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Lag0002621 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0002621
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGATA transcription factor 15-like
Genome locationchr4:44305796..44306278
RNA-Seq ExpressionLag0002621
SyntenyLag0002621
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046674.1 GATA transcription factor 15-like [Cucumis melo var. makuwa]1.7e-3969.06Show/hide
Query:  FNPSLM-AISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NNGGVI--------KSGKGKKV-GGGSLKVRVMGFGREI
        FNPSLM A+S QGL  ++ +KQR CV CR TRTPLWRAGPAGPRSLCNACGIRYRK+K   NN G +        K GKGKK+ GGGSLK+RV+  GREI
Subjt:  FNPSLM-AISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NNGGVI--------KSGKGKKV-GGGSLKVRVMGFGREI

Query:  VLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        ++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Subjt:  VLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS

XP_008451515.1 PREDICTED: GATA transcription factor 15-like [Cucumis melo]5.0e-3967.13Show/hide
Query:  FNPSLM-AISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NNGGVI------------KSGKGKKV-GGGSLKVRVMGF
        FNPSLM A+S QGL  ++ +KQR CV CR TRTPLWRAGPAGPRSLCNACGIRYRK+K   NN G +            K GKGKK+ GGGSLK+RV+  
Subjt:  FNPSLM-AISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NNGGVI------------KSGKGKKV-GGGSLKVRVMGF

Query:  GREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        GREI++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Subjt:  GREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS

XP_022959984.1 GATA transcription factor 15-like [Cucurbita moschata]1.9e-4381.89Show/hide
Query:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN-NGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE
        FNP SLMAIS+QGL+ I+PQKQRTC  CRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN NGGV KS  GKKV      VRV+G GREI+LHRAT AMAE
Subjt:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN-NGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE

Query:  NGVAEPIGEEEQAAAMLLMALSSGYVS
        NG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  NGVAEPIGEEEQAAAMLLMALSSGYVS

XP_023004687.1 GATA transcription factor 15-like [Cucurbita maxima]1.9e-4381.1Show/hide
Query:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK-NNGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE
        FNP SLMAIS+QGL+  +PQKQRTC  CRTTRTPLWRAGPAGPRSLCNACGIRYRKLK NNGGV KSG GKKV      VRV+G GREI+LHR T AMAE
Subjt:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK-NNGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE

Query:  NGVAEPIGEEEQAAAMLLMALSSGYVS
        NG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  NGVAEPIGEEEQAAAMLLMALSSGYVS

XP_023515141.1 GATA transcription factor 15-like [Cucurbita pepo subsp. pepo]4.3e-4381.1Show/hide
Query:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN-NGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE
        FNP SLMAIS+ GL+ I+PQKQRTC  CRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN NGGV KSG GKKV      VRV+  GREI+LHRAT AMAE
Subjt:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN-NGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE

Query:  NGVAEPIGEEEQAAAMLLMALSSGYVS
        NG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  NGVAEPIGEEEQAAAMLLMALSSGYVS

TrEMBL top hitse value%identityAlignment
A0A1S3BSR7 GATA transcription factor 15-like2.4e-3967.13Show/hide
Query:  FNPSLM-AISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NNGGVI------------KSGKGKKV-GGGSLKVRVMGF
        FNPSLM A+S QGL  ++ +KQR CV CR TRTPLWRAGPAGPRSLCNACGIRYRK+K   NN G +            K GKGKK+ GGGSLK+RV+  
Subjt:  FNPSLM-AISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NNGGVI------------KSGKGKKV-GGGSLKVRVMGF

Query:  GREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        GREI++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Subjt:  GREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS

A0A5A7TUD0 GATA transcription factor 15-like8.3e-4069.06Show/hide
Query:  FNPSLM-AISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NNGGVI--------KSGKGKKV-GGGSLKVRVMGFGREI
        FNPSLM A+S QGL  ++ +KQR CV CR TRTPLWRAGPAGPRSLCNACGIRYRK+K   NN G +        K GKGKK+ GGGSLK+RV+  GREI
Subjt:  FNPSLM-AISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK---NNGGVI--------KSGKGKKV-GGGSLKVRVMGFGREI

