; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0002619 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002619
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr4:44302443..44302913
RNA-Seq ExpressionLag0002619
SyntenyLag0002619
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046672.1 extensin-2 [Cucumis melo var. makuwa]3.0e-5477.36Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQL--PPPPPPVVDCPPPPSPLP---PPPPVPTSECPPPPAPPSCDSCVYPSPPPP
        MAN + I LT FLFSL KFS  SSA+AVAKDQ  CSMCS CDNPCQL  PPPPPPVV+CPPPPSP P   PPPP+PTS+CPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQL--PPPPPPVVDCPPPPSPLP---PPPPVPTSECPPPPAPPSCDSCVYPSPPPP

Query:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL
        SS+ PYPP+DGGQFPG+APPPPNPILPY+PYYYYSPPSAS KSV FSW++ PL F II+
Subjt:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL

KAG6575794.1 hypothetical protein SDJN03_26433, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4771.7Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLP-----PPPPVPTSECPPPPAPPSCDSCVYPSPPPP
        MA+L SI LTLFL SLSKF SPSSAT  A+DQ  CSMC++CDNPCQLPPPPP +VDCPPPPSP P     PPPP+PT ECPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLP-----PPPPVPTSECPPPPAPPSCDSCVYPSPPPP

Query:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL
         +     P DGGQ+PG+APPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL

XP_022953998.1 leucine-rich repeat extensin-like protein 3 [Cucurbita moschata]3.8e-4973.58Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVP-----TSECPPPPAPPSCDSCVYPSPPPP
        MA+L SI LTLFL SLSKFS  SS T  A+DQ  CSMC++CDNPCQLPPPPP +VDCPPPPSP PPPPP P     T ECPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVP-----TSECPPPPAPPSCDSCVYPSPPPP

Query:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL
        SSI PY P DGGQ+PG+APPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL

XP_022991777.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]1.0e-4975.47Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPP-----VVDCPPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPP
        MA+L SI LTLFLFSLSKFS  S AT  A+DQ  CSMCS+CDNPCQLPPPPPP     VVDCPPPPS  PPPPP+P  ECPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPP-----VVDCPPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPP

Query:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL
        SSI PY P DGGQ+PGVAPPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL

XP_023549397.1 leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]2.3e-4975.48Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDC-PPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPPSSIM
        MA+L SI LTLFL SLSKFS  SSAT  A+DQ  CSMCS+CDNPCQLPPPPP +VDC PPPP P  PPPP+PT ECPPPP+PPSCD+CVYPSPPPPSSI 
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDC-PPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPPSSIM

Query:  PYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL
        PY P DGGQ+PG+APPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  PYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL

TrEMBL top hitse value%identityAlignment
A0A0A0K5N4 Uncharacterized protein2.8e-5378.62Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQL--PPPPPPVVDC-PPPPSPLP--PPPPVPTSECPPPPAPPSCDSCVYPSPPPP
        MANL+SI LT FL SL+KFS  SSATAVAKDQ  CSMCSTCDNPCQL  PPPPPPVV+C PPPPSP P  PPPP+PTS+CPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQL--PPPPPPVVDC-PPPPSPLP--PPPPVPTSECPPPPAPPSCDSCVYPSPPPP

Query:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL
        SS+ PYPP+ GGQFPG+APPPPNPILPY+PYYYYSPPSAS KSV FSW+   L F IIL
Subjt:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL

A0A5D3D2P5 Extensin-21.5e-5477.36Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQL--PPPPPPVVDCPPPPSPLP---PPPPVPTSECPPPPAPPSCDSCVYPSPPPP
        MAN + I LT FLFSL KFS  SSA+AVAKDQ  CSMCS CDNPCQL  PPPPPPVV+CPPPPSP P   PPPP+PTS+CPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQL--PPPPPPVVDCPPPPSPLP---PPPPVPTSECPPPPAPPSCDSCVYPSPPPP

Query:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL
        SS+ PYPP+DGGQFPG+APPPPNPILPY+PYYYYSPPSAS KSV FSW++ PL F II+
Subjt:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL

A0A6J1GPW6 leucine-rich repeat extensin-like protein 31.9e-4973.58Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVP-----TSECPPPPAPPSCDSCVYPSPPPP
        MA+L SI LTLFL SLSKFS  SS T  A+DQ  CSMC++CDNPCQLPPPPP +VDCPPPPSP PPPPP P     T ECPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVP-----TSECPPPPAPPSCDSCVYPSPPPP

Query:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL
        SSI PY P DGGQ+PG+APPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL

A0A6J1H7D0 glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like2.4e-4467.52Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPPSSIMP
        MANL+SI  T  LF+  KFS  SSATAVAKDQ  CSMCS+CDNPCQLPPP              PPPPP PTS+CPPPP PPSC +C++PSP PPSS+ P
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPPSSIMP

Query:  YPPADGGQFPGVA-PPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIILCL
        Y PADG QFPG+A PPPPNPILPYYPYYYYSPP+ASG+ VS SW++ PLG  II+CL
Subjt:  YPPADGGQFPGVA-PPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIILCL

A0A6J1JMT5 leucine-rich repeat extensin-like protein 34.9e-5075.47Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPP-----VVDCPPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPP
        MA+L SI LTLFLFSLSKFS  S AT  A+DQ  CSMCS+CDNPCQLPPPPPP     VVDCPPPPS  PPPPP+P  ECPPPP+PPSCD+CVYPSPPPP
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPP-----VVDCPPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPP

