
Query:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------
        N  S+   HPPYFEMIS+AIS LK R GSSQ+AI+K I++KYK+ LP  F+K LSVQ+KK V++ERL+++ NSFK++  E Q ++G+             
Subjt:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------

Query:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN
              KG KTKRL+QV+TPE K    A A   KMK+LSQV+TPEG K+K++L   K  +AS N
Subjt:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN

KAG8477625.1 hypothetical protein CXB51_030211 [Gossypium anomalum]7.5e-2748.54Show/hide
Query:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE
        M KA P   +  N   A HPPY EMI +AIS LK R GSSQ AI+K +EEKY + LPP F+K LSVQ+KKLV++E+L+++ NS+KIS  EK     +E +
Subjt:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE

Query:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK
        +RKG                      KTKRLSQV+TPE     K     A  G K+K+LSQV+TPEG KRK
Subjt:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK

XP_023894854.1 histone H1-like [Quercus suber]2.3e-2850Show/hide
Query:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------
        N  S+S  HPPYFEMIS+AI  LK R GSSQ AI+K I++KYK+ LP  F+K LSVQ+KK V++ERL+++ NSFK++  E Q ++G+             
Subjt:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------

Query:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN
              KG KTKRL+QV+TPE K    A A   KMK+LSQV+TPEG K+K++L   K  +AS N
Subjt:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN

XP_023913227.1 histone H1-like [Quercus suber]2.3e-2850Show/hide
Query:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------
        N  S+S  HPPYFEMIS+AI  LK R GSSQ AI+K I++KYK+ LP  F+K LSVQ+KK V++ERL+++ NSFK++  E Q ++G+             
Subjt:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------

Query:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN
              KG KTKRL+QV+TPE K    A A   KMK+LSQV+TPEG K+K++L   K  +AS N
Subjt:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN

XP_030947921.1 histone H1-like [Quercus lobata]1.5e-2748.78Show/hide
Query:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------
        N  S+S  HPPYFEMIS+AI  LK R GSSQ AI+K I++KYK+ LP  F+  LSVQ+KK V++ERL+++ NS+K++  E Q ++G+             
Subjt:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------

Query:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN
              KG KTKRL+QV+TPE K    A A   KMK+LSQV+TPEG K+K++L   K  +AS N
Subjt:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN

TrEMBL top hitse value%identityAlignment
A0A0D2P7X6 H15 domain-containing protein4.7e-2748.54Show/hide
Query:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE
        M KA P   +  N   A HPPY EMI +AIS LK R GSSQ AI+K +EEKY + LPP F+K LSVQ+KKLV++E+L+++ NS+KIS  EK     +E +
Subjt:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE

Query:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK
        +RKG                      KTKRLSQV+TPE     K     A  G K+K+LSQV+TPEG KRK
Subjt:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK

A0A2P5WVQ6 H15 domain-containing protein6.2e-2748.54Show/hide
Query:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE
        M KA P   +  N   A HPPY EMI +AIS LK R GSSQ AI+K +EEKY + LPP F+K LSVQ+KKLV++E+L+++ NS+KIS  EK     +E +
Subjt:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE

Query:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK
        +RKG                      KTKRLSQV+TPE     K     A  G K+K+LSQV+TPEG KRK
Subjt:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK

A0A7J8RV88 H15 domain-containing protein4.7e-2748.54Show/hide
Query:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE
        M KA P   +  N   A HPPY EMI +AIS LK R GSSQ AI+K +EEKY + LPP F+K LSVQ+KKLV++E+L+++ NS+KIS  EK     +E +
Subjt:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE

Query:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK
        +RKG                      KTKRLSQV+TPE     K     A  G K+K+LSQV+TPEG KRK
Subjt:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK

A0A7J8UR57 H15 domain-containing protein4.7e-2748.54Show/hide
Query:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE
        M KA P   +  N   A HPPY EMI +AIS LK R GSSQ AI+K +EEKY + LPP F+K LSVQ+KKLV++E+L+++ NS+KIS  EK     +E +
Subjt:  MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGE

Query:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK
        +RKG                      KTKRLSQV+TPE     K     A  G K+K+LSQV+TPEG KRK
Subjt:  KRKGG---------------------KTKRLSQVRTPE----GKTPPSAAAVGGKMKKLSQVRTPEGFKRK