Query:  VLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        ++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Subjt:  VLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS

A0A6J1DGK8 GATA transcription factor 16-like5.0e-3769.6Show/hide
Query:  FNPSLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK-NNGGVIKSGKGKKVG-GGSLKVRVMGFGREIVLHRATAMAEN
        F+PSLM IS+Q  +  + QKQR+CVDC  TRTPLWR GPAGPRSLCNACGIR+RK K ++GGV KS KGKK+G GGSLK+ V+ F REIVLH A A   +
Subjt:  FNPSLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK-NNGGVIKSGKGKKVG-GGSLKVRVMGFGREIVLHRATAMAEN

Query:  GVAEPIGEEEQAAAMLLMALSSGYV
         VA+ IGE+EQAAAMLLMALSSGYV
Subjt:  GVAEPIGEEEQAAAMLLMALSSGYV

A0A6J1H9M3 GATA transcription factor 15-like9.4e-4481.89Show/hide
Query:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN-NGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE
        FNP SLMAIS+QGL+ I+PQKQRTC  CRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN NGGV KS  GKKV      VRV+G GREI+LHRAT AMAE
Subjt:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN-NGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE

Query:  NGVAEPIGEEEQAAAMLLMALSSGYVS
        NG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  NGVAEPIGEEEQAAAMLLMALSSGYVS

A0A6J1KR45 GATA transcription factor 15-like9.4e-4481.1Show/hide
Query:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK-NNGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE
        FNP SLMAIS+QGL+  +PQKQRTC  CRTTRTPLWRAGPAGPRSLCNACGIRYRKLK NNGGV KSG GKKV      VRV+G GREI+LHR T AMAE
Subjt:  FNP-SLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK-NNGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRAT-AMAE

Query:  NGVAEPIGEEEQAAAMLLMALSSGYVS
        NG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  NGVAEPIGEEEQAAAMLLMALSSGYVS

SwissProt top hitse value%identityAlignment
Q5HZ36 GATA transcription factor 212.3e-1072.22Show/hide
Query:  RTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK
        R C DC TT+TPLWR+GP GP+SLCNACGIR RK +
Subjt:  RTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK

Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 11.7e-1063.04Show/hide
Query:  RTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN------NGG
        R C DC TT+TPLWR+GP GP+SLCNACGIR RK +       NGG
Subjt:  RTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKN------NGG

Q8LG10 GATA transcription factor 151.9e-1750.47Show/hide
Query:  KQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGVIKSGKGKKVG-------GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAAA
        ++++C  C T++TPLWR GPAGP+SLCNACGIR RK +      +S   KK         G SLK R+M  GRE+++ R+T  AEN     +GEEEQ AA
Subjt:  KQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGVIKSGKGKKVG-------GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAAA

Query:  MLLMALS
        +LLMALS
Subjt:  MLLMALS

Q9FJ10 GATA transcription factor 162.1e-1649.11Show/hide
Query:  KQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGV--------IKSGKGKKVGGGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAA
        K++TC DC T++TPLWR GP GP+SLCNACGIR RK K  GG           SG G +  G SLK  +M  G   +  R+T   +    + +GEEEQ A
Subjt:  KQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGV--------IKSGKGKKVGGGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAA

Query:  AMLLMALSSGYV
        A+LLMALS G V
Subjt:  AMLLMALSSGYV

Q9LIB5 GATA transcription factor 173.5e-1162Show/hide
Query:  QRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGVIKSGKGKK
        +RTCVDC T RTPLWR GPAGP+SLCNACGI+ RK +     ++S + KK
Subjt:  QRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGVIKSGKGKK

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 151.4e-1850.47Show/hide
Query:  KQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGVIKSGKGKKVG-------GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAAA
        ++++C  C T++TPLWR GPAGP+SLCNACGIR RK +      +S   KK         G SLK R+M  GRE+++ R+T  AEN     +GEEEQ AA
Subjt:  KQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGVIKSGKGKKVG-------GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAAA

Query:  MLLMALS
        +LLMALS
Subjt:  MLLMALS

AT3G16870.1 GATA transcription factor 172.5e-1262Show/hide
Query:  QRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGVIKSGKGKK
        +RTCVDC T RTPLWR GPAGP+SLCNACGI+ RK +     ++S + KK
Subjt:  QRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGVIKSGKGKK

AT4G16141.1 GATA type zinc finger transcription factor family protein8.5e-1333.13Show/hide
Query:  QRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK------------------NNGGV----IKSGKGKKVG-------GGSLKV-------------
        ++TCVDC T+RTPLWR GPAGP+SLCNACGI+ RK +                  NN G+    +K+GKG+ V         G +K+             
Subjt:  QRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK------------------NNGGV----IKSGKGKKVG-------GGSLKV-------------

Query:  --------------------RVMGFGREIVLHRATAMAENGVAEPIGEEEQAAAMLLMALSSG
                            R + FG ++   + +A+ +  +   +GEEE+ AA+LLMALS G
Subjt:  --------------------RVMGFGREIVLHRATAMAENGVAEPIGEEEQAAAMLLMALSSG

AT5G49300.1 GATA transcription factor 161.5e-1749.11Show/hide
Query:  KQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGV--------IKSGKGKKVGGGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAA
        K++TC DC T++TPLWR GP GP+SLCNACGIR RK K  GG           SG G +  G SLK  +M  G   +  R+T   +    + +GEEEQ A
Subjt:  KQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGV--------IKSGKGKKVGGGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEEQAA

Query:  AMLLMALSSGYV
        A+LLMALS G V
Subjt:  AMLLMALSSGYV

AT5G56860.1 GATA type zinc finger transcription factor family protein1.6e-1172.22Show/hide
Query:  RTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK
        R C DC TT+TPLWR+GP GP+SLCNACGIR RK +
Subjt:  RTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCAATCCATCGCTAATGGCCATCTCGAGCCAGGGTCTGGTCGGTATCGATCCTCAGAAACAGAGGACCTGCGTCGACTGTCGCACCACCAGAACCCCCCTCTG
GAGAGCCGGTCCTGCCGGCCCAAGGTCGCTGTGCAATGCGTGTGGGATAAGATACAGGAAGCTGAAGAACAATGGCGGGGTGATCAAGAGCGGGAAGGGGAAGAAAGTGG
GAGGAGGATCGTTGAAGGTGAGAGTGATGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCGACGGCGATGGCGGAAAATGGAGTTGCAGAGCCAATCGGAGAAGAAGAA
CAGGCGGCGGCGATGCTTCTTATGGCTTTATCTTCCGGCTATGTATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCAATCCATCGCTAATGGCCATCTCGAGCCAGGGTCTGGTCGGTATCGATCCTCAGAAACAGAGGACCTGCGTCGACTGTCGCACCACCAGAACCCCCCTCTG
GAGAGCCGGTCCTGCCGGCCCAAGGTCGCTGTGCAATGCGTGTGGGATAAGATACAGGAAGCTGAAGAACAATGGCGGGGTGATCAAGAGCGGGAAGGGGAAGAAAGTGG
GAGGAGGATCGTTGAAGGTGAGAGTGATGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCGACGGCGATGGCGGAAAATGGAGTTGCAGAGCCAATCGGAGAAGAAGAA
CAGGCGGCGGCGATGCTTCTTATGGCTTTATCTTCCGGCTATGTATCATAA
Protein sequenceShow/hide protein sequence
MAFNPSLMAISSQGLVGIDPQKQRTCVDCRTTRTPLWRAGPAGPRSLCNACGIRYRKLKNNGGVIKSGKGKKVGGGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEE
QAAAMLLMALSSGYVS