Query:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL
        SSI PY P DGGQ+PGVAPPPPNPILPY+PYYYY+PPS SGKSV FSW+  PL F + L
Subjt:  SSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06750.1 hydroxyproline-rich glycoprotein family protein1.3e-1038.46Show/hide
Query:  AKDQT-SCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPAPPSC--DSCVYPSPPPPSSI--MPYPPADGGQFPG-----------V
        +KD+T SC+MCS+CDNPC                       PVP+S  PPPP P S       Y SPPPPSS   + YPP  GG   G            
Subjt:  AKDQT-SCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPAPPSC--DSCVYPSPPPPSSI--MPYPPADGGQFPG-----------V

Query:  APPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIILC
         PPPPNPI+PY+P+YY++PP     S      +    F ++LC
Subjt:  APPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIILC

AT3G22800.1 Leucine-rich repeat (LRR) family protein3.1e-0450.53Show/hide
Query:  CSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPPSSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPP
        CS    P   PPPPPP    PPPP P PPPPP P     PPP PPS    VYP PPPP  + P PP+    +P   PPPP+P     PY Y SPP
Subjt:  CSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPPSSIMPYPPADGGQFPGVAPPPPNPILPYYPYYYYSPP

AT4G16140.1 proline-rich family protein7.5e-1139.88Show/hide
Query:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPA----------PPSCDSCVYP
        M    +  L LF F  +  ++ +S + +A     C+MC++CDNPCQ  P PP     PPP +P PPPP   T+ CPPPP+          PP+  S  Y 
Subjt:  MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPA----------PPSCDSCVYP

Query:  SPPPPSSIMPY--PPADGGQFPGVAPPPPNPILPYYPYYYYSPP-----SASGKSVSFSWEVWPLGFFIILCL
         PP  SS   Y  PP  GG +P    PPPNPI+PY+P+YYY+PP     S S   + FS+ V    F +I  L
Subjt:  SPPPPSSIMPY--PPADGGQFPGVAPPPPNPILPYYPYYYYSPP-----SASGKSVSFSWEVWPLGFFIILCL

AT5G49280.1 hydroxyproline-rich glycoprotein family protein5.0e-1544.97Show/hide
Query:  TAVAKDQ-TSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPAPPSC---DSCVYPSP---------PPP----SSIMPYPPADGGQ
        T  +KD+  SC+MCS+CDNPC       PV   PPPPS  PPPP  PT+ CPPPP+PPS     S  YP P         PPP         YPP   G 
Subjt:  TAVAKDQ-TSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPAPPSC---DSCVYPSP---------PPP----SSIMPYPPADGGQ

Query:  FPGVAPPPPNPILPYYPYYYYSPPSASGKS-VSFSWEVWPLGFFIILCL
        +P   PPPPNPI+PY+P+YY++PP  SG      S+ +    F + LCL
Subjt:  FPGVAPPPPNPILPYYPYYYYSPPSASGKS-VSFSWEVWPLGFFIILCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATCTCCTCTCCATTTCCCTCACCCTCTTCCTCTTTTCACTCTCCAAATTTTCCTCTCCCTCCTCGGCAACCGCCGTCGCCAAGGATCAGACCAGCTGTTCGAT
GTGCTCAACTTGCGACAATCCCTGCCAACTTCCGCCGCCTCCGCCGCCAGTGGTTGATTGCCCGCCTCCTCCCTCGCCGCTGCCCCCTCCACCGCCAGTCCCCACTTCCG
AATGCCCCCCTCCCCCGGCGCCCCCCTCGTGCGACTCGTGCGTCTACCCTTCACCGCCGCCGCCGTCCTCCATCATGCCCTACCCGCCGGCAGACGGCGGCCAGTTTCCC
GGCGTTGCTCCGCCGCCGCCGAACCCGATTTTACCGTACTATCCTTACTATTACTACAGTCCTCCCTCTGCTTCTGGCAAATCCGTTTCGTTCTCGTGGGAAGTTTGGCC
TTTGGGTTTCTTCATCATTCTTTGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATCTCCTCTCCATTTCCCTCACCCTCTTCCTCTTTTCACTCTCCAAATTTTCCTCTCCCTCCTCGGCAACCGCCGTCGCCAAGGATCAGACCAGCTGTTCGAT
GTGCTCAACTTGCGACAATCCCTGCCAACTTCCGCCGCCTCCGCCGCCAGTGGTTGATTGCCCGCCTCCTCCCTCGCCGCTGCCCCCTCCACCGCCAGTCCCCACTTCCG
AATGCCCCCCTCCCCCGGCGCCCCCCTCGTGCGACTCGTGCGTCTACCCTTCACCGCCGCCGCCGTCCTCCATCATGCCCTACCCGCCGGCAGACGGCGGCCAGTTTCCC
GGCGTTGCTCCGCCGCCGCCGAACCCGATTTTACCGTACTATCCTTACTATTACTACAGTCCTCCCTCTGCTTCTGGCAAATCCGTTTCGTTCTCGTGGGAAGTTTGGCC
TTTGGGTTTCTTCATCATTCTTTGCCTCTAA
Protein sequenceShow/hide protein sequence
MANLLSISLTLFLFSLSKFSSPSSATAVAKDQTSCSMCSTCDNPCQLPPPPPPVVDCPPPPSPLPPPPPVPTSECPPPPAPPSCDSCVYPSPPPPSSIMPYPPADGGQFP
GVAPPPPNPILPYYPYYYYSPPSASGKSVSFSWEVWPLGFFIILCL