A0A7N2N4S4 H15 domain-containing protein7.3e-2848.78Show/hide
Query:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------
        N  S+S  HPPYFEMIS+AI  LK R GSSQ AI+K I++KYK+ LP  F+  LSVQ+KK V++ERL+++ NS+K++  E Q ++G+             
Subjt:  NFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGE-------------

Query:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN
              KG KTKRL+QV+TPE K    A A   KMK+LSQV+TPEG K+K++L   K  +AS N
Subjt:  ----KRKGGKTKRLSQVRTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGN

SwissProt top hitse value%identityAlignment
P23444 Histone H16.8e-1540.15Show/hide
Query:  SSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGEKRKGGKTKRLSQVR
        +S  H PY EM+S+AI+ LK R GSS  AI+K +E+K+K  LPP FRK L+VQ+KKLV   +L +V NS+K+S A K   + +   K+     K+     
Subjt:  SSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK---QTEEGEKRKGGKTKRLSQVR

Query:  TPEGKTPPSAAAV-----GGKMKKLSQVRTPEGFKRK
         P+ KTP  A          K K + + +TP   K K
Subjt:  TPEGKTPPSAAAV-----GGKMKKLSQVRTPEGFKRK

P26568 Histone H1.11.4e-1238.62Show/hide
Query:  HPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRLSQVRTPEGKTP
        HP Y EMI DAI  LK R GSSQ AI K IEEK KE LPPTFRK L + +K+LV + +L++V  SFK+  A          K    K  ++   P  K P
Subjt:  HPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRLSQVRTPEGKTP

Query:  PSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGNGKEQKR
         + A    K K  +  +  +    K      K  TA    K   R
Subjt:  PSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGNGKEQKR

P26569 Histone H1.21.2e-1447.5Show/hide
Query:  PTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRL
        PT    +SS  HP Y EMI DAI  LK R GSSQ AI K IEEK+K SLPPTFRK L V +K+LV +E+L++V  SFKI  A  ++    K      K+ 
Subjt:  PTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRL

Query:  SQVRTPEGKTPPSAAAVGGK
        + V  P+GK   + A    K
Subjt:  SQVRTPEGKTPPSAAAVGGK

P37218 Histone H18.9e-1543.8Show/hide
Query:  SSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKIS----------PAEKQTEEGEKRKGGK
        S++  HPPYFEMI DAI  LK R GSSQ AI+K IEEK K SLP  F+K L  Q+KK V +E+L++V NS+K+           PA+K+    + +   K
Subjt:  SSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKIS----------PAEKQTEEGEKRKGGK

Query:  TKRLSQVRT-PEGKTPPSAAA
         K   + +  P  K  P+A A
Subjt:  TKRLSQVRT-PEGKTPPSAAA

Q9M5W4 Histone H11.7e-1340.16Show/hide
Query:  NSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRLSQVRT
        +  ++ HP +FEMISDAIS LK R GSSQ AI+K +E+K+K+ LP  FRK L   +KKLV + +L++V NSFK+  A         +K         +  
Subjt:  NSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRLSQVRT

Query:  PEGKTPPSAAAVGGKMKKLSQV
        P+    P  A +G K K  ++V
Subjt:  PEGKTPPSAAAVGGKMKKLSQV

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein1.0e-1338.62Show/hide
Query:  HPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRLSQVRTPEGKTP
        HP Y EMI DAI  LK R GSSQ AI K IEEK KE LPPTFRK L + +K+LV + +L++V  SFK+  A          K    K  ++   P  K P
Subjt:  HPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRLSQVRTPEGKTP

Query:  PSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGNGKEQKR
         + A    K K  +  +  +    K      K  TA    K   R
Subjt:  PSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGNGKEQKR

AT2G18050.1 histone H1-37.0e-1534.25Show/hide
Query:  KALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK-----QTEEGE
        K  P         +  HPPYF+MI +A+  LK +NGSS  AI+K IEEK+K  LP +FRKTLS+Q+K  V   +L+++  S+K+S   K     Q ++ +
Subjt:  KALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK-----QTEEGE

Query:  KRKGGKTKRLSQVRTPEGKTPPSAAAVG--GKMKKLSQVRTPEGFK
        K    + K +++        P    +V    K +K+ + R P+  K
Subjt:  KRKGGKTKRLSQVRTPEGKTPPSAAAVG--GKMKKLSQVRTPEGFK

AT2G18050.2 histone H1-31.0e-1034.68Show/hide
Query:  MISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK-----QTEEGEKRKGGKTKRLSQVRTPEGKTPP
        MI +A+  LK +NGSS  AI+K IEEK+K  LP +FRKTLS+Q+K  V   +L+++  S+K+S   K     Q ++ +K    + K +++        P 
Subjt:  MISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEK-----QTEEGEKRKGGKTKRLSQVRTPEGKTPP

Query:  SAAAVG--GKMKKLSQVRTPEGFK
           +V    K +K+ + R P+  K
Subjt:  SAAAVG--GKMKKLSQVRTPEGFK

AT2G30620.1 winged-helix DNA-binding transcription factor family protein8.3e-1647.5Show/hide
Query:  PTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRL
        PT    +SS  HP Y EMI DAI  LK R GSSQ AI K IEEK+K SLPPTFRK L V +K+LV +E+L++V  SFKI  A  ++    K      K+ 
Subjt:  PTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRL

Query:  SQVRTPEGKTPPSAAAVGGK
        + V  P+GK   + A    K
Subjt:  SQVRTPEGKTPPSAAAVGGK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein1.2e-1443.84Show/hide
Query:  PTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKI------------SPAEKQTEE
        PT    +SS  HP Y EMI DAI  LK R GSSQ AI K IEEK+K SLPPTFRK L V +K+LV +E+L++V  SFKI            +P +K+   
Subjt:  PTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKI------------SPAEKQTEE

Query:  GEKRKGGKTKRLSQVRTPEGK---TPPSAAAVGGKM-KKLSQVRTP
          K K  +T      RT  GK    P    AV  K   K  +V++P
Subjt:  GEKRKGGKTKRLSQVRTPEGK---TPPSAAAVGGKM-KKLSQVRTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAAGCACTTCCAACTCCAACCAATAATTTCAATTCCAGTTCTGCCCATCACCCACCCTACTTCGAGATGATCAGCGACGCAATTTCGAGACTCAAGCACCGGAA
CGGATCGAGCCAAGAAGCAATTTCAAAGCTAATCGAGGAAAAGTACAAGGAATCGCTTCCACCCACTTTCAGAAAAACGCTCTCTGTTCAGATTAAGAAGTTGGTCAGAA
CAGAGAGGCTGATCGAAGTCAACAACTCCTTCAAGATTTCTCCTGCAGAGAAGCAGACAGAAGAGGGGGAGAAGAGGAAAGGGGGAAAAACGAAGAGGCTCAGCCAGGTC
AGGACGCCGGAAGGGAAGACGCCGCCGTCTGCGGCGGCGGTGGGTGGGAAGATGAAGAAGCTGAGTCAGGTGAGGACGCCTGAAGGATTTAAGAGGAAGAGGGATTTGGA
TTTGGGGAAATTGTCGACTGCAAGTGGAAATGGAAAGGAACAAAAAAGGAGGAGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAAGCACTTCCAACTCCAACCAATAATTTCAATTCCAGTTCTGCCCATCACCCACCCTACTTCGAGATGATCAGCGACGCAATTTCGAGACTCAAGCACCGGAA
CGGATCGAGCCAAGAAGCAATTTCAAAGCTAATCGAGGAAAAGTACAAGGAATCGCTTCCACCCACTTTCAGAAAAACGCTCTCTGTTCAGATTAAGAAGTTGGTCAGAA
CAGAGAGGCTGATCGAAGTCAACAACTCCTTCAAGATTTCTCCTGCAGAGAAGCAGACAGAAGAGGGGGAGAAGAGGAAAGGGGGAAAAACGAAGAGGCTCAGCCAGGTC
AGGACGCCGGAAGGGAAGACGCCGCCGTCTGCGGCGGCGGTGGGTGGGAAGATGAAGAAGCTGAGTCAGGTGAGGACGCCTGAAGGATTTAAGAGGAAGAGGGATTTGGA
TTTGGGGAAATTGTCGACTGCAAGTGGAAATGGAAAGGAACAAAAAAGGAGGAGGAAGTGA
Protein sequenceShow/hide protein sequence
MGKALPTPTNNFNSSSAHHPPYFEMISDAISRLKHRNGSSQEAISKLIEEKYKESLPPTFRKTLSVQIKKLVRTERLIEVNNSFKISPAEKQTEEGEKRKGGKTKRLSQV
RTPEGKTPPSAAAVGGKMKKLSQVRTPEGFKRKRDLDLGKLSTASGNGKEQKRRRK